Gene

KWMTBOMO11555  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004078

Annotation

Mitochondrial_ribosomal_protein_S9_[Operophtera_brumata]

Location

Bomo_Chr19(+):7991775-7993121      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 1.658 Nuclear   Reliability : 1.979

CDS

ATGTCTCTTATAGGAATTAGGCAAATAATACCAGCAGCAACAAAATATTTTCGGTATCCACTAACAATAGGAACATTTCAGTACTGCACTAGAACTACGTCCGATCCCAGTAATGTTCTAAATGATCTAACAGATTGGGAGACACTGAACAAAAAGAAAAAGATAAGTAAGGCCATGAAAGCTTATTTAGAGAGAGCAAAAGAACATGACGAGTTTATGAAACGACAACAATTTGAATATAACATCGGAAAACGACATCTTGCGAATATGATGGGCGAAGATCCTGAATTGTTTACTCAAAAGGATGTAGAGCGCGCTATAGAATATCTATTCCCCAGCGGTATTTACGATCCTGCCGCACGACCATCGATGAGGCCACCAGAAGACGTCTTTCCCGCTCGCAAAGCCGCTGAATTCGACGAAGCTGGAAGACCTCACCATTGTTTGTTTTATACTGGAAAACCAAATTTCTTTAAACTACTTCATGACGCTGCCGACCATTTACAACAACTTTACAAATATGAAGACCAAGTTATTAGAAAGAAAGCAACTCCTGATCCAAATGGCAATTTACAACTCGGGGGTAGTATGTGGGTGAATAAAGATCAACTTGAGCAGTTGTTAGTTGAAAAGATTTCTGATTTAGAATATGACAATTTCAAAGTGGTCATGGAAAGATTAGTCTCACTGCCATATTCTTACAGATATAAAGATTTTATTGAAAAATTTAGGAAGCCCCTTGCTGTACAAAAGTTTGCTTTAGAAATTCCAAAACCTAATTATGACGAAGAGGGAAGAGCCTATATTACAACTTATGAGTGTTTAAGGAAAAAGGCTAGAGGGGATGTAACCATAAGATCACCAGGCACAGGCAAAATAACAATTAACAAAAAAGATATCACATATTTTGATGATGTTCAGTCGAGAGAACAAGTGTTGTTCCCGCTAATATTCACTGGTATGCAAAACCGTGTGGATGTGGAATGTAATGTAGAAGGTGGTGGACCTTCCGGCCAATCTGGAGCCATTAGATGGGGTATAGCTTGGGGCCTCCGTAGTTTTGTTGACAAAGATATGCTACAGCAAATGCAAGTGGCAGGACTATTAACTAGAGATCACAGGAGGCGTGAACGTAAGAAGCCTGGTCAACCTGGAGCAAGGAAGAAGCCAACATGGAAAAAACGCTAA

Protein

MSLIGIRQIIPAATKYFRYPLTIGTFQYCTRTTSDPSNVLNDLTDWETLNKKKKISKAMKAYLERAKEHDEFMKRQQFEYNIGKRHLANMMGEDPELFTQKDVERAIEYLFPSGIYDPAARPSMRPPEDVFPARKAAEFDEAGRPHHCLFYTGKPNFFKLLHDAADHLQQLYKYEDQVIRKKATPDPNGNLQLGGSMWVNKDQLEQLLVEKISDLEYDNFKVVMERLVSLPYSYRYKDFIEKFRKPLAVQKFALEIPKPNYDEEGRAYITTYECLRKKARGDVTIRSPGTGKITINKKDITYFDDVQSREQVLFPLIFTGMQNRVDVECNVEGGGPSGQSGAIRWGIAWGLRSFVDKDMLQQMQVAGLLTRDHRRRERKKPGQPGARKKPTWKKR

Uniprot

H9J3J1   A0A2W1BS60   A0A2H1VNS2   A0A0L7LVF4   A0A2A4JN99   A0A194QXG1   + More
A0A194QK86   A0A212FJQ8   A0A0K8VQU4   A0A1W4X719   A0A034VSF1   D3TM49   A0A336M2S3   W8BNL5   A0A1W7R7T9   A0A023ERE3   B4JI36   B4K7I7   B3LXF6   A0A1Q3F834   Q294L5   B4GMX8   A0A1Y1KFC8   B4M0V0   B4R0A8   A0A1W4VY30   B4N8C9   A0A0L0CKQ3   Q16Q53   Q8SXF0   B3NYS7   B4PRD6   A0A1I8QBZ6   A0A1I8MH69   T1PEU9   A0A0M4EPU5   A0A1L8DRH7   B0WT48   A0A034VRL8   J3JZ78   A0A1J1IE52   A0A2S2NCE8   C4WT82   A0A2H8TWJ8   A0A069DSP9   A0A023F479   A0A182QEP3   A0A1S4H4A7   A0A182KJW5   A0A224XSV3   A0A2Y9D0W8   A0A2Y9D3H0   A0A2M4ALX2   A0A195CVV0   A0A171BAJ0   A0A2S2R8F3   A0A0V0GBQ7   A0A1B6D3Y2   A0A0C9RHL7   A0A195E6C9   A0A1B6M7P8   A0A146LSR9   A0A1B6K5N3   A0A1B6ERV4   A0A2M4CJR4   E9H6Q8   A0A3Q0J7R6   A0A0P5BU25   A0A1S3DDA8   A0A0P5KDQ7   A0A0P5Q3Z3   A0A0P5QBP7   A0A0P5Q6A8   A0A0P5FYB7   A0A0P5N1Q8   A0A0P6JDQ4   A0A1E1X9A6   A0A224YZE4   A0A0P5RVZ6   A0A131YLI8   A0A0P5QVC8   A0A182GNJ0   A0A0P5RBJ6   A0A0P5S2Z6   G3MP64   L7M8E5   A0A293MUE2  

Pubmed

19121390    28756777    26227816    26354079    22118469    25348373    + More
20353571    24495485    24945155    17994087    15632085    28004739    26108605    17510324    10731132    12537568    12537572    12537573    12537574    16110336    17569856    17569867    26109357    26109356    17550304    25315136    22516182    26334808    25474469    12364791    20966253    26823975    21292972    28503490    28797301    26830274    26483478    22216098    25576852   

EMBL

BABH01021444    KZ149917    PZC77912.1    ODYU01003397    SOQ42102.1    JTDY01000011    + More
KOB79457.1    NWSH01001023    PCG73064.1    KQ461073    KPJ09645.1    KQ458575    KPJ05789.1    AGBW02008244    OWR53962.1    GDHF01011072    JAI41242.1    GAKP01014227    JAC44725.1    EZ422501    ADD18777.1    UFQS01000320    UFQT01000320    SSX02825.1    SSX23193.1    GAMC01011586    GAMC01011584    JAB94971.1    GEHC01000438    JAV47207.1    GAPW01001860    JAC11738.1    CH916369    EDV92917.1    CH933806    EDW15331.1    CH902617    EDV42800.1    GFDL01011311    JAV23734.1    CM000070    EAL28949.2    CH479185    EDW38202.1    GEZM01085169    JAV60159.1    CH940650    EDW68409.1    CM000364    EDX12033.1    CH964232    EDW81380.1    JRES01000266    KNC32817.1    CH477760    EAT36526.1    AE014297    AY089671    AAF54157.3    AAL90409.1    CH954181    EDV48190.1    CM000160    EDW96324.1    KA647219    AFP61848.1    CP012526    ALC47865.1    GFDF01005021    JAV09063.1    DS232080    EDS34191.1    GAKP01014220    JAC44732.1    BT128559    AEE63516.1    CVRI01000047    CRK98533.1    GGMR01002188    MBY14807.1    ABLF02032415    AK340503    BAH71102.1    GFXV01005733    MBW17538.1    GBGD01001934    JAC86955.1    GBBI01002893    JAC15819.1    AXCN02001867    AAAB01008980    GFTR01005377    JAW11049.1    APCN01005275    APCN01005276    GGFK01008475    MBW41796.1    KQ977220    KYN04806.1    GEMB01000064    JAS03045.1    GGMS01017000    MBY86203.1    GECL01000774    JAP05350.1    GEDC01016918    JAS20380.1    GBYB01012697    JAG82464.1    KQ979608    KYN20432.1    GEBQ01008022    JAT31955.1    GDHC01009189    JAQ09440.1    GECU01000947    JAT06760.1    GECZ01029107    JAS40662.1    GGFL01001422    MBW65600.1    GL732598    EFX72594.1    GDIP01179995    JAJ43407.1    GDIQ01192054    GDIP01132058    JAK59671.1    JAL71656.1    GDIQ01129480    JAL22246.1    GDIQ01122992    JAL28734.1    GDIQ01128237    JAL23489.1    GDIQ01249601    JAK02124.1    GDIQ01148636    JAL03090.1    GDIQ01008776    JAN85961.1    GFAC01003345    JAT95843.1    GFPF01011852    MAA22998.1    GDIQ01113433    JAL38293.1    GEDV01008394    JAP80163.1    GDIQ01115945    JAL35781.1    JXUM01076350    JXUM01076351    KQ562940    KXJ74774.1    GDIQ01112090    JAL39636.1    GDIQ01110343    JAL41383.1    JO843665    AEO35282.1    GACK01004719    JAA60315.1    GFWV01019398    MAA44126.1   

Proteomes

UP000005204    UP000037510    UP000218220    UP000053240    UP000053268    UP000007151    + More
UP000192223    UP000001070    UP000009192    UP000007801    UP000001819    UP000008744    UP000008792    UP000000304    UP000192221    UP000007798    UP000037069    UP000008820    UP000000803    UP000008711    UP000002282    UP000095300    UP000095301    UP000092553    UP000002320    UP000183832    UP000007819    UP000075886    UP000075882    UP000075840    UP000076407    UP000078542    UP000078492    UP000000305    UP000079169    UP000069940    UP000249989   

PRIDE

H9J3J1    Q8SXF0   

Pfam

PF00380   Ribosomal_S9

Interpro

IPR020568   Ribosomal_S5_D2-typ_fold        + More
IPR000754   Ribosomal_S9       
IPR014721   Ribosomal_S5_D2-typ_fold_subgr       

SUPFAM

SSF54211   SSF54211       

Gene 3D

3.30.230.10    

ProteinModelPortal

H9J3J1   A0A2W1BS60   A0A2H1VNS2   A0A0L7LVF4   A0A2A4JN99   A0A194QXG1   + More
A0A194QK86   A0A212FJQ8   A0A0K8VQU4   A0A1W4X719   A0A034VSF1   D3TM49   A0A336M2S3   W8BNL5   A0A1W7R7T9   A0A023ERE3   B4JI36   B4K7I7   B3LXF6   A0A1Q3F834   Q294L5   B4GMX8   A0A1Y1KFC8   B4M0V0   B4R0A8   A0A1W4VY30   B4N8C9   A0A0L0CKQ3   Q16Q53   Q8SXF0   B3NYS7   B4PRD6   A0A1I8QBZ6   A0A1I8MH69   T1PEU9   A0A0M4EPU5   A0A1L8DRH7   B0WT48   A0A034VRL8   J3JZ78   A0A1J1IE52   A0A2S2NCE8   C4WT82   A0A2H8TWJ8   A0A069DSP9   A0A023F479   A0A182QEP3   A0A1S4H4A7   A0A182KJW5   A0A224XSV3   A0A2Y9D0W8   A0A2Y9D3H0   A0A2M4ALX2   A0A195CVV0   A0A171BAJ0   A0A2S2R8F3   A0A0V0GBQ7   A0A1B6D3Y2   A0A0C9RHL7   A0A195E6C9   A0A1B6M7P8   A0A146LSR9   A0A1B6K5N3   A0A1B6ERV4   A0A2M4CJR4   E9H6Q8   A0A3Q0J7R6   A0A0P5BU25   A0A1S3DDA8   A0A0P5KDQ7   A0A0P5Q3Z3   A0A0P5QBP7   A0A0P5Q6A8   A0A0P5FYB7   A0A0P5N1Q8   A0A0P6JDQ4   A0A1E1X9A6   A0A224YZE4   A0A0P5RVZ6   A0A131YLI8   A0A0P5QVC8   A0A182GNJ0   A0A0P5RBJ6   A0A0P5S2Z6   G3MP64   L7M8E5   A0A293MUE2  

PDB

6NF8     E-value=4.54546e-79,     Score=750

KEGG

101745649    K02996 small subunit ribosomal protein S9 | (RefSeq) 28S ribosomal protein S9, mitochondrial

PATHWAY

03010    Ribosome - Bombyx mori (domestic silkworm)

GO

GO:0005840   GO:0006412   GO:0003735   GO:0005763   GO:0005739   GO:0032543   GO:0003723   GO:0000462   GO:0016020   GO:0016021   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

PANTHER

PTHR21569  

Length:

395

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00265

Exp number, first 60 AAs:

0.00134

Total prob of N-in:

0.01325

outside

1  -  395

 

 

Pi

271.515283

Theta

222.449521

Tajima's D

0.694558

CLR

0

CSRT

0.571221438928054

Interpretation

Uncertain