Silkworm Genome Informatics Database

Gene

KWMTBOMO11587

Pre Gene Modal

BGIBMGA004098

Annotation

PREDICTED:_bromodomain-containing_protein_DDB_G0270170-like_isoform_X2_[Papilio_machaon]

Location

Bomo_Chr19(+):9320148-9325376 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.747

CDS

ATGTCGGGAAAACCATATTCTATGAGAGAGATGAAAACAATTGTCGAGTACTTGACAGAACATAAAGTCTACTCAGAAATCAGAGGTAGAAAAATGTGGATGGATTTTGCAAATTCTAATATAACAACCAGGACCTGGCAGAGTTTGAAAGAAACATTTTTGAAACGCATACTACCAGATATACACAACCCTTATTATAAGCTGACAAGGGAAGAAGTAATCAGTTTCAGACAAGGGTGTGATATTGTGGCAAAAGATAAAATGAATAAACTGGAAATTAAAACAAATAGTGATGGTTCTGGCAGTAATGCTGAAACATGCAACAAAGAAAAGACAACTAATAATGAGACAATCAAAGAATCAAAGACAAGTCGAAATGATGAAGAGGAGATACTGAATAGTTCAGTTGATGGCAAAGATTCTACTCTTAAAAAGTCAAACATAGCTTCAAATGAAAATAATGTAACAAGTAACTACTATGAAACAGCTGAAGATATACAAAAAATATTAGAATCTCCAAAGCCTGATGATCAAGAAAATGCAACCATGTTACCAGATGATACTCTCAGAGACAAAACTTACACACAAACTCTTGCACCAACCTTACAAGATGTGTTAAATGATTTTGTAACAGAATCTGATGACTCCGATAAGGAACCGAAAATGGAAATAGTTGAAGATTCAAATAAAAGTATTGATGATGGAAATGAATCAAAATTTCCGCAAGATGACGATAGCTCTAATATGGCTATCACCGATATTGCGAAGAATGCTAAGGGGCTGTCTGCTGAATTTGTTGAAGAAGTATTGTTGAGTGAGATTCAAGACTCTGGGATACAAGCATTAAAATCGAAATCAATTAATTTAAAGAAAACACAGAAAGCTAACATTGAAAATAAAAGTAACACAAAAACACAGGACACAATTGTGATTGATTCTGAAAAAGAAAAAGAGACTATTAATGCTGAAAGTAAAAACGATACAATAGAAGTAGAAGAACATCAAGATATTAACTCTAATAAAGATAAAACAAATAATATCAAAGCACCTGAAAAGGAAAAGGTTTTGGATCAGCATCACAATAAACAGTCGCAAAATAGTTCTGGGGACACTTTGATTCCCAATAATCAAGAGTGTTTGAGCAAGAATAGTTTGAGTAATCAAAATGAAAAATCTCCTGAACACAGAGAAGAAGAAGAACATATATTAAATGTTTCAAGAAAAAGAACTAGTTCAGAAGAAACTTTAGTTTTAGAACAGAAGAAGAGAAAGAATGAGAATTCAACAAAGTTTGATGAAATACTTCAGGATGTAGCAACACACAACAAAAATGAACAAAATGGCTTAGATAAAGATAGAGCAAAAATCAATGAAATCAAAAAGAAAGAAAATGTTATTGCAAATAAATCAAAACCAAGTAATAACAAAGCAAAACCTGCATATGAAAACCCATGTTTAAAGAGTGTTAACTTATTTGCTGATCAATTCAATAATTTAGAATCAGATGATTCAGAAACAAGCGGAGCTATTAACAATACAATAAACAAAGTTGGATCTAATGATGAATTCGAAAACATACAGACAGCCATTTTAAAAAAAGACGTAATTGTTTTACAATCTCATTCAGAAACTGAGAGTCACACCGAAAAAACTCCGAAAAAGGACAGAAAAATCGGCAGATTGCAAAGGAAAAAGGCCTTGGCTAATGTTTTTGGATTTTCCAGTGGAACAGTAACATCAAGCAGAAAGACAAAATTAAGTTTAAAAAAGTCGAGTCCACACCAAAAATAG

Protein

MSGKPYSMREMKTIVEYLTEHKVYSEIRGRKMWMDFANSNITTRTWQSLKETFLKRILPDIHNPYYKLTREEVISFRQGCDIVAKDKMNKLEIKTNSDGSGSNAETCNKEKTTNNETIKESKTSRNDEEEILNSSVDGKDSTLKKSNIASNENNVTSNYYETAEDIQKILESPKPDDQENATMLPDDTLRDKTYTQTLAPTLQDVLNDFVTESDDSDKEPKMEIVEDSNKSIDDGNESKFPQDDDSSNMAITDIAKNAKGLSAEFVEEVLLSEIQDSGIQALKSKSINLKKTQKANIENKSNTKTQDTIVIDSEKEKETINAESKNDTIEVEEHQDINSNKDKTNNIKAPEKEKVLDQHHNKQSQNSSGDTLIPNNQECLSKNSLSNQNEKSPEHREEEEHILNVSRKRTSSEETLVLEQKKRKNENSTKFDEILQDVATHNKNEQNGLDKDRAKINEIKKKENVIANKSKPSNNKAKPAYENPCLKSVNLFADQFNNLESDDSETSGAINNTINKVGSNDEFENIQTAILKKDVIVLQSHSETESHTEKTPKKDRKIGRLQRKKALANVFGFSSGTVTSSRKTKLSLKKSSPHQK

Uniprot

H9J3L1 A0A2H1V5X6 A0A2A4JDK8 A0A194QEC7

Pubmed

19121390 26354079

EMBL

BABH01021568 BABH01021569 ODYU01000850 SOQ36231.1 NWSH01001992 PCG69492.1 + More
KQ459185 KPJ03300.1

Proteomes

UP000005204 UP000218220 UP000053268

PRIDE

H9J3L1

Pfam

PF08914 Myb_DNA-bind_2

Interpro

IPR015010 Rap1_Myb_dom + More
IPR009057 Homeobox-like_sf

SUPFAM

SSF46689 SSF46689

ProteinModelPortal

H9J3L1 A0A2H1V5X6 A0A2A4JDK8 A0A194QEC7

KEGG

NA

GO

GO:0003677 GO:0007165 GO:0003924 GO:0007186 GO:0019001 GO:0031683 GO:0005525 GO:0007188 GO:0006418 GO:0003824

Length:

596

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00283

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00095

outside

1 - 596

Pi

258.121663

Theta

195.621267

Tajima's D

-1.816044

CLR

0

CSRT

0.0246987650617469

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics