SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11612
Annotation
PREDICTED:_neuralized-like_protein_2_[Amyelois_transitella]
Location in the cell
Mitochondrial   Reliability : 2.068
 

Sequence

CDS
ATGCTATCGAGATTCCATCATTATCATGGCTCGAATATTATATTGTTCGAAGAAAATACAGTTGCCTACAGAAAAGCTAGTTTTGCACACGGCTTGACTTTTAGTGAAAAACCCCTTCTACCTGGTGAAATATTTCTAGTAGAAATTGAAAAAACCGAAAGAGGATGGAGTGGTCATATGCGGCTCGGGTTAACACTTCTTGAGCCACAAGCAGCGGCTCTGGGTGACAAAGGATTGCCTCAGTATGCGCTACCAGATCTCGCTAACAATGGGCGATGGGAAAACGAGCCGCGGGTTTCGGTCCTAGGCGATGGTCATGTAGTAAAAACGCCACGTGGTTACATATCTAAGATGATTTTAAAGCCACAGACTGTCTCACAGAATGGAACACCCCAAGGTATTTTACCTATGGACGCTGGCAGCCGTATTGGAGTAATGTTTGTTCCTTGTCCTAAACTTAATAAAAATGACCAAGACTTAGCTGAAATGCACTTTATAATTAATGGTGAAGATCAAGGCCCTTGTACTAAATCGATACCCTACACAAGAGGTCTTTTACATGCAGTCGTTGATGTCTATGGTACAACAAAACAAGTGAAGATTGTACAACTTTATGGAGTGAAATCTCTTCAGATTATTTGCAGGGATGCAATACTGCAGAATGTGAAAAATGGTTCGGTGAAATCTTTACCCTTACCTAAAAGCCTAAAAGACTTTTTGTTATCATAA
Protein
MLSRFHHYHGSNIILFEENTVAYRKASFAHGLTFSEKPLLPGEIFLVEIEKTERGWSGHMRLGLTLLEPQAAALGDKGLPQYALPDLANNGRWENEPRVSVLGDGHVVKTPRGYISKMILKPQTVSQNGTPQGILPMDAGSRIGVMFVPCPKLNKNDQDLAEMHFIINGEDQGPCTKSIPYTRGLLHAVVDVYGTTKQVKIVQLYGVKSLQIICRDAILQNVKNGSVKSLPLPKSLKDFLLS

Summary

EMBL
NWSH01004210    PCG65349.1    GDQN01009813    GDQN01002490    JAT81241.1    JAT88564.1    + More
ODYU01004170    SOQ43755.1    KQ460772    KPJ12488.1    KQ459185    KPJ03278.1    AGBW02014995    OWR40758.1    JTDY01001758    KOB72965.1    KK852779    KDR16695.1    GAIX01009136    JAA83424.1    GDAI01000691    JAI16912.1    PYGN01001238    PSN36388.1    NEVH01025130    PNF15932.1    GFDL01009884    JAV25161.1    CH478035    EAT34272.1    DS232082    EDS34324.1    GAPW01003573    JAC10025.1    GGFM01007507    MBW28258.1    GGFK01008393    MBW41714.1    GGFJ01008642    MBW57783.1    ADMH02000010    ETN68100.1    GDKW01000243    JAI56352.1    GAHY01001675    JAA75835.1    GFTR01004342    JAW12084.1    GBGD01002540    JAC86349.1    GGFJ01008641    MBW57782.1    ATLV01016846    KE525120    KFB41634.1    GECL01001468    JAP04656.1    GBBI01000564    JAC18148.1    GECU01002801    JAT04906.1    GAMD01000056    JAB01535.1    AXCM01004220    AXCN02000824    GBHO01040707    GBHO01040702    GBRD01007172    GBRD01007171    GDHC01012540    JAG02897.1    JAG02902.1    JAG58649.1    JAQ06089.1    AAAB01008984    EAA14752.4    GEDC01019506    JAS17792.1    APCN01003737    GBYB01009100    JAG78867.1    GANO01002770    JAB57101.1    GBXI01013927    JAD00365.1    KZ288193    PBC34054.1    GDHF01010971    JAI41343.1    GAKP01004987    JAC53965.1    KQ435701    KOX80356.1    CCAG010018997    KQ420859    KOF79073.1    GL453395    EFN76015.1    KQ414986    KOC58998.1    KK107128    EZA58268.1    ADTU01010651    ADTU01010652    KQ762207    OAD56019.1    GL888730    EGI58237.1    KQ981225    KYN44369.1    GAMC01008533    JAB98022.1    GL769168    EFZ10640.1    GEZM01087615    JAV58578.1    QOIP01000006    RLU21573.1    KK854574    PTY17000.1    KQ977412    KYN02889.1    KQ435007    KZC13515.1    CH940648    EDW60053.1    CH933808    EDW08544.1    KB202284    ESO91073.1    GEMB01002332    JAS00851.1    CH480838    EDW49252.1    CH954179    EDV57064.1    CM000362    CM002911    EDX08610.1    KMY96422.1    CM000158    EDW92597.1    AE013599    AAF47265.3    CH916367    EDW01622.1    LBMM01004522    KMQ92326.1    KQ976506    KYM82839.1    KQ971352    EFA07350.1    CH902619    EDV37137.1    KQ978966    KYN26905.1    KQ982665    KYQ52601.1    CP012524    ALC40889.1   
Pfam
PF07525   SOCS_box        + More
PF07177   Neuralized
PF00096   zf-C2H2
Interpro
IPR001496   SOCS_box        + More
IPR006573   NHR_dom       
IPR037962   Neuralized       
IPR036036   SOCS_box-like_dom_sf       
IPR013087   Znf_C2H2_type       
IPR036236   Znf_C2H2_sf       
SUPFAM
SSF158235   SSF158235        + More
SSF57667   SSF57667       
PDB
4KG0     E-value=9.45473e-10,     Score=149

Ontologies

Topology

Length:
242
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00152
Exp number, first 60 AAs:
0.000830000000000001
Total prob of N-in:
0.03251
outside
1  -  242
 
 

Population Genetic Test Statistics

Pi
140.382065
Theta
183.70847
Tajima's D
-0.572949
CLR
342.045784
CSRT
0.224588770561472
Interpretation
Uncertain
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