Gene

KWMTBOMO11566

Pre Gene Modal

BGIBMGA004032

Annotation

neuropeptide_receptor_A20_[Bombyx_mori]

Location

Bomo_Chr19(-):8420607-8431577      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.726

CDS

ATGCTGTCGGAAAACGAAACCCGAAGTAGTTACGACACTCAGACAAATCTTTCCCACATCTCCGGCAATTTGTTTGAAGATGCCAGTATAAATTCCCTATTGAACCACGGCGGGAATTACACTACAAACATCGGACAAGTGCTCAAAGTGCTCGAAGATTGGAGAAACAGATTCAATATAACCGTTGTTAAAGAATGCGATGGAACAGAATACTGCGCTGGGGAGTTCCGAGATTTGATAATAGCATACAACAGTATTCACGGCTACGTCAGTTTGTTGGTCTGTCTTTTTGGTAGTCTCGCCAACGCTTTTAATGTAGCCGTGCTGACGAGGCGAGATCTCGCAGTGGCTCCCATAAATCGACTGCTAAAATGGCTTGCAGTAGCTGACGTCTTCGTCATGATTGAGTATGTTCCATTCGCTATCTACAGGTATTTGTTGTTACCCGGTCAAGAAGACCGTCCATACTCCTGGGCTGCATATATGCTGTTTCATATGCACTTCACGCAGATATTCCATACAGCGTCAATACTGTTAACCTTGTCTCTGGCAGTTTGGCGATATCTTGCAATCAAATATCCGGCTCACAGTCCAATATTATGCACAGATAGGCGATGCACAGTGGCCATAATGTTGAGTTTTGTGCTTCCCTCTATACTCTGCATACCATCGTACTTTGTCTTCACAATCCATAAAGACTTCTCATACGACAGGAACGCCAACGTTTTCTCGAAAGTTTATTTCGTAGATTCCGATTTCGACGGATACCTCTATCATATTAATTTCTGGATCGACAAAACGGTCTAA

Protein

MLSENETRSSYDTQTNLSHISGNLFEDASINSLLNHGGNYTTNIGQVLKVLEDWRNRFNITVVKECDGTEYCAGEFRDLIIAYNSIHGYVSLLVCLFGSLANAFNVAVLTRRDLAVAPINRLLKWLAVADVFVMIEYVPFAIYRYLLLPGQEDRPYSWAAYMLFHMHFTQIFHTASILLTLSLAVWRYLAIKYPAHSPILCTDRRCTVAIMLSFVLPSILCIPSYFVFTIHKDFSYDRNANVFSKVYFVDSDFDGYLYHINFWIDKTV

Uniprot

B3XXN3   A0A2A4JF21   A0A2W1BS69   H9J3E5   A0A194QCR1   A0A194QVS4   + More
A0A212EX53   A0A2H1VIC9   A0A0N0P9E7   A0A0S1YD84   A0A2W1BU96   A0A194QJU0   B3XXL5   A0A2W1BS81   A0A194QVY6   A0A0S1YD68   A0A212FLW4   B3XXM1   A0A194QK98   A0A0S1YD70   A0A3S2LDK4   A0A182FEC0   A0A084W9M0   A0A182PTL8   A0A182HXV4   A0A182WS57   Q7PPU4   A0A182GLH9   A0A1B0GIH6   E2A775   A0A182IL33   E0VMH3   A0A182YBX8   A0A182NV16   A0A182K6S2   A0A1A9W2D3   A0A182QC09   A0A0C9R9E7   A0A182RYZ1   A0A0L0BRH5   A0A182WMI1   A0A0Q9WB25   A0A1A9Z260   B0WHK7   A0A1A9V040   A0A1A9Y7I5   A0A1B0GFF7   A0A1B0BG75   A0A0C9R2H4   Q7JVS8   B4P7L2   B4HN36   B4ME18   A0A1W4UI32   A0A182RY01   B4QB29   B4KQ21   A0A034WSM1   A0A0K8U7M5   F8J1K8   A0A088A650   B4J7X1   A0A2A3EJ03   B3NSN7   A0A182LHV6   B4H6C2   Q28WS2   B3MEQ2   A0A1I8PDP1   A0A0K8WGQ5   A0A1I8MJD1   B4MK79   A0A1S4FJS5   Q16YF4   A0A1B6I7F6   A0A0R3NPY6   U3U8X9   D6WTY0   A0A0J7KTA3   K7J443   A0A336LPL8   E2BHK2   A0A0M5IZK7   A0A1Y1MWW1   A0A139WAQ6   D6X512   A0A3B0J3V8   A0A1B6ECD2   T1J538  

Pubmed

18725956    28756777    19121390    26354079    22118469    24438588    + More
12364791    14747013    17210077    26483478    20798317    20566863    25244985    26108605    17994087    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    18057021    22936249    25348373    20966253    15632085    25315136    17510324    23185243    23932938    18054377    18025266    18316733    20068045    21843505    23604020    20075255    28004739    18362917    19820115   

EMBL

AB330441    BAG68419.1    NWSH01001613    PCG70685.1    KZ149917    PZC77922.1    + More
BABH01021493    KQ459185    KPJ03328.1    KQ461073    KPJ09633.1    AGBW02011827    OWR46065.1    ODYU01002477    SOQ40014.1    KQ459476    KPJ00089.1    KT031018    RSAL01000235    ALM88316.1    RVE43771.1    PZC77921.1    KQ458575    KPJ05797.1    AB330423    BAG68401.1    PZC77918.1    KPJ09637.1    KT031000    ALM88298.1    AGBW02007701    OWR54690.1    AB330429    BAG68407.1    KPJ05799.1    KT031006    ALM88304.1    RSAL01000034    RVE51426.1    ATLV01021836    ATLV01021837    ATLV01021838    KE525324    KFB46914.1    APCN01005356    AY856701    AAAB01008905    AAX98671.1    EAA09746.4    JXUM01072193    JXUM01072194    JXUM01072195    JXUM01072196    KQ562707    KXJ75297.1    AJWK01014143    GL437267    EFN70731.1    DS235308    EEB14579.1    AXCN02001008    GBYB01013034    JAG82801.1    JRES01001578    KNC21819.1    CH940662    KRF78484.1    DS231938    EDS27856.1    CCAG010016793    JXJN01013792    GBYB01002190    JAG71957.1    AE013599    AY099098    AY118700    BT081415    AAF58717.1    AAM28948.1    AAM50560.1    ACO51546.1    CM000158    EDW90047.1    KRJ98877.1    CH480816    EDW47340.1    EDW58783.1    KRF78481.1    KRF78482.1    KRF78483.1    KRF78485.1    CM000362    CM002911    EDX06562.1    KMY92906.1    CH933808    EDW08123.1    KRG03939.1    KRG03940.1    KRG03941.1    GAKP01000376    JAC58576.1    GDHF01029738    JAI22576.1    EU785051    ACI90288.1    CH916367    EDW01177.1    KZ288229    PBC31700.1    CH954179    EDV56539.1    CH479213    EDW33346.1    CM000071    EAL26595.1    CH902619    EDV35516.1    GDHF01002090    JAI50224.1    CH963846    EDW72518.1    CH477517    EAT39649.2    GECU01024873    JAS82833.1    KRT03200.1    KRT03201.1    AB817285    BAO01052.1    BK006095    DAA64476.1    LBMM01003344    KMQ93627.1    AAZX01000986    UFQT01000102    SSX20012.1    GL448301    EFN84855.1    CP012524    ALC41748.1    GEZM01018629    JAV90113.1    KQ971381    KYB24979.1    BK006093    DAA64474.1    OUUW01000001    SPP73982.1    GEDC01012998    GEDC01008232    GEDC01001774    GEDC01000521    JAS24300.1    JAS29066.1    JAS35524.1    JAS36777.1    JH431850   

Proteomes

UP000218220    UP000005204    UP000053268    UP000053240    UP000007151    UP000283053    + More
UP000069272    UP000030765    UP000075885    UP000075840    UP000076407    UP000007062    UP000069940    UP000249989    UP000092461    UP000000311    UP000075880    UP000009046    UP000076408    UP000075884    UP000075881    UP000091820    UP000075886    UP000075900    UP000037069    UP000075920    UP000008792    UP000092445    UP000002320    UP000078200    UP000092443    UP000092444    UP000092460    UP000000803    UP000002282    UP000001292    UP000192221    UP000000304    UP000009192    UP000005203    UP000001070    UP000242457    UP000008711    UP000075882    UP000008744    UP000001819    UP000007801    UP000095300    UP000095301    UP000007798    UP000008820    UP000036403    UP000002358    UP000008237    UP000092553    UP000007266    UP000268350   

PRIDE

B3XXN3    H9J3E5    B3XXL5    B3XXM1    Q7JVS8   

Pfam

PF10324   7TM_GPCR_Srw        + More
PF00001   7tm_1

Interpro

IPR019427   7TM_GPCR_serpentine_rcpt_Srw        + More
IPR000276   GPCR_Rhodpsn       
IPR017452   GPCR_Rhodpsn_7TM       

ProteinModelPortal

B3XXN3   A0A2A4JF21   A0A2W1BS69   H9J3E5   A0A194QCR1   A0A194QVS4   + More
A0A212EX53   A0A2H1VIC9   A0A0N0P9E7   A0A0S1YD84   A0A2W1BU96   A0A194QJU0   B3XXL5   A0A2W1BS81   A0A194QVY6   A0A0S1YD68   A0A212FLW4   B3XXM1   A0A194QK98   A0A0S1YD70   A0A3S2LDK4   A0A182FEC0   A0A084W9M0   A0A182PTL8   A0A182HXV4   A0A182WS57   Q7PPU4   A0A182GLH9   A0A1B0GIH6   E2A775   A0A182IL33   E0VMH3   A0A182YBX8   A0A182NV16   A0A182K6S2   A0A1A9W2D3   A0A182QC09   A0A0C9R9E7   A0A182RYZ1   A0A0L0BRH5   A0A182WMI1   A0A0Q9WB25   A0A1A9Z260   B0WHK7   A0A1A9V040   A0A1A9Y7I5   A0A1B0GFF7   A0A1B0BG75   A0A0C9R2H4   Q7JVS8   B4P7L2   B4HN36   B4ME18   A0A1W4UI32   A0A182RY01   B4QB29   B4KQ21   A0A034WSM1   A0A0K8U7M5   F8J1K8   A0A088A650   B4J7X1   A0A2A3EJ03   B3NSN7   A0A182LHV6   B4H6C2   Q28WS2   B3MEQ2   A0A1I8PDP1   A0A0K8WGQ5   A0A1I8MJD1   B4MK79   A0A1S4FJS5   Q16YF4   A0A1B6I7F6   A0A0R3NPY6   U3U8X9   D6WTY0   A0A0J7KTA3   K7J443   A0A336LPL8   E2BHK2   A0A0M5IZK7   A0A1Y1MWW1   A0A139WAQ6   D6X512   A0A3B0J3V8   A0A1B6ECD2   T1J538  

PDB

5N2S     E-value=0.00343092,     Score=93

KEGG

100174931    no KO assigned | (RefSeq) NGR-A20, BNGR-A20; neuropeptide receptor A20

GO

GO:0016021   GO:0007218   GO:0008528   GO:0004930   GO:0007186   GO:0008188   GO:0004713   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

Length:

268

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

89.35966

Exp number, first 60 AAs:

0.00395

Total prob of N-in:

0.08923

inside

1  -  88

TMhelix

89  -  111

outside

112  -  125

TMhelix

126  -  148

inside

149  -  168

TMhelix

169  -  191

outside

192  -  205

TMhelix

206  -  228

inside

229  -  268

 

 

Pi

3.998005

Theta

167.022715

Tajima's D

-0.853133

CLR

327.945379

CSRT

0.165591720413979

Interpretation

Uncertain