Gene

KWMTBOMO11571  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004029

Annotation

PREDICTED:_pleckstrin_homology_domain-containing_family_F_member_2_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr19(-):8694281-8704297      View in EpiBrowser

Full name

alpha-1,2-Mannosidase      

Location in the cell

Nuclear   Reliability : 4.559

CDS

ATGGTGGATCGTTTAGTGAATAGTGAAGCAAATGCAAGAAGAATTGCAATGGTGGAGAGCTGCTTCGGCAGCTCGGGACAACCTCTAGCAGAGCAAGGGCGGGTCCTTGTTGGTGAAGGTGTCTTGACAAAAATTTGCAGGAAAAAACCAAAGGCACGACAATTCTTTTTGTTTAATGACATTTTGGTGTATGGCAATATAGTTATTAACAAGAAAAAATACAACAAGCAACATATCATTCCATTAGAGGAGGTTAAGCTGGAGTCACTGAAAGATGAAGGACAATACCGTAATGGATGGTTAATCCGTACTGCATCCAAATCATTTGCTGTGTATGCTGCTACAGCCACAGAAAAAGAAGAATGGATGGCTCATATTGAAAAATGTATAGAAGATTTATTAAGAAAAAGTGGCAAGCAACCTCCTTCAGAGCATGCAGCTGTTTGGGTACCAGACAATGAAGCCTCAATATGTATGCACTGTAAGAAAACACAGTTCACTGTGATAAACAGAAGGCATCATTGCCGCAAGTGCGGATCCGTGGTGTGTGGTCCGTGCTCGTCGAAGCGGTACATCCTGCGCGGCCAGAGCGACAAGCCGCTGCGCGTGTGCCTGCAGTGCTACGACGAGCTCAGCAGGGAACGCGTCCGACCCCCCAACCAGCAGCAGACCTCGGCCAACACCACGCCCGTTAAAACCGATACGGCCGGTTCCGGAGGGGACTCCTCGGGCGACGAAGACAGTGATGACGATGATATCAATGCTGAAGAGAAACACGACGAGCCAAAGTTCTACGGTGACAGCGAAAAGACTGAAGAGACCAACAATCATTCGTCCAAGGAAGCCGCCAAGTAA

Protein

MVDRLVNSEANARRIAMVESCFGSSGQPLAEQGRVLVGEGVLTKICRKKPKARQFFLFNDILVYGNIVINKKKYNKQHIIPLEEVKLESLKDEGQYRNGWLIRTASKSFAVYAATATEKEEWMAHIEKCIEDLLRKSGKQPPSEHAAVWVPDNEASICMHCKKTQFTVINRRHHCRKCGSVVCGPCSSKRYILRGQSDKPLRVCLQCYDELSRERVRPPNQQQTSANTTPVKTDTAGSGGDSSGDEDSDDDDINAEEKHDEPKFYGDSEKTEETNNHSSKEAAK

Similarity

Belongs to the glycosyl hydrolase 47 family.

Uniprot

H9J3E2   A0A194QXE2   A0A1E1WDT1   A0A194QCX5   A0A2A4K718   A0A1E1WSK9   + More
A0A2H1WFT7   A0A1E1W5T9   A0A212EX47   A0A1E1VZ17   A0A2J7PU68   A0A224XHG3   A0A023FCR3   A0A069DYD1   A0A1B6LVC2   A0A0V0G813   A0A2J7PU46   A0A0P4VYR5   A0A1B6FNB4   V5GU88   A0A182K8U3   A0A1B6KFC3   A0A1B6CMS0   A0A182J0U6   A0A1Y1LIE2   A0A182VPT7   A0A1B0GJR8   A0A1L8DD50   A0A0A9YB11   A0A2S2QZZ7   A0A158P3Y2   A0A1L8DDK1   A0A182QNU3   A0A1S4H3N6   A6YPS6   A0A232ERB1   J9K8V3   A0A2H8TZR7   A0A023EMW5   A0A139WEK4   A0A182RPK6   A0A088AJ29   A0A1Q3FWR7   K7IS81   A0A2M4BWR9   A0A182NNN0   A0A2M3ZGZ3   A0A2M4AE19   A0A0P4VSQ0   A0A182MFP6   A0A1S4G271   A0A0C9QXW2   W8B9X0   A0A034VVZ8   A0A1Q3FWX8   E9J1Q0   A0A0A1WVB7   A0A2M4AEC7   Q1DH65   A0A1B0A0A5   A0A1Q3F6P7   A0A1B0FAI8   A0A182SZS3   A0A0K8U8R9   A0A1A9ULM8   N6TT54   A0A087TG54   B0X7A7   A0A182YN34   U5EVQ9   Q7PPP7   E9GYI5   T1P9E8   A0A2P6LJA7   A0A182GBU6   A0A0P5G799   A0A0P6HBP9   A0A0P5VVM6   A0A3L8D8F1   A0A3R7ND93   B3MRW7   A0A0K8TQV4   A0A1W4VF51   A0A1I8PEK4   B4MB31   A0A0L0C8R5   W5JV44   A0A151J8Y0   A0A151X0I7   A0A1L8DCG1   A0A151JVD9   A0A195CPY2   A0A293N3D0   V5HGE8   A0A131XC38   A0A0M5J0S0   A0A131YJT5   L7MCU4   A0A224Z686   L7MBL7  

EC Number

3.2.1.-

Pubmed

19121390    26354079    22118469    25474469    26334808    27129103    + More
28004739    25401762    26823975    21347285    12364791    18207082    28648823    24945155    18362917    19820115    20075255    17510324    24495485    25348373    21282665    25830018    23537049    25244985    21292972    25315136    26483478    30249741    17994087    18057021    26369729    26108605    20920257    23761445    25765539    28049606    26830274    25576852    28797301   

EMBL

BABH01021510    BABH01021511    KQ461073    KPJ09625.1    GDQN01005939    JAT85115.1    + More
KQ459185    KPJ03317.1    NWSH01000111    PCG79450.1    GDQN01001100    JAT89954.1    ODYU01008049    SOQ51324.1    GDQN01008730    JAT82324.1    AGBW02011827    OWR46072.1    GDQN01011071    JAT79983.1    NEVH01021208    PNF19864.1    GFTR01004489    JAW11937.1    GBBI01000089    JAC18623.1    GBGD01002470    JAC86419.1    GEBQ01012354    JAT27623.1    GECL01001966    JAP04158.1    PNF19865.1    GDKW01000837    JAI55758.1    GECZ01018072    JAS51697.1    GALX01003239    JAB65227.1    GEBQ01030093    JAT09884.1    GEDC01022529    JAS14769.1    GEZM01054776    JAV73403.1    AJWK01022156    AJWK01022157    AJWK01022158    AJWK01022159    AJWK01022160    GFDF01009691    JAV04393.1    GBHO01014240    GBRD01012558    GBRD01012556    GBRD01012555    GBRD01012551    GBRD01003291    GDHC01020392    JAG29364.1    JAG53266.1    JAP98236.1    GGMS01014128    MBY83331.1    ADTU01008610    GFDF01009690    JAV04394.1    AXCN02001878    AAAB01008943    EF639087    ABR27972.1    NNAY01002629    OXU20903.1    ABLF02034425    GFXV01007988    MBW19793.1    GAPW01003398    JAC10200.1    KQ971354    KYB26366.1    GFDL01002995    JAV32050.1    GGFJ01008376    MBW57517.1    GGFM01007053    MBW27804.1    GGFK01005710    MBW39031.1    GDRN01100469    JAI58567.1    AXCM01002503    GBYB01005527    GBYB01005528    JAG75294.1    JAG75295.1    GAMC01012715    GAMC01012713    GAMC01012712    GAMC01012711    JAB93843.1    GAKP01012692    GAKP01012691    GAKP01012690    JAC46262.1    GFDL01002997    JAV32048.1    GL767674    EFZ13287.1    GBXI01011273    GBXI01008704    GBXI01001116    GBXI01000665    JAD03019.1    JAD05588.1    JAD13176.1    JAD13627.1    GGFK01005820    MBW39141.1    CH899796    EAT32501.1    GFDL01011804    JAV23241.1    CCAG010006942    GDHF01033345    GDHF01029458    GDHF01029343    GDHF01025347    GDHF01021440    GDHF01001777    JAI18969.1    JAI22856.1    JAI22971.1    JAI26967.1    JAI30874.1    JAI50537.1    APGK01019947    KB740150    KB632173    ENN81243.1    ERL89568.1    KK115064    KFM64093.1    DS232445    EDS41860.1    GANO01001766    JAB58105.1    EAA10045.5    GL732575    EFX75476.1    KA644785    AFP59414.1    MWRG01000020    PRD38671.1    JXUM01053341    JXUM01053342    JXUM01053343    KQ561772    KXJ77589.1    GDIQ01246262    JAK05463.1    GDIP01237000    GDIQ01022487    LRGB01002864    JAI86401.1    JAN72250.1    KZS05772.1    GDIP01094562    JAM09153.1    QOIP01000011    RLU16392.1    QCYY01000597    ROT84067.1    CH902622    EDV34522.1    KPU75184.1    GDAI01001075    JAI16528.1    CH940655    EDW66440.1    JRES01000755    KNC28666.1    ADMH02000041    ETN68016.1    KQ979480    KYN21279.1    KQ982612    KYQ53866.1    GFDF01009942    JAV04142.1    KQ981701    KYN37493.1    KQ977513    KYN02169.1    GFWV01022559    MAA47286.1    GANP01007859    JAB76609.1    GEFH01004394    JAP64187.1    CP012528    ALC48298.1    GEDV01010386    JAP78171.1    GACK01003402    JAA61632.1    GFPF01010644    MAA21790.1    GACK01003403    JAA61631.1   

Proteomes

UP000005204    UP000053240    UP000053268    UP000218220    UP000007151    UP000235965    + More
UP000075881    UP000075880    UP000075920    UP000092461    UP000005205    UP000075886    UP000215335    UP000007819    UP000007266    UP000075900    UP000005203    UP000002358    UP000075884    UP000075883    UP000008820    UP000092445    UP000092444    UP000075901    UP000078200    UP000019118    UP000030742    UP000054359    UP000002320    UP000076408    UP000007062    UP000000305    UP000095301    UP000069940    UP000249989    UP000076858    UP000279307    UP000283509    UP000007801    UP000192221    UP000095300    UP000008792    UP000037069    UP000000673    UP000078492    UP000075809    UP000078541    UP000078542    UP000092553   

PRIDE

H9J3E2   

Pfam

PF01363   FYVE        + More
PF00169   PH
PF01532   Glyco_hydro_47

Interpro

IPR000306   Znf_FYVE        + More
IPR001849   PH_domain       
IPR011993   PH-like_dom_sf       
IPR037871   PH_Phafin       
IPR017455   Znf_FYVE-rel       
IPR013083   Znf_RING/FYVE/PHD       
IPR011011   Znf_FYVE_PHD       
IPR001382   Glyco_hydro_47       
IPR036026   Seven-hairpin_glycosidases       
IPR012341   6hp_glycosidase-like_sf       

SUPFAM

SSF57903   SSF57903        + More
SSF48225   SSF48225       

Gene 3D

2.30.29.30     3.30.40.10     1.50.10.10    

CDD

cd01218  PH_Phafin2-like

ProteinModelPortal

H9J3E2   A0A194QXE2   A0A1E1WDT1   A0A194QCX5   A0A2A4K718   A0A1E1WSK9   + More
A0A2H1WFT7   A0A1E1W5T9   A0A212EX47   A0A1E1VZ17   A0A2J7PU68   A0A224XHG3   A0A023FCR3   A0A069DYD1   A0A1B6LVC2   A0A0V0G813   A0A2J7PU46   A0A0P4VYR5   A0A1B6FNB4   V5GU88   A0A182K8U3   A0A1B6KFC3   A0A1B6CMS0   A0A182J0U6   A0A1Y1LIE2   A0A182VPT7   A0A1B0GJR8   A0A1L8DD50   A0A0A9YB11   A0A2S2QZZ7   A0A158P3Y2   A0A1L8DDK1   A0A182QNU3   A0A1S4H3N6   A6YPS6   A0A232ERB1   J9K8V3   A0A2H8TZR7   A0A023EMW5   A0A139WEK4   A0A182RPK6   A0A088AJ29   A0A1Q3FWR7   K7IS81   A0A2M4BWR9   A0A182NNN0   A0A2M3ZGZ3   A0A2M4AE19   A0A0P4VSQ0   A0A182MFP6   A0A1S4G271   A0A0C9QXW2   W8B9X0   A0A034VVZ8   A0A1Q3FWX8   E9J1Q0   A0A0A1WVB7   A0A2M4AEC7   Q1DH65   A0A1B0A0A5   A0A1Q3F6P7   A0A1B0FAI8   A0A182SZS3   A0A0K8U8R9   A0A1A9ULM8   N6TT54   A0A087TG54   B0X7A7   A0A182YN34   U5EVQ9   Q7PPP7   E9GYI5   T1P9E8   A0A2P6LJA7   A0A182GBU6   A0A0P5G799   A0A0P6HBP9   A0A0P5VVM6   A0A3L8D8F1   A0A3R7ND93   B3MRW7   A0A0K8TQV4   A0A1W4VF51   A0A1I8PEK4   B4MB31   A0A0L0C8R5   W5JV44   A0A151J8Y0   A0A151X0I7   A0A1L8DCG1   A0A151JVD9   A0A195CPY2   A0A293N3D0   V5HGE8   A0A131XC38   A0A0M5J0S0   A0A131YJT5   L7MCU4   A0A224Z686   L7MBL7  

PDB

3MPX     E-value=1.4941e-15,     Score=200

KEGG

101746459    no KO assigned | (RefSeq) pleckstrin homology domain-containing family F member 2

GO

GO:0046872   GO:0005769   GO:0035091   GO:0016021   GO:0007032   GO:0006897   GO:0005770   GO:0008333   GO:0016020   GO:0005509   GO:0008152   GO:0004571   GO:0016887   GO:0004713   GO:0005524   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

Length:

284

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.35356

Exp number, first 60 AAs:

0.15685

Total prob of N-in:

0.05225

outside

1  -  284

 

 

Pi

218.012189

Theta

165.71052

Tajima's D

0.537857

CLR

0.033302

CSRT

0.52262386880656

Interpretation

Uncertain