Gene

KWMTBOMO11596  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004103

Annotation

heat_shock_protein_1_[Bombyx_mori]

Location

Bomo_Chr19(+):9393648-9400528      View in EpiBrowser

Full name

Protein lethal(2)essential for life      

Alternative Name

Protein Efl21

Location in the cell

Nuclear   Reliability : 2.025

CDS

ATGATGTTTCGCGATTGGTGGGATGACTGGGAGCGTATCGAGCGCCCCTCCAGACTACTGGACCAGCACTTCGGCATGGGTCTGAAGAAGGACGATCTGTTATCCTCCATCAGTTCATTCCCCTCGACCTCGCTCTTCAGAAATTCATACTTCAGACCTTGGAGGGCGAGCTTAGCCAGGCAGGAATCTTCTTCGACGATCAATTTGACGAAAGAGAAATTTGAGGTTATTTTAGACGTTCAGCAATTCACTCCAGACGAGATCACGGTCAAGGCGTCGAACAACACGGTTGTCGTCGAAGGCAAGCACGAGGAGAAACAGGACGAGCACGGCTTCATTTCCCGTCAGTTCACCCGCCGGTACATCCTGCCGACCGGATACGAGGTCAACGACCTGGTCAGCACGTTGTCTTCCGACGGCGTGCTCACCGTCACGGCGCCGAAACGACCTCCACCTAATGCCGGCGAAAGGATCGTACCGATCACGAAAACCGGACCCGCTAAGCAACCTGAGGCTGCGTCTTCGAAGCCGGAACAGCAACAGCCCCGCGAACAAATGGTGCCCATCGTCACCTCCCCTTAA

Protein

MMFRDWWDDWERIERPSRLLDQHFGMGLKKDDLLSSISSFPSTSLFRNSYFRPWRASLARQESSSTINLTKEKFEVILDVQQFTPDEITVKASNNTVVVEGKHEEKQDEHGFISRQFTRRYILPTGYEVNDLVSTLSSDGVLTVTAPKRPPPNAGERIVPITKTGPAKQPEAASSKPEQQQPREQMVPIVTSP

Similarity

Belongs to the small heat shock protein (HSP20) family.

Keywords

Alternative splicing   Complete proteome   Developmental protein   Reference proteome   Stress response  

Feature

chain  Protein lethal(2)essential for life
splice variant  In isoform Short.

Uniprot

Q1HPN2   I3QQD5   A0A2H1V5Z0   A0A0K0XQY2   A0A194QEC2   S4P9T5   + More
Q5MGP0   I4DIM9   A0A2H4LHM1   I4DLZ6   A0A212EW47   A0A194QVP1   A0A2A4JCD0   A0A2D1CRR8   A0A222NUL8   A0A2D3E1M7   L7SUF9   A0A0A7BZ13   R9RZM0   A0A0L7L468   A0A1Y1LDG3   A0A182GBB2   Q16JF4   A0A182G9B8   A0A023EJ81   A0A1S4FYX1   Q16JF5   B0WEQ4   A0A182RCM6   A0A182WJV2   A0A084VQY2   R4V3S5   A0A1Q3FNM5   A0A182MKH7   A0A182Y2P8   A0A182K609   A0A182PDQ3   A0A182QGQ4   A0A182J2X5   A0A182UPN9   A0A182TS89   A0A182KQI8   A0A182WX28   Q7PT53   A0A182I2M0   A0A2M4CM92   A0A182FGD5   A0A182NJW3   A0A1X9PYF6   W8C6T5   A0A0K8W0K1   A0A034WE97   W5J578   T1DF59   N6TQW9   U5EZP2   J3JWZ1   Q16JG5   A0A2J7R3Q2   D6WSJ5   Q16S79   A0A2M4AZA9   A0A0P6K157   A0A0L0C9N7   T1P922   A0A067R3N9   A0A1I8PHQ5   A0A1I8PHK0   V5GXL5   W8GVN7   B4NML7   B4J4G2   B4LMP4   B3MFI6   A0A023EJF1   Q28ZF4   A0A182GSM0   A0A3B0IYA4   Q16JG6   B4KTG1   B4GHU4   A0A0M4ECZ9   A0A336LY47   E0VQ24   A0A1B6EJA3   A0A1B6I6G2   A0A1B6DAM4   D3TRY7   A0A1A9YS51   A0A1B0BZV7   A0A1A9Z568   A0A1A9WQI5   A0A182G9B4   A0A182G9B2   B3NPQ4   B4P9R1   A0A0B4KEY5   B4I8R4   B4QAX2   P82147  

Pubmed

19121390    22957810    26196395    26354079    23622113    16023793    + More
22651552    22118469    28755305    24947609    26227816    28004739    26483478    17510324    24945155    24438588    25244985    20966253    12364791    14747013    17210077    24495485    25348373    20920257    23761445    23537049    22516182    18362917    19820115    26999592    26108605    25315136    24845553    17994087    18057021    15632085    20566863    20353571    17550304    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    22936249    7890160    12537569   

EMBL

BABH01021576    BABH01021577    BABH01021578    DQ443370    ABF51459.1    JQ707906    + More
AFK14100.1    ODYU01000850    SOQ36238.1    KP843905    AKS40084.1    KQ459185    KPJ03295.1    GAIX01005326    JAA87234.1    AY829746    AAV91360.1    AK401147    BAM17769.1    KX845564    ATB54995.1    AK402314    BAM18936.1    AGBW02012080    OWR45715.1    KQ461073    KPJ09603.1    NWSH01001992    PCG69499.1    KX977586    ATN45245.1    KX958483    ASQ43199.1    KY565573    ATU31385.1    JX491640    AGC23336.1    KJ461924    AHW45926.1    KC710023    AGM90556.1    JTDY01003026    KOB70288.1    GEZM01058811    JAV71664.1    JXUM01008989    KQ560273    KXJ83392.1    CH478011    EAT34418.1    JXUM01049178    KQ561594    KXJ78067.1    GAPW01004592    GAPW01004591    JAC09007.1    EAT34417.1    DS231911    EDS45817.1    ATLV01015348    KE525007    KFB40376.1    KC571954    AGM32453.1    GFDL01005911    JAV29134.1    AXCM01000308    AXCN02000526    AAAB01008807    EAA04497.3    EDO64680.1    APCN01000169    GGFL01002269    MBW66447.1    KY378654    ARQ14800.1    GAMC01008347    GAMC01008346    GAMC01008345    JAB98209.1    GDHF01007626    GDHF01005920    GDHF01002965    JAI44688.1    JAI46394.1    JAI49349.1    GAKP01005062    GAKP01005061    JAC53891.1    ADMH02002070    ETN59632.1    GAMD01003236    JAA98354.1    APGK01058443    KB741288    KB632370    ENN70711.1    ERL93710.1    GANO01000421    JAB59450.1    BT127759    AEE62721.1    EAT34407.1    NEVH01007818    PNF35469.1    KQ971354    EFA07114.1    CH477680    EAT37336.1    GGFK01012808    MBW46129.1    GDUN01000060    JAN95859.1    JRES01000729    KNC28920.1    KA644645    AFP59274.1    KK852921    KDR13764.1    GALX01001939    JAB66527.1    KF974799    AHK23446.1    CH964282    EDW85606.1    CH916367    EDW01644.1    CH940648    EDW60031.1    CH902619    EDV36671.1    KPU76347.1    KPU76348.1    GAPW01004482    JAC09116.1    CM000071    EAL25659.2    JXUM01084943    KQ563469    KXJ73788.1    OUUW01000001    SPP72984.1    EAT34406.1    EAT37335.1    CH933808    EDW08522.1    CH479183    EDW36064.1    CP012524    ALC41715.1    UFQT01000040    UFQT01001876    SSX18588.1    SSX32076.1    DS235389    EEB15480.1    GECZ01031761    JAS38008.1    GECU01025221    JAS82485.1    GEDC01014554    JAS22744.1    EZ424189    EZ424190    ADD20465.1    JXJN01023305    JXJN01023306    JXUM01049173    KXJ78063.1    JXUM01049171    KXJ78061.1    CH954179    EDV56845.1    CM000158    EDW92369.1    AE013599    AGB93686.1    CH480824    EDW56989.1    CM000362    CM002911    EDX08409.1    KMY96084.1    AJ250883    X77635    AY047516    BT001462   

Proteomes

UP000005204    UP000053268    UP000007151    UP000053240    UP000218220    UP000037510    + More
UP000069940    UP000249989    UP000008820    UP000002320    UP000075900    UP000075920    UP000030765    UP000075883    UP000076408    UP000075881    UP000075885    UP000075886    UP000075880    UP000075903    UP000075902    UP000075882    UP000076407    UP000007062    UP000075840    UP000069272    UP000075884    UP000000673    UP000019118    UP000030742    UP000235965    UP000007266    UP000037069    UP000095301    UP000027135    UP000095300    UP000007798    UP000001070    UP000008792    UP000007801    UP000001819    UP000268350    UP000009192    UP000008744    UP000092553    UP000009046    UP000092443    UP000092460    UP000092445    UP000091820    UP000008711    UP000002282    UP000000803    UP000001292    UP000000304   

PRIDE

Q1HPN2    P82147   

Pfam

PF00011   HSP20        + More
PF00525   Crystallin

Interpro

IPR008978   HSP20-like_chaperone        + More
IPR003090   Alpha-crystallin_N       
IPR001436   Alpha-crystallin/HSP       
IPR002068   A-crystallin/Hsp20_dom       

SUPFAM

SSF49764   SSF49764       

Gene 3D

2.60.40.790    

ProteinModelPortal

Q1HPN2   I3QQD5   A0A2H1V5Z0   A0A0K0XQY2   A0A194QEC2   S4P9T5   + More
Q5MGP0   I4DIM9   A0A2H4LHM1   I4DLZ6   A0A212EW47   A0A194QVP1   A0A2A4JCD0   A0A2D1CRR8   A0A222NUL8   A0A2D3E1M7   L7SUF9   A0A0A7BZ13   R9RZM0   A0A0L7L468   A0A1Y1LDG3   A0A182GBB2   Q16JF4   A0A182G9B8   A0A023EJ81   A0A1S4FYX1   Q16JF5   B0WEQ4   A0A182RCM6   A0A182WJV2   A0A084VQY2   R4V3S5   A0A1Q3FNM5   A0A182MKH7   A0A182Y2P8   A0A182K609   A0A182PDQ3   A0A182QGQ4   A0A182J2X5   A0A182UPN9   A0A182TS89   A0A182KQI8   A0A182WX28   Q7PT53   A0A182I2M0   A0A2M4CM92   A0A182FGD5   A0A182NJW3   A0A1X9PYF6   W8C6T5   A0A0K8W0K1   A0A034WE97   W5J578   T1DF59   N6TQW9   U5EZP2   J3JWZ1   Q16JG5   A0A2J7R3Q2   D6WSJ5   Q16S79   A0A2M4AZA9   A0A0P6K157   A0A0L0C9N7   T1P922   A0A067R3N9   A0A1I8PHQ5   A0A1I8PHK0   V5GXL5   W8GVN7   B4NML7   B4J4G2   B4LMP4   B3MFI6   A0A023EJF1   Q28ZF4   A0A182GSM0   A0A3B0IYA4   Q16JG6   B4KTG1   B4GHU4   A0A0M4ECZ9   A0A336LY47   E0VQ24   A0A1B6EJA3   A0A1B6I6G2   A0A1B6DAM4   D3TRY7   A0A1A9YS51   A0A1B0BZV7   A0A1A9Z568   A0A1A9WQI5   A0A182G9B4   A0A182G9B2   B3NPQ4   B4P9R1   A0A0B4KEY5   B4I8R4   B4QAX2   P82147  

PDB

3N3E     E-value=6.82218e-21,     Score=244

KEGG

778468    K09542 crystallin, alpha B | (RefSeq) heat shock protein 1

PATHWAY

04141    Protein processing in endoplasmic reticulum - Bombyx mori (domestic silkworm)
04213    Longevity regulating pathway - multiple species - Bombyx mori (domestic silkworm)

GO

GO:0005212   GO:0046872   GO:0045214   GO:0009408   GO:0048471   GO:0042026   GO:0010998   GO:0030018   GO:0051082   GO:0061077   GO:0007275   GO:0008152   GO:0005524   GO:0000723   GO:0003684   GO:0005634   GO:0042162   GO:0043564   GO:0006418   GO:0003824  

Length:

193

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0634500000000001

Exp number, first 60 AAs:

0.06278

Total prob of N-in:

0.13333

outside

1  -  193

 

 

Pi

46.220403

Theta

35.920885

Tajima's D

-0.605816

CLR

161.251515

CSRT

0.217739113044348

Interpretation

Uncertain