Gene

KWMTBOMO11569

Pre Gene Modal

BGIBMGA004031

Annotation

PREDICTED:_uncharacterized_protein_C1orf112_homolog_[Bombyx_mori]

Location

Bomo_Chr19(-):8630109-8642067      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 2.605

CDS

ATGAATAATTCTCAAAGCTCTGATTTCTTTGACGAAAGTGGTGATATATCGTGCGCTAGCCCGAAGTTGATATCGGATGAAGTTCATGATGGTTTATCTCATGACGACTTAATATCCAAAACAAAATTTGCTCTGAGCGGTGGCTTCCGAAAAGAATTGAAGAAACCTACTTTTTATAATTATATTTTATCACTGTTAGATGATTGTGGAAAATGCATTTCTCAAAGCCTCGATCTTATAATTAGTACTTTATCAGAAACAACTATATCAGTTGACGTACTTGTTGAACATTTGATGGATGCTGTCTCCATACTACAAATGCTATCAGAATGCATTAAAACAGTTATTGAGGTAGCAGTAATGTCATGTTGCAGAATACAAAATTTTCCAACGGCCACTAGCCGCATTCTGATGATTGTATTTATGCATTGTAGGGACAGTGAAGAATTATATGGGAATGTGCTTAAAAATGTTGAAAATCAACTGAAAGATTTATTCCGTGCCTGTCATGAACTGCAGTTAACATATTTAATGGTGATTGAAAAAAATTTTGCATTTGACCTTACTGAGAGAGAGCACTTGCTTATTCTTTTTGATGCTTTAGAAATAAATTTGAAGATTGGAGAGTTGGTCCAGACATTAGACATTAAGACAATGGCTGAACAATGGAAAGGATTGATAGCAGTATATGAAAAATACTCAACGGCTTTAATTGATACGAATATTTTTAACGATTGTACTGCAGTTCTATGTGGTATGATAGAAAACAATTTGAAAACAGCTCTGCAGGCAAATCAAGATGAAAAATCAATTCTAAGATCGCTCAAAGTAACCGGTTTCACTCTAAAGATCTTAGTTAAGATATGCATAATTTTTAGGCTTGCTTCAGTTAAAAAACATCAACATTTAGTCGATCTACTTATTTTTATAATTATGAACTGTAATACAAGCAGTGAGAATTCTGAAAGAGACAACAACACAATAAATACTTATGTATTGAATCCATCAGAGACTCTTTTAAATGAACTTATGCTGGATGAAAATTTTAACAATACCATTCTCAACTGCAATATAGAAAATTTACTCCGAGAACGCAAACTATCGGGCTTCGTGTCACTACTGATGTATCTAATGAAAACGATAGTACATAAAAAAAACACGAAAATCTCGAAGAAGAGAATCATCGAATGCGTATATGGTTTTCTTCCTTACTGTCAAACAATCCTAAAGCACAGTCGGAGCACGTACGAAGACTTGTTGGTGAAAATGGCAGCTTTAATAATGATTATGGATAATGAAGAATTCGAATTTTTAGAGAGACGTATGCTTGAAGCAATACTCGGTACAGAATGTTTTAGTGCATTGTTTTCGTCCAACCTCTGGAGTTTAATGGGAAGAATAGTCCCTGGACAATTGCTGTTGAATCAAATCGTCTCTCTGTGTGAAATATACGAAAAACTGCAGTCCAACATATTGTTTTTATATTCGCCACAAAGAATACATTTGAGTTTCACTATTCGAAACATATTTGAGGCTATGAATAATGAAGATAAGTTGAAACTGTACAAACAATTTAGTGCACAAAATGAAAAAAATGTAAGGATATTGGCAGTTTTAGGTGTTGAAAATTTACCTGCGACGCTCCGAAGTAAGGTTGAGGACGATGTTCTAGATAAAGTAATGGAAATTCAAAAATATATTGATAATGGAACTGGCCTTGTTGATGTCGACAAATTGATTAGTACAATGAATCTGGCGGCAACGTGTACACACAAAAGTGATAGAAGGATATTGGAATTTATTACAAGAGGTTGGGAGAGAGTTTGTCCTGAAAATAACGATATTTTACAATCTAAATTGAATACAGGATCCTTGTGGTACTTACAGTATTTAGAGGCGTTGATGTCAATGACGTCCACCGAAAGTATAACAAGATATCAAAGTTCTTTGACAGGAAAGATCCTTCATGCAATCTCAGGTTTAATGGAAACTAATAATGAAGAATATCAAATATTATTGATCGGTTTCATGTGTCGTTTAGCATCATTCGATATTCAAGATGATTATAAATTTATAGAAAACATTCTAGAAAAATTTAAAGCATTGTTAAAAGATTCAACAACAGCAAAAATAGCTCTTAAAAAATTACAACACATGAAAAATAACAAGAATGTTGATAGAGTTTTAAGAAAATTAATCAGAGAGGATCCTTCTTTGGGAGATTTTTTAAAAACTGAAATAGATGATCACATTTTGCTAACCAACAATGTTACGTTCCATCATAAATGCTTACAAAATGCTGATGTTCCTTTAAAAAGCTCCAAAAAAACATGTAGCGGTAATTTCGATTTAGCGGACATGGACACGATGTTTGAAAACGAAAGTGAATCTCAGCCGCTCTTTGTAGCATAA

Protein

MNNSQSSDFFDESGDISCASPKLISDEVHDGLSHDDLISKTKFALSGGFRKELKKPTFYNYILSLLDDCGKCISQSLDLIISTLSETTISVDVLVEHLMDAVSILQMLSECIKTVIEVAVMSCCRIQNFPTATSRILMIVFMHCRDSEELYGNVLKNVENQLKDLFRACHELQLTYLMVIEKNFAFDLTEREHLLILFDALEINLKIGELVQTLDIKTMAEQWKGLIAVYEKYSTALIDTNIFNDCTAVLCGMIENNLKTALQANQDEKSILRSLKVTGFTLKILVKICIIFRLASVKKHQHLVDLLIFIIMNCNTSSENSERDNNTINTYVLNPSETLLNELMLDENFNNTILNCNIENLLRERKLSGFVSLLMYLMKTIVHKKNTKISKKRIIECVYGFLPYCQTILKHSRSTYEDLLVKMAALIMIMDNEEFEFLERRMLEAILGTECFSALFSSNLWSLMGRIVPGQLLLNQIVSLCEIYEKLQSNILFLYSPQRIHLSFTIRNIFEAMNNEDKLKLYKQFSAQNEKNVRILAVLGVENLPATLRSKVEDDVLDKVMEIQKYIDNGTGLVDVDKLISTMNLAATCTHKSDRRILEFITRGWERVCPENNDILQSKLNTGSLWYLQYLEALMSMTSTESITRYQSSLTGKILHAISGLMETNNEEYQILLIGFMCRLASFDIQDDYKFIENILEKFKALLKDSTTAKIALKKLQHMKNNKNVDRVLRKLIREDPSLGDFLKTEIDDHILLTNNVTFHHKCLQNADVPLKSSKKTCSGNFDLADMDTMFENESESQPLFVA

Uniprot

A0A2A4JDL2   A0A2W1BXI1   A0A1E1WTK2   A0A067R9Z9   A0A1B6CYC8   A0A088A5N8   + More
W5LZV5   A0A1W5A8U3   A0A0P7U2S2   M4AFP6   A0A3Q1ARG8   A0A3N0YCB9   A0A0S7HC43   A0A0S7H827   A0A3B3TVU7   A0A3B3X6B6   A0A087YKQ0   G3HYM5   A0A3P9P3L0   A0A3Q3G0G3   A0A3P8UF09   A0A3B4CH58   A0A1S3KKM6   A0A1S3KKD6   A0A1S3KKS3   F6WQR8   A0A2R9AG57   A0A315VC40   A0A1U7QNW5   A0A3P9BMT3   A0A3P8UD54   A0A3P8N5M3  

Pubmed

28756777    24845553    23542700    21804562    18464734    22722832    + More
29703783    25186727    24487278   

EMBL

NWSH01001807    PCG70061.1    KZ149917    PZC77927.1    GDQN01000888    JAT90166.1    + More
KK852598    KDR20530.1    GEDC01018900    JAS18398.1    AHAT01034679    JARO02004478    KPP68459.1    RJVU01048406    ROL43470.1    GBYX01444277    JAO37139.1    GBYX01444281    JAO37135.1    AYCK01007476    JH000933    EGW11266.1    AJFE02086953    AJFE02086954    AJFE02086955    NHOQ01001926    PWA20897.1   

Proteomes

UP000218220    UP000027135    UP000005203    UP000018468    UP000192224    UP000034805    + More
UP000002852    UP000257160    UP000261500    UP000261480    UP000028760    UP000001075    UP000242638    UP000261660    UP000265080    UP000261440    UP000087266    UP000002279    UP000240080    UP000189706    UP000265160    UP000265120    UP000265100   

PRIDE

G3HYM5   

Pfam

PF14868   DUF4487        + More
PF03281   Mab-21
PF00100   Zona_pellucida

Interpro

IPR027902   DUF4487        + More
IPR016024   ARM-type_fold       
IPR024810   Mab-21_dom       
IPR001507   ZP_dom       

SUPFAM

SSF48371   SSF48371       

ProteinModelPortal

A0A2A4JDL2   A0A2W1BXI1   A0A1E1WTK2   A0A067R9Z9   A0A1B6CYC8   A0A088A5N8   + More
W5LZV5   A0A1W5A8U3   A0A0P7U2S2   M4AFP6   A0A3Q1ARG8   A0A3N0YCB9   A0A0S7HC43   A0A0S7H827   A0A3B3TVU7   A0A3B3X6B6   A0A087YKQ0   G3HYM5   A0A3P9P3L0   A0A3Q3G0G3   A0A3P8UF09   A0A3B4CH58   A0A1S3KKM6   A0A1S3KKD6   A0A1S3KKS3   F6WQR8   A0A2R9AG57   A0A315VC40   A0A1U7QNW5   A0A3P9BMT3   A0A3P8UD54   A0A3P8N5M3  

KEGG

101735408    no KO assigned | (RefSeq) uncharacterized protein C1orf112 homolog

GO

Length:

803

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0466200000000002

Exp number, first 60 AAs:

3e-05

Total prob of N-in:

0.00147

outside

1  -  803

 

 

Pi

178.494918

Theta

155.59575

Tajima's D

0.658312

CLR

0.000166

CSRT

0.55797210139493

Interpretation

Uncertain