Silkworm Genome Informatics Database

Gene

KWMTBOMO11568

Pre Gene Modal

BGIBMGA004089

Annotation

PREDICTED:_tyrosine-protein_kinase_Src42A-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(+):8594808-8626562 View in EpiBrowser

Location in the cell

Nuclear Reliability : 3.336

CDS

ATGGTGTCTGAGGGGGCTTTGCCCGTAGTGTGGTGTATACGCGATAATCAACTTGTGCCGCATCAGGTATCCGGTGTAAAATTACAAGGAGCTGTTACCGGAGCGCATATAGCTGCAGTTACTGATTTCTTGCGAATGGTCGCCGGTACTCCGATAGTTCTACCACATACTTCTGTTACAGAAGACCTTGAAAATGATATCAATCAACAGAAAGAAAATTCTACAAGAAGACGTAAAATGTCTATGCAAGTGGAAGTGCCATGTGTATTCCTCTCTGAAAGTGCGCTACAGAAGGCGAAAAGTCGTAATAATTCTCGTGAGGAAAAGGTAACAACATTTGAAAATTTGTCAGCGGTAGCTAAAAAACTTTTAGAATTAGAAAATGCACCAATTCTATCGAATGGTTTAGAATATATTGACACGCAGGAGCCTTTGGAGGATCTTTGTGTAGAAGTAAATACTATAAAACAAAAATCTATAGATACTAAAACCACAAATCACGACATCATTTCACAAAGAATAACTAGAATAATAGATCTGAATGATGGGTTAGAAACCAACAATATGGGTCACATTGAGTGTGAACAAGAATCACCCCAAAGAATCACGAGAATCATTGAATTTGAAAATGATAAAACTACAAAATTCATAGAAAATGAAACACCGCAAAGAATTACTAGAATTATAGAACTTAACGAAGATAATTCTTTTTCAACAATCACAGAAAATCATGAAACTGATTCAAGTCAAAAGTTAAGTCGAATAGATGAATTAGAGAAAGAAAATGTTTTTCCTAGCATGACAAAAATTATCGAAATGGAGAATGTTATCTCAAATGAACGAAGAATCTCTTTAACAAACGAACGTGAAACTGGTGGTGGCAAAATTGAGCCTTCTTGCGATGAAGTTATTGTAAGGTCTAGGTATATTCATAAAAGTGCCCCTAGGTTTAGTCTTGATTCCTCTTGCTCCGAAAACTCTTACGTTAATATTGACTGCCTGAAGAGTTTGCAGGATGTTAAAAAAGAGGACATTGTGGATGTAAGCGCGAACACTGAAACTTCACCCACTAGTAGATGTATTCGTTCTCGCTTTCCACGAAAAAAAACTTCTGTCTGTTCAATTGGTTCATCTGATTGCGATGATGAAGTCGATGTGATATTCAAATCTAAACCTAAATCTAGTCAGTGGGTAAGTTTGGATTGGATTCCGCCTCCGCCAAAAGAAGATCCAGTGATTGCACAAGTCTGTGATAAAAATGATTTCATTACGAAATGGATAGCTGATCAAAATTCGGTGATCGTTGCCGACGAAAGAAGAAAAAGTCTTCCACCAAAATCTAATGAAATTTATTTACAAAACATGAGGAGGTTTAGTGATGGTCTACAAATATGTAAAGAAGATGCAGCCAGTGATTCGCCCGCTACAGTGAAATGGAAGTGGCAAGATCTCGTCAAACGCCACATCCAGTTACTTAAATCTGACAAAGGATTCCGACGACAAAGAGGCAGCTGGATGCGAACTGCAAGGCGCATGTCTGGAACTAGCGATAACAATAAGAACTTGGACACACAGAATTTGTATGCCCACATGAAATTAAATAATATGCTATGGTACTTCCGCAAAATAAAACGGATCGAAGCGGAAAAGAAACTGTTACTACCCGAAAACGAGCATGGCGCTTTCCTTATCCGTGATTCTGAGAGCCGCCACAATGACTTCTCACTATCAGTACGAGACGGTGACACAGTGAAACACTATCGCATCCGGCAACTGGACGAGGGAGGGTTTTTCATAGCCCGACGCACAACCTTCCGCACACTTCAAGAACTCGTCGAGCACTACAGCAAGGACGCAGACGGACTATGCGTCGCCCTCAATAAACCTTGCGTTCAGATCGAGAAACCGGTGACAGAAGGCCTGTCTCACAGAACACGTGATCAATGGGAAATCGATCGTGCATCATTGAAGTTTGTTCGGAAACTCGGCCACGGTCAGTTCGGAGAAGTATGGGAAGGATTGTGGAACAACACGACTCCGGTCGCGGTGAAAACTCTCAAATCCGGCACAATGGACCCAAAGGATTTCCTCGCTGAAGCGCAAATCATGAAGAAGCTGAGGCACAACAAACTAATCCAGCTATACGCTGTGTGTACTCTTGAAGAGCCTATCTACATAATCACCGAACTCATGAAACACGGTTCTTTATTGGATTATTTACAAGGTAAAGGTCGCGGTCTGAAACTGCAGCAGCTGATCGACATGGCAGCCCAGATAGCGGCCGGCATGGCGTATCTGGAATCGCAGAACTACATCCACCGAGACCTCGCGGCCAGGAACGTCCTCGTGGGCGACGGTAACATCGTCAAGATCGCCGACTTCGGACTGGCCAGACTGATCAAAGAAGACGAATACGAAGCTCGCGTGGGTGCAAGGTTCCCTATAAAATGGACAGCACCCGAAGCGGCGAACTACAGCAAGTTTTCAATCAAATCTGACGTCTGGTCGTTTGGAATCCTGCTTACTGAGCTCGTCACGTACGGCCGGACCCCTTACCCAGGCATGACCAATGCTGAAGTACTACACCAAGTGGAACACGGGTACCGCATGCCGTGCCCGCAGAATTGTCTGCCGGCCCTCTACGAAATCATGCTGGAGTGTTGGCACAAGGATCCCCTCAAACGGCCCACCTTCGAGACCCTGCAGTGGAAGCTCGAAGACTTCTTCACCATGGACAACTCGGAGTACAAGGAGGCGTCCACCTACTGA

Protein

MVSEGALPVVWCIRDNQLVPHQVSGVKLQGAVTGAHIAAVTDFLRMVAGTPIVLPHTSVTEDLENDINQQKENSTRRRKMSMQVEVPCVFLSESALQKAKSRNNSREEKVTTFENLSAVAKKLLELENAPILSNGLEYIDTQEPLEDLCVEVNTIKQKSIDTKTTNHDIISQRITRIIDLNDGLETNNMGHIECEQESPQRITRIIEFENDKTTKFIENETPQRITRIIELNEDNSFSTITENHETDSSQKLSRIDELEKENVFPSMTKIIEMENVISNERRISLTNERETGGGKIEPSCDEVIVRSRYIHKSAPRFSLDSSCSENSYVNIDCLKSLQDVKKEDIVDVSANTETSPTSRCIRSRFPRKKTSVCSIGSSDCDDEVDVIFKSKPKSSQWVSLDWIPPPPKEDPVIAQVCDKNDFITKWIADQNSVIVADERRKSLPPKSNEIYLQNMRRFSDGLQICKEDAASDSPATVKWKWQDLVKRHIQLLKSDKGFRRQRGSWMRTARRMSGTSDNNKNLDTQNLYAHMKLNNMLWYFRKIKRIEAEKKLLLPENEHGAFLIRDSESRHNDFSLSVRDGDTVKHYRIRQLDEGGFFIARRTTFRTLQELVEHYSKDADGLCVALNKPCVQIEKPVTEGLSHRTRDQWEIDRASLKFVRKLGHGQFGEVWEGLWNNTTPVAVKTLKSGTMDPKDFLAEAQIMKKLRHNKLIQLYAVCTLEEPIYIITELMKHGSLLDYLQGKGRGLKLQQLIDMAAQIAAGMAYLESQNYIHRDLAARNVLVGDGNIVKIADFGLARLIKEDEYEARVGARFPIKWTAPEAANYSKFSIKSDVWSFGILLTELVTYGRTPYPGMTNAEVLHQVEHGYRMPCPQNCLPALYEIMLECWHKDPLKRPTFETLQWKLEDFFTMDNSEYKEASTY

Uniprot

A0A2H1V7K9

EMBL

ODYU01001087 SOQ36833.1

Pfam

PF00017 SH2

Interpro

IPR036860 SH2_dom_sf + More
IPR000980 SH2

SUPFAM

SSF55550 SSF55550

Gene 3D

3.30.505.10

ProteinModelPortal

A0A2H1V7K9

PDB

2PTK E-value=1.62077e-135, Score=1240

KEGG

100862655 K08892 fyn-related kinase [EC:2.7.10.2] | (RefSeq) SRC; tyrosine-protein kinase Src42A-like

PATHWAY

04013 MAPK signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0004672 GO:0006468 GO:0004713 GO:0005524 GO:0004888 GO:0007166 GO:0003707 GO:0006418 GO:0003824

Length:

922

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0105

Exp number, first 60 AAs:

0.00454

Total prob of N-in:

0.00022

outside

1 - 922

Pi

164.331234

Theta

158.1207

Tajima's D

0.045568

CLR

0.699348

CSRT

0.375131243437828

Interpretation

Possibly Positive selection

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics