Gene

KWMTBOMO11605

Pre Gene Modal

BGIBMGA004014

Annotation

PREDICTED:_collagen_type_IV_alpha-3-binding_protein_[Papilio_xuthus]

Location

Bomo_Chr19(-):9895843-9937918      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.879 Nuclear   Reliability : 2.396

CDS

ATGATTGACGAAAACATCACAGTCAGCGATAGTTCTGATTTAGAAGAGGGCGGAACTCCTGAACTTCGCGGATACCTAAGCAAATGGACAAACTATATACACGGCTGGCAGGATAGATTTATTGTCCTTAAGGATTCTACTTTATCTTATTACAAGAATGAACTCGAAAGCAATTTAGGATGCCGCGGTGCCTTATGTCTGAAAAAAGCTAAAGTCAAGCCTCACGAGTTTGATGACTGTAGATTCGATGTTTCTGTTAGCGACTGCGTTTGGTACTTAAGAGCGTCTAATCCAGAGGAGAAACAGCAATGGATTGATATTCTAGAGTCTTTCAAAGTTGAATCAGGGTACGGTACAAGTTCAGATAGTAGCTCAAATGGAGGAGGTCTTCAAAGGCATGGTTCTGCCACTTCACTACAGTCTACAGGGTCACACGGTCACTCTACACGTCGCCTCACAGAGAAAATCACTGAGCTGGAAACGTACAATGAGCTTCTGTCAAAGCAAGCAATACAACTGCAACAATACTTTGATATGTGTATCGATTCTTACCCAAAAATTGATGATGCTAATGATGCGATAGATGCTGTTAAATTAGCCGATGGCAACGATCTCAGAGTGCACGCAGGCGAAGTGCGGGCGACGAGTACGTCGTTCCGAGCGACGTGCGGCGCGACGGTGGCGACGCTGCAGCACTGCGTCGAACTGTTGCGTCGACGCGAGAAGCAGGCGAGACAAGCCGAGGACTTATATATGGCTCTCAAGACTCAACTAAATGAAGCGAGATTAGCATCCAAACCCGGACCAGACCACGAGGAGGGTCCACACTCCACCCTCCCCGACGACGAGTTCCACGATGCGATCGAGACAGGCTTCGACAAAATGGAGGAGGAGCGGTGCACAAGGGTGGTGCCGACCGTACACACCCGCGACCAGATTGAATTGCCACCGCCGGCCATCGATAACCGTCTCACCGTACATCCCCTGTGGCCGGAGATTGACAGGATATCGACAGAACAAATACAGGCCGCGTTCGAAGGTGTCGGCGGTGAAATCGGGTGGCAGTTGTTTGCTGAAGAGGGGGACATGAGGATGTACAGAAGGGAAGTGGAAGTCGACGGCATGGTGATGGATCCTCTGAAGGCGATGCACAAGGTGCGTGGCGTCTCTGCGCGTGAAATGTGTCATTACTTCTTCAACCCGAGATACAGATATGAATGGGAAACTACCCTAGAACAGATGACGATAGTAGAAGAGATCTCATCAGATGCGCTGGTGTTCCACCAAACGTTCAAGCGGATCTGGCCGGCGTCGCAGCGGGACGCACTGTTCTGGTCACACGTGAGGGCCTCCAGCGAAAACACCTTCGCTGTAACCAACCATTCCACTACCAACACGGAATACCCAGCGAACTCTAGTGCGTGCATCCGTTTGTTCGTGACCGTGTGTCTGGCTTGCCGCAGCACGTACCCGGCCGGCGAGCAGCCCACGCGGGATAATATCACCACGAGCATCGCCTATTGCAGTACAGTGAACCCTGGAGGTTGGGCACCGGCCGGCGTGCTCCGTGCCGTGTACAAACGTGAATATCCCAAGTTCCTGAAGCGTTTCACCGGCTACGTCGTCGACCAGTGCAAGGACAAACCTCTCGCCATCTAG

Protein

MIDENITVSDSSDLEEGGTPELRGYLSKWTNYIHGWQDRFIVLKDSTLSYYKNELESNLGCRGALCLKKAKVKPHEFDDCRFDVSVSDCVWYLRASNPEEKQQWIDILESFKVESGYGTSSDSSSNGGGLQRHGSATSLQSTGSHGHSTRRLTEKITELETYNELLSKQAIQLQQYFDMCIDSYPKIDDANDAIDAVKLADGNDLRVHAGEVRATSTSFRATCGATVATLQHCVELLRRREKQARQAEDLYMALKTQLNEARLASKPGPDHEEGPHSTLPDDEFHDAIETGFDKMEEERCTRVVPTVHTRDQIELPPPAIDNRLTVHPLWPEIDRISTEQIQAAFEGVGGEIGWQLFAEEGDMRMYRREVEVDGMVMDPLKAMHKVRGVSAREMCHYFFNPRYRYEWETTLEQMTIVEEISSDALVFHQTFKRIWPASQRDALFWSHVRASSENTFAVTNHSTTNTEYPANSSACIRLFVTVCLACRSTYPAGEQPTRDNITTSIAYCSTVNPGGWAPAGVLRAVYKREYPKFLKRFTGYVVDQCKDKPLAI

Uniprot

A0A194QIK7   A0A0N1IDF5   A0A2A4JHR7   A0A2M4BII1   A0A182U1V8   A0A182KQA6   + More
A0A2C9GPI7   A0A182VBG3   A0A2M3Z7E0   Q5TWP3   A0A023EVC7   A0A2M4AJZ7   A0A2M4AJR3   A0A1L8DMF9   A0A2M4CUU7   A0A2M4CUE5   A0A182YEH8   A0A1L8DMA7   A0A182QKK5   A0A182JB80   A0A2P8YYJ8   D6WR07   A0A151HYC6   E2BKT8   E2A0T0   A0A195ES80   A0A154PND9   A0A0L7RBJ3   A0A026WKM2   A0A151X559   A0A151IC13   F4X4T6   E9J4P7   A0A1Y1MER9   A0A088AJ90   A0A2A3ETZ5   A0A310S662   A0A1B6ECM8   A0A0A9YTN1   A0A0K8SCK0   A0A1B6EKV6   A0A1B6E8C9   J3JY04   A0A1W4WM14   Q9Y128   B4PG56   B3NFV1   A0A0K8U4A9   B4HJF4   A0A0J9RR46   A0A0A1WWK4   A0A034WQ32   B4L944   A0A1W4USF6   A0A0L0CAD6   B4LCA3   B4J205   B3M9P2   A0A1J1HZD1   A0A3B0KLS5   W8BMR1   Q29F82   A0A336MKJ2   A0A1A9UCS9   A0A1A9Z820   A0A0M4EKZ1   B4MKS1   E9FT92   A0A1A9Y4S9   A0A1B0BE36   E0VRU4   A0A1A9WEI0   A0A1B0FQH9   T1IZW2   A0A2R5LBJ3   A0A131YZD2   A0A224Z0Y8   A0A293LZA7   A0A131XXK6   A0A1B6LU40   A0A2M4ALL9   L7MJP7   A0A2I9LNW1   A0A1E1X351   A0A3S3SBE5   A0A226F0T4   T1L1M9   A0A1B6IN68   X1WIF3   A0A0K8TMX6   A0A2S2Q883   A0A3B4BV38   A0A3P8VRE4   A0A3B3BGZ8   A0A0A1WLP4   A0A3B3T258   A0A2I4CWY0   M3XH89   A0A060X7M1  

Pubmed

26354079    20966253    12364791    14747013    17210077    24945155    + More
25244985    29403074    18362917    19820115    20798317    24508170    30249741    21719571    21282665    28004739    25401762    26823975    22516182    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17994087    17550304    22936249    25830018    25348373    26108605    24495485    15632085    18057021    21292972    20566863    26830274    28797301    25576852    29248469    28503490    26369729    24487278    29451363    29240929    9215903    24755649   

EMBL

KQ459185    KPJ03286.1    KQ460772    KPJ12480.1    NWSH01001346    PCG71597.1    + More
GGFJ01003683    MBW52824.1    APCN01000155    GGFM01003695    MBW24446.1    AAAB01008807    EAL41877.3    GAPW01000662    JAC12936.1    GGFK01007780    MBW41101.1    GGFK01007683    MBW41004.1    GFDF01006431    JAV07653.1    GGFL01004763    MBW68941.1    GGFL01004762    MBW68940.1    GFDF01006481    JAV07603.1    AXCN02000424    PYGN01000284    PSN49326.1    KQ971351    EFA06537.1    KQ976730    KYM76444.1    GL448826    EFN83687.1    GL435626    EFN72983.1    KQ981993    KYN31083.1    KQ434977    KZC12828.1    KQ414617    KOC68234.1    KK107198    QOIP01000007    EZA55629.1    RLU20314.1    KQ982522    KYQ55464.1    KQ978069    KYM97346.1    GL888679    EGI58509.1    GL768112    EFZ12193.1    GEZM01036286    JAV82825.1    KZ288185    PBC34974.1    KQ768636    OAD53087.1    GEDC01001600    JAS35698.1    GBHO01009161    JAG34443.1    GBRD01014809    GDHC01017079    JAG51017.1    JAQ01550.1    GECZ01031238    JAS38531.1    GEDC01003096    JAS34202.1    BT128127    AEE63088.1    AF145644    AE014296    AAD38619.1    AAF50454.1    AHN58003.1    CM000159    EDW93200.1    CH954178    EDV50713.1    GDHF01031174    JAI21140.1    CH480815    EDW40678.1    CM002912    KMY98336.1    GBXI01010853    JAD03439.1    GAKP01003084    JAC55868.1    CH933816    EDW17219.1    JRES01000681    KNC29221.1    CH940647    EDW68748.1    CH916366    EDV95930.1    CH902618    EDV39048.1    CVRI01000035    CRK92890.1    OUUW01000012    SPP87529.1    GAMC01006484    GAMC01006483    JAC00073.1    CH379067    EAL31249.2    UFQT01001407    SSX30415.1    CP012525    ALC44938.1    CH963847    EDW72777.2    KRF97632.1    GL732524    EFX89333.1    JXJN01012777    DS235562    EEB16100.1    CCAG010008844    JH431728    GGLE01002601    MBY06727.1    GEDV01005296    JAP83261.1    GFPF01011679    MAA22825.1    GFWV01009314    MAA34043.1    GEFM01004379    JAP71417.1    GEBQ01012793    JAT27184.1    GGFK01008350    MBW41671.1    GACK01000844    JAA64190.1    GFWZ01000082    MBW20072.1    GFAC01005478    JAT93710.1    NCKU01001105    RWS13073.1    LNIX01000001    OXA62811.1    CAEY01000920    GECU01019341    JAS88365.1    ABLF02037610    GDAI01002112    JAI15491.1    GGMS01004736    MBY73939.1    GBXI01014847    JAC99444.1    AFYH01173700    AFYH01173701    AFYH01173702    AFYH01173703    AFYH01173704    AFYH01173705    AFYH01173706    AFYH01173707    AFYH01173708    AFYH01173709    FR904892    CDQ73289.1   

Proteomes

UP000053268    UP000053240    UP000218220    UP000075902    UP000075882    UP000075840    + More
UP000075903    UP000007062    UP000076408    UP000075886    UP000075880    UP000245037    UP000007266    UP000078540    UP000008237    UP000000311    UP000078541    UP000076502    UP000053825    UP000053097    UP000279307    UP000075809    UP000078542    UP000007755    UP000005203    UP000242457    UP000192223    UP000000803    UP000002282    UP000008711    UP000001292    UP000009192    UP000192221    UP000037069    UP000008792    UP000001070    UP000007801    UP000183832    UP000268350    UP000001819    UP000078200    UP000092445    UP000092553    UP000007798    UP000000305    UP000092443    UP000092460    UP000009046    UP000091820    UP000092444    UP000285301    UP000198287    UP000015104    UP000007819    UP000261440    UP000265120    UP000261560    UP000261540    UP000192220    UP000008672    UP000193380   

PRIDE

Q9Y128   

Pfam

PF00169   PH        + More
PF01852   START
PF00069   Pkinase
PF15409   PH_8

Interpro

IPR023393   START-like_dom_sf        + More
IPR011993   PH-like_dom_sf       
IPR001849   PH_domain       
IPR002913   START_lipid-bd_dom       
IPR041952   STARD11_START       
IPR011009   Kinase-like_dom_sf       
IPR017441   Protein_kinase_ATP_BS       
IPR000719   Prot_kinase_dom       
IPR041680   PH_8       

SUPFAM

SSF56112   SSF56112       

Gene 3D

2.30.29.30     3.30.530.20    

CDD

cd08872  START_STARD11-like

ProteinModelPortal

A0A194QIK7   A0A0N1IDF5   A0A2A4JHR7   A0A2M4BII1   A0A182U1V8   A0A182KQA6   + More
A0A2C9GPI7   A0A182VBG3   A0A2M3Z7E0   Q5TWP3   A0A023EVC7   A0A2M4AJZ7   A0A2M4AJR3   A0A1L8DMF9   A0A2M4CUU7   A0A2M4CUE5   A0A182YEH8   A0A1L8DMA7   A0A182QKK5   A0A182JB80   A0A2P8YYJ8   D6WR07   A0A151HYC6   E2BKT8   E2A0T0   A0A195ES80   A0A154PND9   A0A0L7RBJ3   A0A026WKM2   A0A151X559   A0A151IC13   F4X4T6   E9J4P7   A0A1Y1MER9   A0A088AJ90   A0A2A3ETZ5   A0A310S662   A0A1B6ECM8   A0A0A9YTN1   A0A0K8SCK0   A0A1B6EKV6   A0A1B6E8C9   J3JY04   A0A1W4WM14   Q9Y128   B4PG56   B3NFV1   A0A0K8U4A9   B4HJF4   A0A0J9RR46   A0A0A1WWK4   A0A034WQ32   B4L944   A0A1W4USF6   A0A0L0CAD6   B4LCA3   B4J205   B3M9P2   A0A1J1HZD1   A0A3B0KLS5   W8BMR1   Q29F82   A0A336MKJ2   A0A1A9UCS9   A0A1A9Z820   A0A0M4EKZ1   B4MKS1   E9FT92   A0A1A9Y4S9   A0A1B0BE36   E0VRU4   A0A1A9WEI0   A0A1B0FQH9   T1IZW2   A0A2R5LBJ3   A0A131YZD2   A0A224Z0Y8   A0A293LZA7   A0A131XXK6   A0A1B6LU40   A0A2M4ALL9   L7MJP7   A0A2I9LNW1   A0A1E1X351   A0A3S3SBE5   A0A226F0T4   T1L1M9   A0A1B6IN68   X1WIF3   A0A0K8TMX6   A0A2S2Q883   A0A3B4BV38   A0A3P8VRE4   A0A3B3BGZ8   A0A0A1WLP4   A0A3B3T258   A0A2I4CWY0   M3XH89   A0A060X7M1  

PDB

5JJD     E-value=9.95593e-57,     Score=559

KEGG

101736873    K08283 collagen type IV alpha-3-binding protein | (RefSeq) collagen type IV alpha-3-binding protein

GO

GO:0008289   GO:0005581   GO:0004674   GO:0120009   GO:0035627   GO:0005829   GO:0070273   GO:0035621   GO:1902388   GO:1902387   GO:0005794   GO:0097001   GO:0005783   GO:0035620   GO:0006665   GO:0005524   GO:0004672   GO:0016740   GO:0007165   GO:0008081   GO:0015074   GO:0003684   GO:0005634   GO:0042162   GO:0043564   GO:0006418   GO:0003824  

Length:

552

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.05213

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00171

outside

1  -  552

 

 

Pi

228.951432

Theta

178.777933

Tajima's D

1.230399

CLR

0.420707

CSRT

0.713964301784911

Interpretation

Uncertain