SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11548
Annotation
putative_cuticle_protein_CPG35_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 1.602 Nuclear   Reliability : 1.106
 

Sequence

CDS
ATGGCAATTAACAAAAGCATCCTGGTTTTTGTCGTTTTGGCGATTACATTGGCGCTAGTCTCTGGCCAGTTTGGAGGACCAGGTGGTTATGGTGGATTCGGCGGTGGCAGACCTGGTTTTGGTGGGGGATTCGGCGGTAGAGGACCTGGCTTCGGTGGAGGATTCGGTCAAGGCTTCGGCGGCTATGGACCTAGAGGATTCGGAAATGGAGGATACGGAGGATTTGGTCGATTCGGAGGCGGCTTCGGACCGGGCTTTGGAGGATACGGACGCTAA
Protein
MAINKSILVFVVLAITLALVSGQFGGPGGYGGFGGGRPGFGGGFGGRGPGFGGGFGQGFGGYGPRGFGNGGYGGFGRFGGGFGPGFGGYGR

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 22,         Likelihood:  0.997263
 
 
Length:
91
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
28.9729
Exp number, first 60 AAs:
21.7726
Total prob of N-in:
0.99836
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  26
outside
27  -  91
 
 

Population Genetic Test Statistics

Pi
171.599307
Theta
172.07029
Tajima's D
-0.021812
CLR
23.775624
CSRT
0.36343182840858
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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