Gene
KWMTBOMO11592
Pre Gene Modal
BGIBMGA004101
Annotation
small_heat_shock_protein_[Spodoptera_litura]
Location in the cell
Nuclear Reliability : 3.646
Sequence
CDS
ATGGACCCTCTTAGACGTTGTCCGTTTAGACCATTTTCCGGCCAGTCATTCCCAAATTTATACCAAGATTATCTAATACCTTTTTCACAAAGAAATTCTTACCGGCCATGGTGGAATCAAAGTTGGCAGAATGATTTTGGCTCACGAATTATAGAAGAAAAAGAAAAGTATAAAATATGCCTGGACGTCCAACATTATCAACCGGAAGATATTAGTGTCAAAGTAACAGACAGTGAAATAATCGTAGAAGCAAAACATGAAGAGAGACAAGATAAAACGGGTTTCATTTCCAGACAATTCAAGAGGAGGTATGTACTACCTAAAGATTGTCCGGCGGATAATGTAACTTCAACTTTGTCTTCAGATGGTGTTCTAAGTATTATTGCTCCGAAAATATTTTTAAAAGACACAGGAAAAGTTGTACCAATCAAATTTTGCGGATATAATCATATCGCCTCAAATTTTGATAGCAAAGTAAAAAACAAAACAGAACTTAAAAACATACCAAATGAATCTGATTCTAAAAGTGAACGTAAAGAGTTGGAACGTATTACTGAAAAAATAGAATTGAAACCTACAAGTGAAGCTAAAGAATGGGAATTTAAGAATGTTAATACGGAAACAGAATATAAAACTAATGTAGAAATTAATGATCCTAAATTTTTCCGAGATTTACAACCTAGAAGTGAATTTGGTGTGACACAAAAAGATATCGATGAAGCAATTAAAGAAGCTAATGAACTTATAAATCGCAACAAGGCAGAAATCTCCGAACATAGTCGTTTGATAGCGTCACAATTTGAAGGTGATTCCCTAGATTCCAAAAAATTATATTCAAATGTCGATGCTGTATCGTATAACGCTAATGAATTGACAGAAAAGAAAGGTTCTGAAATGTTAAAATTGACAGAACAATTTTCTCAGACCTCTCTGCATGCGTCGTCGAATGTTGAAAATGTGTTTTCCATGAAAAATACAACAGAATCTATGAGTCAACAATCCTCCTTATTAAACAAATCTTATTCAGAAACTATTGGTACAGGAACTGAAATGACTTCTACTAAAGACATTAGCGCCGAACTCGACGAGGCCGCCGAAAATGTGTGA
Protein
MDPLRRCPFRPFSGQSFPNLYQDYLIPFSQRNSYRPWWNQSWQNDFGSRIIEEKEKYKICLDVQHYQPEDISVKVTDSEIIVEAKHEERQDKTGFISRQFKRRYVLPKDCPADNVTSTLSSDGVLSIIAPKIFLKDTGKVVPIKFCGYNHIASNFDSKVKNKTELKNIPNESDSKSERKELERITEKIELKPTSEAKEWEFKNVNTETEYKTNVEINDPKFFRDLQPRSEFGVTQKDIDEAIKEANELINRNKAEISEHSRLIASQFEGDSLDSKKLYSNVDAVSYNANELTEKKGSEMLKLTEQFSQTSLHASSNVENVFSMKNTTESMSQQSSLLNKSYSETIGTGTEMTSTKDISAELDEAAENV
Summary
Similarity
Belongs to the small heat shock protein (HSP20) family.
Uniprot
Pubmed
Proteomes
PRIDE
Pfam
PF00011 HSP20
Interpro
SUPFAM
SSF49764
SSF49764
Gene 3D
ProteinModelPortal
PDB
3J07
E-value=2.51689e-19,
Score=234
Ontologies
GO
Topology
Length:
368
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00024
Exp number, first 60 AAs:
0
Total prob of N-in:
0.01018
outside
1 - 368
Population Genetic Test Statistics
Pi
147.887362
Theta
157.877361
Tajima's D
-0.198966
CLR
84.059709
CSRT
0.32178391080446
Interpretation
Uncertain
