SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11564
Pre Gene Modal
BGIBMGA004085
Annotation
neuropeptide_receptor_A8_[Bombyx_mori]
Location in the cell
PlasmaMembrane   Reliability : 4.846
 

Sequence

CDS
ATGAACATTGCGGTGCTGACGCGACGAGATATGGCAGCTGCTCCGATAAACAGGTTGCTGAAGTGGCTAGCCGTTGCAGACGTATTCGTCATGATCGAGTACATGCCATTTGTAATATACCGACATTTGGTCCTGCCAGAGAAATTGGATTTCCCTTATTCGTGGGCGATGTATTTGTTATTCCACATGCACTTCGCCCAAATATTGCACACTGCATCAATATGTCTGACACTTTCATTGGCTATTTGGAGATACATCGCGATAAAGTATTCGGATCGAAGTCACATACTGTGCACGGAGCGGCGGTGTAGCATCGCAATACTCACGAGCTTCATATTGCCCCCGATACTGTGCACGCCAACGTTTATGGTCTTTGACATTCATACGAAGAACGTCACGAATGCTGACGGAAATCCTGACATCGCATACCATGTCGATTCAGACTATCAGGGGACACTTTATCAAGCCAACTTTTGGGTGCATGGCGTCGTCATCAAATTGCTGCCCTGTTCAATACTCACTGTCATAAGTATATGGCTTATCAAGGCTTTATATAAAGCAAATCAGCATCAAAAAAACTTAAGGAACTATAGTGCCTGTCCGGCCGCAGAGAAAATGGTGAAGAGACAGAACAAAGCTGATAAAAGAACTGATAGGACAACTAAAATGTTATTAGCTGTCCTTCTATTGTTCCTGGTCACAGAGCTACCTCAAGGCATACTGGGACTTATGAGTGGCCTATTAGGTTGGTGTTTCTTCAAACGTTGCTACGATTTATTTGGAGAGTTAATGGATTTTCTGGCGCTACTGAATGGAGCGATAAATTTTATATTATACTGCACGATGTCGCGGCAATTCCGGCAGACCTTCAGGCAGATGTTGCTGCAACCGCCATTGGCACGTTTCCTGCCGCCGACCGCCTCCCACTCCGAGTCCCACAATCAAAACACCATGAAGACTTCTATACCTTGA
Protein
MNIAVLTRRDMAAAPINRLLKWLAVADVFVMIEYMPFVIYRHLVLPEKLDFPYSWAMYLLFHMHFAQILHTASICLTLSLAIWRYIAIKYSDRSHILCTERRCSIAILTSFILPPILCTPTFMVFDIHTKNVTNADGNPDIAYHVDSDYQGTLYQANFWVHGVVIKLLPCSILTVISIWLIKALYKANQHQKNLRNYSACPAAEKMVKRQNKADKRTDRTTKMLLAVLLLFLVTELPQGILGLMSGLLGWCFFKRCYDLFGELMDFLALLNGAINFILYCTMSRQFRQTFRQMLLQPPLARFLPPTASHSESHNQNTMKTSIP

Summary

EMBL
AB330429    BAG68407.1    BABH01021464    BABH01021465    NWSH01000743    PCG74460.1    + More
KZ149917    PZC77918.1    ODYU01001844    SOQ38600.1    AGBW02007701    OWR54690.1    KQ458575    KPJ05799.1    RSAL01000034    RVE51426.1    KT031006    ALM88304.1    AB330423    BAG68401.1    PZC77921.1    KT031000    ALM88298.1    KPJ05797.1    AGBW02011827    OWR46065.1    KQ461073    KPJ09637.1    NWSH01001613    PCG70685.1    PZC77922.1    KQ459185    KPJ03328.1    KPJ09633.1    JTDY01001997    KOB72367.1    AB330441    BAG68419.1    KT031018    RSAL01000235    ALM88316.1    RVE43771.1    NWSH01003041    PCG67067.1    GBYB01002190    JAG71957.1    BABH01021474    BABH01021475    BABH01021476    KZ288229    PBC31700.1    EU785051    ACI90288.1    DS235308    EEB14579.1    GL437267    EFN70731.1    JTDY01002545    KOB71206.1    GEZM01018629    JAV90113.1    AB817285    BAO01052.1    DS231938    EDS27856.1    AJWK01014143    BK006095    DAA64476.1    GECU01024873    JAS82833.1    GL448301    EFN84855.1    APCN01005356    JRES01001578    KNC21819.1    AXCN02001008    ATLV01021836    ATLV01021837    ATLV01021838    KE525324    KFB46914.1    AAZX01000986    AY856701    AAAB01008905    AAX98671.1    EAA09746.4    GDHF01029738    JAI22576.1    GAKP01000376    JAC58576.1    JXJN01013792    CCAG010016793    GFXV01004466    MBW16271.1    BK006093    DAA64474.1    ABLF02030623    ABLF02030627    CH477517    EAT39649.2    CH479213    EDW33346.1    KI208312    KI209541    ERL95834.1    ERL96055.1    CM000071    EAL26595.1    CM000158    EDW90047.1    KRJ98877.1    CM000362    CM002911    EDX06562.1    KMY92906.1    CH480816    EDW47340.1    AE013599    AY099098    AY118700    BT081415    AAF58717.1    AAM28948.1    AAM50560.1    ACO51546.1    CH954179    EDV56539.1    UFQT01000102    SSX20012.1    CH902619    EDV35516.1    KQ971381    KYB24979.1    KRT03200.1    KRT03201.1    MG550192    AWT50626.1    KI209861    ERL96102.1    KB632300    ERL91752.1    APGK01034986    KB740923    ENN78122.1    CH963846    EDW72518.1    CH940662    EDW58783.1    KRF78481.1    KRF78482.1    KRF78483.1    KRF78485.1    CH933808    EDW08123.1    KRG03939.1    KRG03940.1    KRG03941.1    OUUW01000001    SPP73982.1    CP012524    ALC41748.1    CH916367    EDW01177.1    JH431850    KC004226    AGT02812.1    CH477383    EAT42153.2   
Pfam
PF10324   7TM_GPCR_Srw        + More
PF00001   7tm_1
PF13181   TPR_8
Interpro
IPR000276   GPCR_Rhodpsn        + More
IPR017452   GPCR_Rhodpsn_7TM       
IPR019427   7TM_GPCR_serpentine_rcpt_Srw       
IPR013026   TPR-contain_dom       
IPR019734   TPR_repeat       
IPR011990   TPR-like_helical_dom_sf       
SUPFAM
SSF48452   SSF48452       
Gene 3D

Ontologies

Topology

Length:
323
Number of predicted TMHs:
6
Exp number of AAs in TMHs:
133.3168
Exp number, first 60 AAs:
22.45907
Total prob of N-in:
0.99844
POSSIBLE N-term signal
sequence
inside
1  -  18
TMhelix
19  -  41
outside
42  -  60
TMhelix
61  -  83
inside
84  -  102
TMhelix
103  -  125
outside
126  -  158
TMhelix
159  -  181
inside
182  -  223
TMhelix
224  -  246
outside
247  -  260
TMhelix
261  -  283
inside
284  -  323
 
 

Population Genetic Test Statistics

Pi
217.9439
Theta
168.508441
Tajima's D
0.897565
CLR
0.090135
CSRT
0.635368231588421
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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