Gene

KWMTBOMO11599

Annotation

PREDICTED:_uncharacterized_protein_LOC106720343_[Papilio_machaon]

Location

Bomo_Chr19(-):9484033-9485453      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.902

CDS

ATGTTAGGTATACGAGGTAATGCTTTGTTGGATACGGGAGCTAAGAGTAGCGTTGCCGGAGCGTTGCTTTATGAATTGCTGTTAAAGCATAACCATCCGTGTGAGGAAACCAGGCGTCGGGTGAGGCTTGCAGACGGTTCCGCGCGCACCCGCCGAGTTTTGCTCACTACTCTAGAAGTAAGGATAAGTCCCGAAAGGTCAGTAACCCTTGAATTTACTGTTTTTCCAGATGCTCAAAATAATGAAACTTTGCTTGGCATGGATTTTTTGGTGGCGGCAGGTATTGTGCTTGACTTTGCTTCATCCACTTGGCATTTTTCGGGAAAACGGGTTACCTATCCAATTGAATATGAGTGCCCTAAGCCATGCATGTTTGCTTCTACTGCTGACTTCCTGCGTGATGATAAGGGTTCTATGCTTGGCTCCGATGAACGGCAGCAGCTATCACATTTATTGCAGGAGAATGGAGACATCTTTAGGGTGGGGGGAGCCCCAACCCTTTACGCCGAGCACCACATTGATACCGGTGATCATCCGCCTATATCGGTACCGCCGTATAGGCTCACTCCTGTGCTTCAACAGCGAGGAGAGGTTCTCGCAATCGATTTGTTCGGGCCACTGCCAGAAGGAGAGCAGGGGGAGCGATGGGTACTCCTGGTAGAGGATGTAGCTACAAGATGGGTAGAACTCTACGCACTTGTTGATGCCACCGCCGTGGCTTGCTCCCGAGTCCTACTGGAAGAGTATTTCCTTCGTTATGGCTTGCTTATGCGTCTAGGGGTGTAA

Protein

MLGIRGNALLDTGAKSSVAGALLYELLLKHNHPCEETRRRVRLADGSARTRRVLLTTLEVRISPERSVTLEFTVFPDAQNNETLLGMDFLVAAGIVLDFASSTWHFSGKRVTYPIEYECPKPCMFASTADFLRDDKGSMLGSDERQQLSHLLQENGDIFRVGGAPTLYAEHHIDTGDHPPISVPPYRLTPVLQQRGEVLAIDLFGPLPEGEQGERWVLLVEDVATRWVELYALVDATAVACSRVLLEEYFLRYGLLMRLGV

Uniprot

A0A2A4IYB3   A0A2A4IZM0   V5I885   A0A1Y1NDK0   A0A0L7LAV6   A0A1E1W8R6   + More
A0A1E1W9B8   A0A224XHC7   A0A2W1B5D1   A0A2A4JSD7   A0A2A4JQ53   A0A2A4J1V9   A0A2A4K1D8   A0A2A4JII7   A0A2A4K7C7   A0A2A4IY04   A0A2A4J1D1   A0A0L7KNY7   A0A2A4J2W5   A0A2A4J108   A0A224X7A2   A0A0X3PJ55  

Pubmed

28004739    26227816    28756777   

EMBL

NWSH01004870    PCG64629.1    PCG64630.1    GALX01005125    JAB63341.1    GEZM01007731    + More
JAV94970.1    JTDY01001924    KOB72534.1    GDQN01007676    JAT83378.1    GDQN01007488    JAT83566.1    GFTR01008566    JAW07860.1    KZ150309    PZC71472.1    NWSH01000724    PCG74608.1    NWSH01000841    PCG73896.1    NWSH01004191    PCG65373.1    NWSH01000267    PCG77879.1    NWSH01001444    PCG71222.1    NWSH01000054    PCG80147.1    NWSH01004745    PCG64715.1    NWSH01004127    PCG65468.1    JTDY01007689    KOB65012.1    NWSH01003415    PCG66341.1    NWSH01003845    PCG65765.1    GFTR01008089    JAW08337.1    GEEE01011254    JAP51971.1   

Proteomes

UP000218220    UP000037510   

Pfam

PF00078   RVT_1        + More
PF17921   Integrase_H2C2
PF00665   rve
PF17917   RT_RNaseH
PF00077   RVP

Interpro

IPR021109   Peptidase_aspartic_dom_sf        + More
IPR036875   Znf_CCHC_sf       
IPR000477   RT_dom       
IPR036397   RNaseH_sf       
IPR041588   Integrase_H2C2       
IPR041373   RT_RNaseH       
IPR012337   RNaseH-like_sf       
IPR001878   Znf_CCHC       
IPR001584   Integrase_cat-core       
IPR001969   Aspartic_peptidase_AS       
IPR018061   Retropepsins       

SUPFAM

SSF50630   SSF50630        + More
SSF57756   SSF57756       
SSF53098   SSF53098       

Gene 3D

2.40.70.10     3.30.420.10    

ProteinModelPortal

A0A2A4IYB3   A0A2A4IZM0   V5I885   A0A1Y1NDK0   A0A0L7LAV6   A0A1E1W8R6   + More
A0A1E1W9B8   A0A224XHC7   A0A2W1B5D1   A0A2A4JSD7   A0A2A4JQ53   A0A2A4J1V9   A0A2A4K1D8   A0A2A4JII7   A0A2A4K7C7   A0A2A4IY04   A0A2A4J1D1   A0A0L7KNY7   A0A2A4J2W5   A0A2A4J108   A0A224X7A2   A0A0X3PJ55  

KEGG

105842983    no KO assigned | (RefSeq) uncharacterized LOC105842983

GO

GO:0008270   GO:0003676   GO:0015074   GO:0004190   GO:0003964   GO:0008152   GO:0005524   GO:0000723   GO:0003684   GO:0005634   GO:0042162   GO:0043564   GO:0006418   GO:0003824  

Length:

261

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.27477

Exp number, first 60 AAs:

0.0028

Total prob of N-in:

0.01299

outside

1  -  261

 

 

Pi

251.12277

Theta

156.423603

Tajima's D

2.904035

CLR

0

CSRT

0.975601219939003

Interpretation

Uncertain