Gene

KWMTBOMO11559

Pre Gene Modal

BGIBMGA004081

Annotation

PREDICTED:_proton-coupled_folate_transporter-like_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(+):8027365-8043379      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.967

CDS

ATGACTGAAATTGAGAATCATCATCTGGAAAATGGATCAGCAGTCAGGTCTATGGTCCAAAATACACCAAGAAAGTTCCACTTGACTATGGAAGTTCCAATGTGCCTAACCATGCTAAGCTTGTCATTAACAGGCGCTGCTGTTAGCAACATTTTACTATACAGGACATGCTTGCATAGTTTGAACCATCCAGACTCTGTGTGTAAGGTTTTTCTTGCACTCGACAAGACGAACCAAACAGATGAATTAGAAAAAGAAGTGCAGAGATACGCGACCGTAGTGAATACCGTAAAAAGTATAATAGAAGCTGTTGCACCGGCAGTTTTATCTCTATTTATGGGTGTGTGGTCTGATACCCACGGCAGAAAACCTCTGGTTGTATGGCCACTTTTTGGCATGGCAATGACTGGAATGATGCTGGTGGTGTATAGCACTATGAACGACTTGGGCCCTTGGTGGTTGATAGTAACTGCCGTTCCATATTCGCTAACCGGCGGCATGATCATATTATTTACTGGAGCTTTTTGTTACGTAAGTGACGTCACATCCCCGGAGAACAGATCCCTTAGAATGACTATACTGGGGGCATCTGTTTCTGCTGGAAGCGTACTGGGAGGACTATTTAGTGCCCATTTGCTTAGGGCCGTCGGGAATGTGTATTTACTGTTGATAGGAGCATCTTTAAATGTATTTGCGTACGCCTTTACAAATATATTTCTAAGGGAATCATTGGAAGGAGCTATACAGGGGCGGCTCGGTACCCTATTAGATTGGTCTTTAGTGAAACAGATGGCACGCGAATGTTTCAAGAAACGGCCTAACTTCGGTAGAGCACAGATCCTGCTCCTCACCGTTGCGAACAGTCTAACGATATTCATATTATACGGTTCCATGAATTTGGAATATCTGTACACGAGAGAGAAACTGCGCTGGGCTCTGAAAGACTACACGTTATATTCGGCCTTGAGCACGACGATATCGTTCGCGGGCGGTTTCTTGGGCATTATAGTTGTGCAGAAGTTACTGAAGATCGGCGATCTGGCCTTTGTGAACGTCGCTTATCTCTCGATGATCGTCGAGTACGTCGTGAAAGCGCTTGCAGTTTCAACGTGGCATATGTATTTGAGTTCCACTATATCGTTGTTCAAAGGGCTATCGTCACCGCTATTGAGGTCGTTGTTGACAAAAATACTGCCTATCAGTGATATCGCTAAAGTATTCGCGCTAATGTCGGCTATTGAGGGCTTATGCCCTTTACTGTCTCCGCTTCTGTACAATTCCTTATACGAATGCACGATATCAACATTCCCGGCGGCTTTTTATATGCTCAGCATTGGGATCGTGTGCGTATCTTGCACGTTTATTGGATTAGTACAATATTTCAGAAGGAATGTGTCAACGCCCTATGAGAGGTTGCAAGATTCACCAACGATTGCATAA

Protein

MTEIENHHLENGSAVRSMVQNTPRKFHLTMEVPMCLTMLSLSLTGAAVSNILLYRTCLHSLNHPDSVCKVFLALDKTNQTDELEKEVQRYATVVNTVKSIIEAVAPAVLSLFMGVWSDTHGRKPLVVWPLFGMAMTGMMLVVYSTMNDLGPWWLIVTAVPYSLTGGMIILFTGAFCYVSDVTSPENRSLRMTILGASVSAGSVLGGLFSAHLLRAVGNVYLLLIGASLNVFAYAFTNIFLRESLEGAIQGRLGTLLDWSLVKQMARECFKKRPNFGRAQILLLTVANSLTIFILYGSMNLEYLYTREKLRWALKDYTLYSALSTTISFAGGFLGIIVVQKLLKIGDLAFVNVAYLSMIVEYVVKALAVSTWHMYLSSTISLFKGLSSPLLRSLLTKILPISDIAKVFALMSAIEGLCPLLSPLLYNSLYECTISTFPAAFYMLSIGIVCVSCTFIGLVQYFRRNVSTPYERLQDSPTIA

Uniprot

A0A2W1BW92   A0A212FJR3   A0A2H1W9A6   A0A2A4JNQ2   A0A3S2NSY9   A0A194QJP3   + More
A0A194R1C0   H9JY16   A0A194QXF5   A0A194QK93   A0A212FJP0   I4DLJ4   A0A1I8Q8R6   A0A2J7QN30   A0A2J7QN19   A0A182G671   A0A182G7A7   A0A1W4UK69   B4KQL2   A0A139WEK6   T1PBL8   A0A1I8MY58   A0A2M4APQ5   B4HSN3   A0A0J9R8V6   A0A1A9WMU3   B4NNL7   A0A2M4APY0   W5JNI9   B4QGT0   Q17KH2   A0A1S4EZI1   B4P3Y3   B3MDH2   A0A0L0CFV4   Q961H2   B0X701   A0A2M4BLZ1   A0A2M3Z2I0   A0A3B0JLW6   A0A182TA87   A0A2M3Z2G2   B4ME54   B3N7K3   A0A0T6B6S1   A0A182MM54   A0A2M4BND9   A0A1W4UXN0   A0A182PGG7   B4NNL5   A0A1B0F9V5   A0A0J9R8S1   A0A1A9VPF0   A0A034VGW4   A0A336MM13   A0A182UEH6   A0A3F2YSU9   A0A0K8VG66   Q7Q7G7   B4QGT1   W8BDV4   A0A1D6ZLZ8   Q1EC10   U5ETZ8   A0A182RA17   A0A1Q3FGF0   A0A1Q3FGC4   A0A084W2H8   B3N7K2   A0A0A1XC01   Q28XW4   Q28XW3   B3MDH1   A0A1B6L822   A0A182JQA3   B4GH50   A0A0K8VIB6   A0A0M4E5K0   A0A0A1XF06   B4P3Y4   A0A182YFN8   A0A182V496   A0A336MM15   A0A182XD52   A0A182N879   B4J995   A0A336MDC3   A0A3B0J0K8   A0A182FCD8   A0A336KPD5   A0A034WHB4   A0A336L3L6   A0A1Y1L2R4   A0A1L8DEH4   A0A1L8DE79   A0A1L8DE75   A0A1L8DE68  

Pubmed

28756777    22118469    26354079    19121390    22651552    26483478    + More
17994087    18362917    19820115    25315136    22936249    20920257    23761445    17510324    17550304    26108605    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    25348373    12364791    14747013    17210077    24495485    24438588    25830018    15632085    25244985    28004739   

EMBL

KZ149917    PZC77915.1    AGBW02008244    OWR53966.1    ODYU01007151    SOQ49679.1    + More
NWSH01001023    PCG73050.1    RSAL01000235    RVE43765.1    KQ458575    KPJ05793.1    KQ461073    KPJ09641.1    BABH01041627    KPJ09640.1    KPJ05794.1    OWR53967.1    AK402162    BAM18784.1    NEVH01013201    PNF29986.1    PNF29985.1    JXUM01007622    JXUM01007623    KQ560244    KXJ83610.1    JXUM01008009    JXUM01008010    KQ560251    KXJ83555.1    CH933808    EDW08181.1    KQ971354    KYB26390.1    KA645505    AFP60134.1    GGFK01009429    MBW42750.1    CH480816    EDW47060.1    CM002911    KMY92466.1    CH964282    EDW85956.1    GGFK01009524    MBW42845.1    ADMH02000550    ETN65922.1    CM000362    EDX06305.1    CH477224    EAT47179.1    CM000157    EDW89466.1    CH902619    EDV36420.1    JRES01000440    KNC31125.1    AY051590    AE013599    AAK93014.1    AAM68813.1    DS232431    EDS41672.1    GGFJ01004822    MBW53963.1    GGFM01001978    MBW22729.1    OUUW01000001    SPP74236.1    GGFM01001956    MBW22707.1    CH940662    EDW58819.1    CH954177    EDV59408.1    LJIG01009453    KRT83049.1    AXCM01004465    GGFJ01005449    MBW54590.1    EDW85954.1    CCAG010014464    KMY92467.1    GAKP01017238    JAC41714.1    UFQS01001699    UFQT01001699    SSX11900.1    SSX31462.1    APCN01004443    GDHF01014395    GDHF01002448    JAI37919.1    JAI49866.1    AAAB01008960    EAA11797.4    EDX06306.1    GAMC01009658    JAB96897.1    KT722703    ANS71638.1    BT025924    AAM68814.2    ABG02168.1    GANO01001695    JAB58176.1    GFDL01008415    JAV26630.1    GFDL01008438    JAV26607.1    ATLV01019619    KE525275    KFB44422.1    EDV59407.2    GBXI01005820    JAD08472.1    CM000071    EAL26202.1    EAL26203.1    EDV36419.2    GEBQ01032241    GEBQ01020129    GEBQ01019758    GEBQ01003363    JAT07736.1    JAT19848.1    JAT20219.1    JAT36614.1    CH479183    EDW35820.1    GDHF01013670    JAI38644.1    CP012524    ALC41566.1    GBXI01004318    JAD09974.1    EDW89467.2    UFQS01001700    UFQT01001700    SSX11902.1    SSX31464.1    CH916367    EDW02470.1    UFQT01000972    SSX28236.1    SPP74235.1    UFQS01000553    UFQT01000553    SSX04853.1    SSX25216.1    GAKP01005407    JAC53545.1    SSX11901.1    SSX31463.1    GEZM01068241    JAV67068.1    GFDF01009324    JAV04760.1    GFDF01009322    JAV04762.1    GFDF01009323    JAV04761.1    GFDF01009321    JAV04763.1   

Proteomes

UP000007151    UP000218220    UP000283053    UP000053268    UP000053240    UP000005204    + More
UP000095300    UP000235965    UP000069940    UP000249989    UP000192221    UP000009192    UP000007266    UP000095301    UP000001292    UP000091820    UP000007798    UP000000673    UP000000304    UP000008820    UP000002282    UP000007801    UP000037069    UP000000803    UP000002320    UP000268350    UP000075901    UP000008792    UP000008711    UP000075883    UP000075885    UP000092444    UP000078200    UP000075902    UP000075840    UP000007062    UP000075900    UP000030765    UP000001819    UP000075881    UP000008744    UP000092553    UP000076408    UP000076407    UP000075884    UP000001070    UP000069272   

PRIDE

H9JY16    Q961H2    Q1EC10   

Pfam

PF07690   MFS_1        + More
PF03357   Snf7
PF01423   LSM

Interpro

IPR036259   MFS_trans_sf        + More
IPR020846   MFS_dom       
IPR011701   MFS       
IPR001958   Tet-R_TetA/multi-R_MdtG       
IPR005829   Sugar_transporter_CS       
IPR010920   LSM_dom_sf       
IPR001163   LSM_dom_euk/arc       
IPR005024   Snf7_fam       

SUPFAM

SSF103473   SSF103473        + More
SSF50182   SSF50182       

CDD

cd06174  MFS

ProteinModelPortal

A0A2W1BW92   A0A212FJR3   A0A2H1W9A6   A0A2A4JNQ2   A0A3S2NSY9   A0A194QJP3   + More
A0A194R1C0   H9JY16   A0A194QXF5   A0A194QK93   A0A212FJP0   I4DLJ4   A0A1I8Q8R6   A0A2J7QN30   A0A2J7QN19   A0A182G671   A0A182G7A7   A0A1W4UK69   B4KQL2   A0A139WEK6   T1PBL8   A0A1I8MY58   A0A2M4APQ5   B4HSN3   A0A0J9R8V6   A0A1A9WMU3   B4NNL7   A0A2M4APY0   W5JNI9   B4QGT0   Q17KH2   A0A1S4EZI1   B4P3Y3   B3MDH2   A0A0L0CFV4   Q961H2   B0X701   A0A2M4BLZ1   A0A2M3Z2I0   A0A3B0JLW6   A0A182TA87   A0A2M3Z2G2   B4ME54   B3N7K3   A0A0T6B6S1   A0A182MM54   A0A2M4BND9   A0A1W4UXN0   A0A182PGG7   B4NNL5   A0A1B0F9V5   A0A0J9R8S1   A0A1A9VPF0   A0A034VGW4   A0A336MM13   A0A182UEH6   A0A3F2YSU9   A0A0K8VG66   Q7Q7G7   B4QGT1   W8BDV4   A0A1D6ZLZ8   Q1EC10   U5ETZ8   A0A182RA17   A0A1Q3FGF0   A0A1Q3FGC4   A0A084W2H8   B3N7K2   A0A0A1XC01   Q28XW4   Q28XW3   B3MDH1   A0A1B6L822   A0A182JQA3   B4GH50   A0A0K8VIB6   A0A0M4E5K0   A0A0A1XF06   B4P3Y4   A0A182YFN8   A0A182V496   A0A336MM15   A0A182XD52   A0A182N879   B4J995   A0A336MDC3   A0A3B0J0K8   A0A182FCD8   A0A336KPD5   A0A034WHB4   A0A336L3L6   A0A1Y1L2R4   A0A1L8DEH4   A0A1L8DE79   A0A1L8DE75   A0A1L8DE68  

KEGG

101746174    K14613 MFS transporter, PCFT/HCP family, solute carrier family 46 (folate transporter), member 1 | (

GO

GO:0016021   GO:0055085   GO:0005215   GO:0009636   GO:0097254   GO:0007034   GO:0005515   GO:0006412   GO:0016020   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

Length:

479

Number of predicted TMHs:

11

Exp number of AAs in TMHs:

232.5549

Exp number, first 60 AAs:

20.39129

Total prob of N-in:

0.22982

POSSIBLE N-term signal

sequence

outside

1  -  31

TMhelix

32  -  54

inside

55  -  92

TMhelix

93  -  115

outside

116  -  124

TMhelix

125  -  144

inside

145  -  148

TMhelix

149  -  171

outside

172  -  190

TMhelix

191  -  213

inside

214  -  217

TMhelix

218  -  240

outside

241  -  280

TMhelix

281  -  303

inside

304  -  315

TMhelix

316  -  338

outside

339  -  352

TMhelix

353  -  375

inside

376  -  406

TMhelix

407  -  429

outside

430  -  438

TMhelix

439  -  461

inside

462  -  479

 

 

Pi

19.448582

Theta

181.828282

Tajima's D

0.784523

CLR

0.567506

CSRT

0.606369681515924

Interpretation

Uncertain