SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11578
Pre Gene Modal
BGIBMGA004025
Annotation
hypothetical_protein_KGM_09969_[Danaus_plexippus]
Location in the cell
Nuclear   Reliability : 2.731
 

Sequence

CDS
ATGTATCGTAATGCATACCAACGAGGGATGCTGACCATATTTTTTAGCGTCGGTTCTAAGCCTTTGGAAATATGGGACACACATACTCAAGACGGTTATATTACACGGTTTTTAGATCAAGACATAAAGTCTATGGTATTAGAAATACTCGGAACTAATGTAAGTACAACGTACATGACGTGCCCTAAAGGAAAAACTGTTTTAGGAATAACTATGCCTTTTCTAGTCATGATAGTCAAGAACTTGAAAAAGTACTTTAGTTTTGAAGTTACCATCCTTGATGAGACTGGAACACGAAGACGATTTCGTGTTTCAAACTTCCAAAGTACTACGCAGATTTTACCACTGTGCACCGTTATGCCAATAGGACTATCAGAAGGCTGGAATCAAATACAATTTAATTTAGCAGAATTCACCAGACGAGCTTACAACAAGCAATTTGTGGAAGTGCAAAAACTCAAAATTAATGCAAATATTCGGCTCAGGAGGATTTACTTTACTGAACGACTCGTACCAGAGGATCAATTACCACCAGAATATAAGTTGTATTTTCCTTTAGCAAAATCAGCTAAAGCAAAGAAAGGATCAGTAGAGCATGTTAAGGAAAACGTTAAACCATCTACATCCTTGCAAATTGCTGTAGAAACACCAATTGAAGAGAAGAAGGGTAGCAAAGTTGACATAACCAAACAAGGTTCTAAGGCTTCATTACGTTCTCTCAGGAAATCTACGTCGCATGAGGTGAGAATATCACAAGAAAAGATTCAGGAGGTTCCTGAAGAAAATGTATCTGTTTCAAAACACTCTTCAGAACGAACTGAGTCGCAAACGGTAGTTAAAAGTGGAACAGATGTATTTGATAAGCACGAAGCCAGTATAACAGGGAATGAAAATATAAATAATGAAAAATCAAGTGATAATGTGGAAATTACGGAAATCATGCCAAAAAAGTCAGAAGAATCGAATCAGGAACGTGTTGAGGTAACAGAGGAAACACAGGCTACTGAGGAAACGCAAGTAACCGAGGAAATACAAGTAGCTGAGGAAACACAAGTAACTGAGGAAATACAAGTAGCTGAGGAAACACAAGTAACTGAGGAAACACAGGTTGCCGATGCAGCCACAGATAGTACTGCTCCACCAGATGTTGTTCAATAG
Protein
MYRNAYQRGMLTIFFSVGSKPLEIWDTHTQDGYITRFLDQDIKSMVLEILGTNVSTTYMTCPKGKTVLGITMPFLVMIVKNLKKYFSFEVTILDETGTRRRFRVSNFQSTTQILPLCTVMPIGLSEGWNQIQFNLAEFTRRAYNKQFVEVQKLKINANIRLRRIYFTERLVPEDQLPPEYKLYFPLAKSAKAKKGSVEHVKENVKPSTSLQIAVETPIEEKKGSKVDITKQGSKASLRSLRKSTSHEVRISQEKIQEVPEENVSVSKHSSERTESQTVVKSGTDVFDKHEASITGNENINNEKSSDNVEITEIMPKKSEESNQERVEVTEETQATEETQVTEEIQVAEETQVTEEIQVAEETQVTEETQVADAATDSTAPPDVVQ

Summary

Pfam
PF05018   DUF667
Interpro
IPR040441   CFA20/C3orf67        + More
IPR007714   CFA20_dom       

Ontologies

GO

Topology

Length:
385
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
1.41111
Exp number, first 60 AAs:
0.11157
Total prob of N-in:
0.12172
outside
1  -  385
 
 

Population Genetic Test Statistics

Pi
195.423013
Theta
148.949224
Tajima's D
0.743281
CLR
0
CSRT
0.579871006449677
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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