SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11584  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004022
Annotation
Guanine_nucleotide-binding_protein_G(o)_subunit_alpha_47A_[Papilio_xuthus]
Full name
G protein alpha o subunit       + More
Guanine nucleotide-binding protein G(o) subunit alpha      
Alternative Name
Guanine nucleotide-binding protein G(o) subunit alpha 47A
Location in the cell
Nuclear   Reliability : 1.947
 

Sequence

CDS
ATGCTCACGGTCTCCTTTGATTCTAGTTTCCTGGACGACCTCGACCGGTTAGGAGCAAAGGATTACCAGCCCACCGAACAAGATATCCTAAGGACTAGAGTCAAAACGACTGGAATCGTCGAAGTACATTTCTCCTTCAAAAACCTCAATTTCAAATTGTTCGACGTGGGCGGGCAGCGATCGGAGAGGAAGAAATGGATTCATTGCTTCGAGGACGTGACCGCGATCATATTCTGTGTTGCCATGTCTGAATATGATCAGGTGTTGCACGAGGATGAAACAACGAACCGTATGCAGGAGAGTCTAAAGTTGTTCGATTCTATCTGCAACAACAAATGGTTCACCGACACCAGCATCATCTTGTTCCTGAACAAGAAGGATCTCTTCGAGGAAAAAATTCGCAGATCGCCGCTCACCATATGCTTTCCAGAATATACAGGCGCGCAAGAGTACGGCGAGGCGGCCGCGTACATCCAGGCGCAGTTCGAAGCGAAGAACAAGTCCACCACGAAGGAGATCTACTGCCACATGACGTGCGCCACCGACACGAACAACATCCAGTTTGTGTTCGACGCGGTGACCGACGTGATCATCGCCAACAACCTGCGCGGCTGCGGCCTGTACTAG
Protein
MLTVSFDSSFLDDLDRLGAKDYQPTEQDILRTRVKTTGIVEVHFSFKNLNFKLFDVGGQRSERKKWIHCFEDVTAIIFCVAMSEYDQVLHEDETTNRMQESLKLFDSICNNKWFTDTSIILFLNKKDLFEEKIRRSPLTICFPEYTGAQEYGEAAAYIQAQFEAKNKSTTKEIYCHMTCATDTNNIQFVFDAVTDVIIANNLRGCGLY

Summary

Description
Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. Plays a role in glial cell differentiation during embryogenesis; loco, Galphai and the G-protein coupled receptor, moody, are required in the surface glia to achieve effective insulation of the nerve cord.
Subunit
G proteins are composed of 3 units; alpha, beta and gamma. The alpha chain contains the guanine nucleotide binding site.
Similarity
Belongs to the G-alpha family. G(i/o/t/z) subfamily.
Keywords
Alternative splicing   Complete proteome   GTP-binding   Lipoprotein   Magnesium   Metal-binding   Myristate   Nucleotide-binding   Palmitate   Reference proteome   Transducer  
Feature
chain  G protein alpha o subunit
splice variant  In isoform B.
EMBL
BABH01021563    BABH01021564    GU266213    ADB25316.1    AB167957    BAD74000.1    + More
KQ459185    KPJ03305.1    ODYU01007387    SOQ50102.1    KQ461073    KPJ09614.1    GU266214    ADB25317.1    UFQT01000004    SSX17267.1    NWSH01001566    PCG70839.1    AGBW02012080    OWR45706.1    GDQN01009250    JAT81804.1    AXCM01003669    GFDF01007019    JAV07065.1    CH916367    EDW01112.1    CM000071    EAL26334.1    CH479183    EDW35479.1    M86660    M29602    M31203    M29601    M31198    M31199    M31200    M31201    M31202    M30151    M30152    M31129    M29731    M29732    AE013599    AY121631    BT001768    BT046134    CM000362    CM002911    EDX06499.1    KMY92789.1    CH954177    EDV58106.1    KQS70246.1    CM000157    EDW89661.1    KRJ98648.1    KRJ98647.1    KQS70247.1    KMY92790.1    KMY92792.1    CH902619    EDV38049.1    CH964154    EDW79850.1    OUUW01000001    SPP74108.1    KRT03006.1    CH940648    KRF80196.1    CH933808    KRG04325.1    CP012524    ALC40606.1    GEBQ01023498    JAT16479.1    GECZ01028525    GECZ01006856    JAS41244.1    JAS62913.1    SPP74109.1    CH480816    EDW47264.1    KRF99171.1    KPU77232.1    KPU77233.1    AXCN02000516    ADMH02002165    ETN58107.1    EDW08869.1    EDW61737.1    KRF80195.1    KRF80197.1    EZ423916    ADD20192.1    JXJN01024932    JXJN01024933    JXJN01024934    JXJN01024935    JXJN01024936    ATLV01024045    ATLV01024046    KE525348    KFB50440.1    GL732602    EFX72162.1    CCAG010008069    GBBI01000170    JAC18542.1    DS231813    EDS25690.1    KM610204    GBHO01035721    GDHC01014612    AJQ81035.1    JAG07883.1    JAQ04017.1    AAAB01008960    EAA11901.3    GGFL01001483    MBW65661.1    GGFK01007401    MBW40722.1    GGFJ01006827    MBW55968.1    SSX17266.1    GGFK01007015    MBW40336.1    GFDL01000334    JAV34711.1    NEVH01017452    PNF24294.1    CH477523    EAT39565.1    APCN01001491    GGFJ01006826    MBW55967.1    GEHC01000747    JAV46898.1    GGFL01001485    MBW65663.1    EAU76497.2    GEDC01003807    GEDC01001973    JAS33491.1    JAS35325.1    CVRI01000067    CRL06717.1    GFDL01003857    JAV31188.1    AY603976    AAT34978.1    ABLF02021378    ABLF02021382    ABLF02021383    ABLF02021386    ABLF02021387    KK852779    KDR16702.1    GGMS01004936    MBY74139.1    ACPB03023209    ACPB03023210    ACPB03023211    GL449694    EFN82214.1    DS235430    EEB15665.1    GGFL01005252    MBW69430.1    GU564592    ADK94869.1    GAMC01007499    JAB99056.1    GAMC01007498    GAMC01007497    JAB99057.1    LRGB01000024    KZS21762.1    GFDL01003861    JAV31184.1    LN830713    CFW94222.1   
Pfam
PF00503   G-alpha
Interpro
IPR001408   Gprotein_alpha_I        + More
IPR001019   Gprotein_alpha_su       
IPR027417   P-loop_NTPase       
IPR011025   GproteinA_insert       
SUPFAM
SSF47895   SSF47895        + More
SSF52540   SSF52540       
Gene 3D
PDB
6OIK     E-value=6.11281e-98,     Score=909

Ontologies

Topology

Length:
208
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.0058
Exp number, first 60 AAs:
0.00032
Total prob of N-in:
0.01816
outside
1  -  208
 
 

Population Genetic Test Statistics

Pi
212.867573
Theta
166.243966
Tajima's D
0.86364
CLR
0.144636
CSRT
0.625018749062547
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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