Gene

KWMTBOMO11598

Annotation

endonuclease-reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr19(-):9479983-9480803      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 1.944

CDS

ATGTATGGTAGCGAAACATGGGCGGCAACCAAAAGGAACGTGCATACCATTCAAGTTGCTGAAATGAAAATGCTGAGGTCAATGTGCGGCGTGACTATGCTCAATAAAATCTGTAACGAGTACGTGCGCGGAAGCCTCGGTGTACGGGACATCACCGACAAGATGCCGGAGAGTAGCCTGAGATGGTATGGTCAAGTAAAAAATAAGCCACCTGACTACGTCAAAAATTTAGCGCTACTGCTCGACCTCCCCGGTCGGAGACCTAGAGATAGACCCAAGACAAGATGGAAGGATATAGTGCTGAAGGACAAAAGTGAATGCAATGTCGCTGACGAGGATGTCGAAGACAGAGCGAAGTGGAGGAGTAAAGTGAGGAAAGCTGACCCCACCACCATGTGGGATAAATAG

Protein

MYGSETWAATKRNVHTIQVAEMKMLRSMCGVTMLNKICNEYVRGSLGVRDITDKMPESSLRWYGQVKNKPPDYVKNLALLLDLPGRRPRDRPKTRWKDIVLKDKSECNVADEDVEDRAKWRSKVRKADPTTMWDK

Uniprot

D7F169   C6Y4D5   A0A016VS97   A0A183FXH7   A0A3P7Z2B4   A0A016WFX2   + More
A0A183G637   A0A3P8A2N8   A0A016UE98   A0A0N4WFX2   A0A016VNT7   A0A2G9U5Q2   A0A183GA74   A0A3P8F0W9   K1KXQ8   A0A2I0B7E5   A0A016SIC4   A0A016S9A4   A0A016VTA3   A0A016S5Y5   A0A016SNX4   A0A016UBL7   A0A2I0A7U6   A0A2H9ZV89   A0A016VFS4   A0A016VD78   A0A016SDN2   A0A016VLS9   A0A016TQG5   A0A183F2R5   A0A3P7U320   A0A2I0A8C5   A0A016VQL7   A0A2I0BFB2   A0A2I0BDY2   A0A2I0A7B2   A0A183F3S2   A0A3P7UA05   A0A016WHD5   A0A016SAQ3   W6NHZ4   W6NPY2   W6NF39   A0A016VGS9   W6NHB7   A0A2H9ZWL9   W6NDS5   A0A183G016   A0A3P8DTJ1   A0A016VG09   A0A016TKX6   A0A016TSY7   A0A2I0A4R0   A0A016T1D4   A0A016TK27   A0A016T3U9   A0A2I0A8G9   A0A016TQJ7   W6NJ26   A0A183GHA4   A0A3P8C8L5   A0A016VT97   A0A3B3HQB6   A0A016V8D6   A0A183GPW8   A0A3P8ETQ0   A0A016UUZ0   A0A016SDV3   A0A183FT77   A0A3P8AAR6   A0A016SKB8   A0A183GGD8   A0A3P8D1Q5   A0A016V9U6   A0A2G9U478   A0A016WBG8   A0A016WAY5   A0A016U5W8   A0A016VCI1   A0A183G762   A0A3P8A609   A0A183F4B8   A0A3P7UF10   A0A016W910   W6NRE4   I7K8L3   A0A016SG79   A0A183GB20   A0A3P8BZ43   A0A016VMH1   A0A016VLP4   A0A016VVS4   A0A016TLV5   A0A016T5F5   A0A3P9IMA9  

Pubmed

20470440    25730766    23144386    28902843    17554307   

EMBL

FJ265554    ADI61822.1    CU462842    CBA11992.1    JARK01001341    EYC29922.1    + More
UZAH01027842    VDO95476.1    JARK01000336    EYC38182.1    UZAH01029822    VDP08057.1    JARK01001380    EYC13251.1    UZAF01001415    UZAF01017114    VDO08263.1    VDO38063.1    JARK01001343    EYC28702.1    KZ348915    PIO65553.1    UZAH01030983    VDP13266.1    AMGM01000184    EKB47241.1    KZ451907    PKA63681.1    JARK01001560    EYB90061.1    JARK01001602    EYB87210.1    EYC29983.1    JARK01001630    EYB85649.1    JARK01001534    EYB92051.1    JARK01001384    EYC12232.1    KZ452013    PKA51585.1    KZ453539    PKA47214.1    JARK01001347    EYC25573.1    EYC25574.1    JARK01001582    EYB88451.1    EYC28385.1    JARK01001481    JARK01001420    EYB96960.1    EYC04966.1    UZAH01000306    VDO18824.1    KZ452012    PKA51786.1    JARK01001342    EYC29596.1    KZ451885    PKA66495.1    KZ451888    PKA66013.1    PKA51430.1    UZAH01000708    VDO19197.1    JARK01000281    EYC39011.1    JARK01001594    EYB87753.1    CAVP010062000    CDL96883.1    CAVP010057772    CDL94282.1    CAVP010059598    CDL95931.1    JARK01001346    EYC26232.1    CAVP010061241    CDL96703.1    KZ453102    PKA47709.1    CAVP010058665    CDL95025.1    UZAH01028345    VDO99512.1    EYC26231.1    JARK01001430    EYC03360.1    JARK01001415    EYC05905.1    KZ452023    PKA50536.1    JARK01001486    EYB96487.1    EYC03359.1    JARK01001478    EYB97301.1    PKA51832.1    JARK01001422    EYC04723.1    CAVP010061812    CAVP010061814    CAVP010061816    CDL96846.1    CDL96848.1    CDL96850.1    UZAH01033489    VDP29161.1    EYC30277.1    JARK01001351    EYC23521.1    UZAH01036764    VDP46995.1    JARK01001362    EYC18796.1    EYB88469.1    UZAH01027034    VDO87933.1    JARK01001546    EYB91138.1    UZAH01033088    VDP26174.1    JARK01001350    EYC24439.1    KZ350014    PIO64310.1    JARK01000474    EYC36617.1    JARK01000458    EYC36771.1    JARK01001392    EYC10247.1    EYC24438.1    UZAH01030113    VDP09327.1    UZAH01000951    VDO19393.1    JARK01000539    EYC36061.1    CAVP010058483    CDL94742.1    HE805490    CCH50976.1    JARK01001564    EYB89718.1    UZAH01031239    VDP14558.1    JARK01001344    EYC28222.1    EYC28221.1    JARK01001340    EYC31495.1    JARK01001428    EYC03715.1    JARK01001472    EYB97834.1   

Proteomes

UP000024635    UP000050761    UP000038042    UP000268014    UP000004478    UP000236161    + More
UP000025227    UP000001038    UP000265200   

PRIDE

D7F169   

Pfam

PF00078   RVT_1        + More
PF03372   Exo_endo_phos

Interpro

IPR000477   RT_dom        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR005135   Endo/exonuclease/phosphatase       
IPR027124   Swc5/CFDP2       

SUPFAM

SSF56219   SSF56219       

Gene 3D

3.60.10.10    

ProteinModelPortal

D7F169   C6Y4D5   A0A016VS97   A0A183FXH7   A0A3P7Z2B4   A0A016WFX2   + More
A0A183G637   A0A3P8A2N8   A0A016UE98   A0A0N4WFX2   A0A016VNT7   A0A2G9U5Q2   A0A183GA74   A0A3P8F0W9   K1KXQ8   A0A2I0B7E5   A0A016SIC4   A0A016S9A4   A0A016VTA3   A0A016S5Y5   A0A016SNX4   A0A016UBL7   A0A2I0A7U6   A0A2H9ZV89   A0A016VFS4   A0A016VD78   A0A016SDN2   A0A016VLS9   A0A016TQG5   A0A183F2R5   A0A3P7U320   A0A2I0A8C5   A0A016VQL7   A0A2I0BFB2   A0A2I0BDY2   A0A2I0A7B2   A0A183F3S2   A0A3P7UA05   A0A016WHD5   A0A016SAQ3   W6NHZ4   W6NPY2   W6NF39   A0A016VGS9   W6NHB7   A0A2H9ZWL9   W6NDS5   A0A183G016   A0A3P8DTJ1   A0A016VG09   A0A016TKX6   A0A016TSY7   A0A2I0A4R0   A0A016T1D4   A0A016TK27   A0A016T3U9   A0A2I0A8G9   A0A016TQJ7   W6NJ26   A0A183GHA4   A0A3P8C8L5   A0A016VT97   A0A3B3HQB6   A0A016V8D6   A0A183GPW8   A0A3P8ETQ0   A0A016UUZ0   A0A016SDV3   A0A183FT77   A0A3P8AAR6   A0A016SKB8   A0A183GGD8   A0A3P8D1Q5   A0A016V9U6   A0A2G9U478   A0A016WBG8   A0A016WAY5   A0A016U5W8   A0A016VCI1   A0A183G762   A0A3P8A609   A0A183F4B8   A0A3P7UF10   A0A016W910   W6NRE4   I7K8L3   A0A016SG79   A0A183GB20   A0A3P8BZ43   A0A016VMH1   A0A016VLP4   A0A016VVS4   A0A016TLV5   A0A016T5F5   A0A3P9IMA9  

KEGG

105842385    no KO assigned | (RefSeq) uncharacterized LOC105842385

GO

GO:0003964   GO:0004519   GO:0016740   GO:0004527  

PANTHER

PTHR23227  

Length:

135

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00444

Exp number, first 60 AAs:

0.00444

Total prob of N-in:

0.29253

outside

1  -  135

 

 

Pi

131.775598

Theta

111.237912

Tajima's D

-0.259133

CLR

0

CSRT

0.302034898255087

Interpretation

Uncertain