Gene

KWMTBOMO11551

Pre Gene Modal

BGIBMGA004075

Annotation

PREDICTED:_holotricin-3_[Bombyx_mori]

Location

Bomo_Chr19(+):7962045-7963945 View in EpiBrowser

Location in the cell

Extracellular Reliability : 1.573 Mitochondrial Reliability : 1.122 Nuclear Reliability : 1.182

Sequence

CDS

ATGAACATTTTCTACTATATCACTGTTTTGATCTGTGCGTGCCTCGCATATGTCTCCGCTCTCCCTTCGGCCATCGCGGGAGCTGAAGACCTCCAACCCGCCGAGTCTCGTTGGAATCATGGCGGTGGACACCACGGCGGTGGACACCACGGCGGCGGTCACCACGGTGGTGGTCACTACGGCGGTGGTCATCATGGTGGCCATGGAGGCTACAAGGGTGGTTATGGACACGGACGCTAA

Protein

MNIFYYITVLICACLAYVSALPSAIAGAEDLQPAESRWNHGGGHHGGGHHGGGHHGGGHYGGGHHGGHGGYKGGYGHGR

Summary

Uniprot

ProteinModelPortal

Ontologies

KEGG

101745172 no KO assigned | (RefSeq) CPG36, bmSIGRP; holotricin-3

Topology

SignalP

Position: 1 - 20, Likelihood: 0.990928

Length:

Number of predicted TMHs:

Exp number of AAs in TMHs:

21.55326

Exp number, first 60 AAs:

21.5515

Total prob of N-in:

0.77563

POSSIBLE N-term signal

sequence

inside

1 - 4

TMhelix

5 - 27

outside

28 - 79

Population Genetic Test Statistics

284.73361

Theta

227.07191

Tajima's D

0.795781

CLR

0.372445

CSRT

0.604769761511924

Interpretation

Uncertain