SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11549
Annotation
hypothetical_protein_RR48_13287_[Papilio_machaon]
Location in the cell
Cytoplasmic   Reliability : 1.074 Extracellular   Reliability : 1.274
 

Sequence

CDS
ATGGACCTTACAAAATTTCTGATTATTACCATTACCCTAGCAATAATCCTGACCACTTGCGATGGTTTCATCCAAAACTGGTTACCAAGCTTTTTTGGGTCAAAAAAGGGAAGACGCAGTTTATCCGAAGTTATAACCAATTACCTGGACGAGGTGTTCCCTAAAGACGATAAAGAATCTAGAACTATGAAGCAGATTTTCATGATGCTGTCGGATGATGGAAACAAAGATATGGAAACTCAACTTGAAGGCATAGAGTTTTTGTTAGAATAG
Protein
MDLTKFLIITITLAIILTTCDGFIQNWLPSFFGSKKGRRSLSEVITNYLDEVFPKDDKESRTMKQIFMMLSDDGNKDMETQLEGIEFLLE

Summary

Ontologies

GO

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.855260
 
 
Length:
90
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.41917
Exp number, first 60 AAs:
21.41917
Total prob of N-in:
0.80782
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  90
 
 

Population Genetic Test Statistics

Pi
63.673053
Theta
137.976405
Tajima's D
0.064297
CLR
0.080799
CSRT
0.382830858457077
Interpretation
Uncertain
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