SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11547
Annotation
NA
Location in the cell
Extracellular   Reliability : 1.77 Nuclear   Reliability : 1.24
 

Sequence

CDS
ATGATGGCATCAAAGATTTTGTTTATCTGCGCTCTTGTGCTAGCTGCCATGATTAGCACAACCATAGCTCAAGGAGGCTTCGGCAGTAGCAAGGGTGGATTTGATAGACGGGGTGGGCGTGGGCAGGGTGGTTTCGATGGTCGAGGTGGTTTCGGCGGTCAGAGCGGGCGTGGCCAGGGTGGATTTGGTGGACAGGGTGGGCGTGGCCAGGGTGGTTTCGGTGGTCAGGGCGGGCGTGACCAGGGTGGTTTTGGCGGTCAAGGAGGATTCGGTGGCAACCAAGGTGGTTTTGGTGGTCAAAGAGGATTCGGTGGCAACCAAGGTGGTTTTGGTGGTCAAAGAGGATTTGGTAGCAACCAAGGAGGTTTTGGTAGACAAGGTGGCTTCGGTAGGAATTAA
Protein
MMASKILFICALVLAAMISTTIAQGGFGSSKGGFDRRGGRGQGGFDGRGGFGGQSGRGQGGFGGQGGRGQGGFGGQGGRDQGGFGGQGGFGGNQGGFGGQRGFGGNQGGFGGQRGFGSNQGGFGRQGGFGRN

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

SignalP
Position:   1 - 23,         Likelihood:  0.993385
 
 
Length:
132
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
21.52107
Exp number, first 60 AAs:
21.51851
Total prob of N-in:
0.95340
POSSIBLE N-term signal
sequence
inside
1  -  6
TMhelix
7  -  29
outside
30  -  132
 
 

Population Genetic Test Statistics

Pi
275.855895
Theta
244.404597
Tajima's D
0.405349
CLR
0
CSRT
0.488875556222189
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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