Gene

KWMTBOMO11542

Annotation

endonuclease-reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr19(+):7901845-7904369      View in EpiBrowser

Full name

Sodium/hydrogen exchanger      

Location in the cell

Nuclear   Reliability : 2.43

CDS

ATGATTGCACACCGCAGAACCAGGCCCCTAGTCCCCGGCGGCCCCGCTATTCCTGGTTACGGTAGCGGCCATGGTAACGGCGGGGCAAGGGGTGCTAAGAATCCCCGGCAGAGATCCGGCTACCACCCCCCTTCACAACGACAACTGGCCCTGGTGACATACAACGTGCGCACTTTGAGGTTGGACGAGAAGCTAATAGAGCTGGAAGAAGAAATGAACAAGTTGCGCTGGGACGTTATTGGTTTATCGGAGATCCGAAGAGAGGGGGAGGATACGAAAACCTTACAGTCCGGCCACTTGTTCTACTACCGGGAGGGAGAACAGAAGTCCCAAGGTGGTGTTGGGTTTATCGTCCACAAATCTCTCATAAACAACATTGTGGCCATCGAAAGTGTGTCGAGTAGGGTAGTATACCTTGTCCTCAAAATCACAAAGCGGTATTCGCTGAAGATTGTACAGGTATACGCCCCATCGACGTCACATCCAGACGATGAAGTGGAAGCTACGTATGAGGACATTAGTAGGGCCATACGTAGCTCCCAATCACATTTTACCGTTGTTATGGGAGATTTCAATGCAAAACTGGGCCGTAGAGGCGATGATGAGTTGAAAGTGGGGCCATTTGGATTTGGGCAGCGGAATCCCAGAGGACAGATGCTGGCGGACTTTATGGAGAAGGAAGGACTCTTTATGATGAATTCTTTCTTCAAGAAGCCGCCACAACGGAAATGGACCTGGTTGAGTCCCGACGGTGTAACAAGAAATGAAATTGACTTCATCATGAGCACCAACAGACAGATATTCAACGATGTCTCTGTGATCAACAGTGTTAAAACAGGAAGTGATCACCGAATCGTCAGAGGCATGTTGAATATCAATGTCAGACTGGAAAGATCGCGTCTGATGAAGTCAACGCTTCGACCGTCGAATGCACAAATCCAAAACCCCGAGAGCTTTCAACTCGAATTGGCTAATCGCTTCGAATGGCTAAACAGCTGCGCATCAGTGGACGATGTAAACAGCAGGCTGGTAGAGACTGTCCGTACGGTAGGGTCGAAATTTTTCAAAACCCACCATACGAATAGACCTCAGAAACTATCCGACCGCACCCGAAACCTCATGGCTAGTCGACGTTTGATGACGCTGCAAACTTCGGAGGACGCTGAGTCATATAGGCAACTCAATAGACATATCATGAAGTCCTTGCGACACGACCTACGCTCCTTTAATACTCAGCGTATCAAAGAGACGATTGAGCGAAACCAAGGCTCTAAAGTGTTCGCAAGAGACGCTTCTATTGGGCAAAGCCAGCTGACGAAGCTGAAGACCGAAGATGGACGTGTAACGTCGAATAAGTCAGAGGTCCTACGGGAGATAGAGAGGTTCTACGGGCAGCTGTTTACCTCGGTCTCAGCTGAACCACAAGGTTTAGCTGCAGACCCTAGAGCCAAGCTAACCCGACACTACACCGAAGACATCCCGGACATCAGCCTGTACGAGATTAGGATGGCTCTCAAACAGCTTAAGAATAACAAGGCACCGGGCGAGGATGGAATTACTACGGAGCTTCTGAAAGCAGGCGGGACGCCGGTACTGAAAGTCCTTCAGAAGCTCTTCAATTCCTCTTTGCTCGATGGAAAACCGCCACAGGCATGGAACAGGGGTGTTGTGATCCTGTTCTTCAAAAAAGGTGACAAAACCTTATTGAAGAACTATAGGCCCATAGCACTGCTGAGCCATGTCTACAAGCTGTTCTCGAGAGTCATCACGAATCGTCTCGAACGCAGGTTTGATGACTTCCAGCCTACCGAACAAGCCGGTTTCCGAAAAGGCTACAGTACCATAGACCACATACATACGCTGCGGCAGATTGTACAGAAGACCGAAGAGTACAATCGGCCATTATGCTTAGCGTTTGTGGACTATGAGAAAGCCTTTGATTCCGTCGAAACATGGGCGGTCCTTAGATCTCTCCAGCGGTGCCGTATTGACCACCGGTACATCGAAGTATTGAAGTGTTTGTATAATAACGCCACCATGTCAGTCCGAGTACAGGAGCATTGCACGAAGGAAATCCCTGTAAAGAGAGGAGTGAGACAGGGAGATGTGATATCTCCGAAACTGTTTATCACTGCTCTGGAGGATTCCTTCAAGCTTCTGGAATGGCAAGGACTTGGCATCAATATTAACGGCGAATACATCACTCATCTTCGGTTTGCCGATGACATCGTGGTCATGGCAGAGTCGCTGGAAGATTTAGGGCGTATGCTCGGTGACCTCAGTAGGGTTTCTCAACAACTCTACTCTTGA

Protein

MIAHRRTRPLVPGGPAIPGYGSGHGNGGARGAKNPRQRSGYHPPSQRQLALVTYNVRTLRLDEKLIELEEEMNKLRWDVIGLSEIRREGEDTKTLQSGHLFYYREGEQKSQGGVGFIVHKSLINNIVAIESVSSRVVYLVLKITKRYSLKIVQVYAPSTSHPDDEVEATYEDISRAIRSSQSHFTVVMGDFNAKLGRRGDDELKVGPFGFGQRNPRGQMLADFMEKEGLFMMNSFFKKPPQRKWTWLSPDGVTRNEIDFIMSTNRQIFNDVSVINSVKTGSDHRIVRGMLNINVRLERSRLMKSTLRPSNAQIQNPESFQLELANRFEWLNSCASVDDVNSRLVETVRTVGSKFFKTHHTNRPQKLSDRTRNLMASRRLMTLQTSEDAESYRQLNRHIMKSLRHDLRSFNTQRIKETIERNQGSKVFARDASIGQSQLTKLKTEDGRVTSNKSEVLREIERFYGQLFTSVSAEPQGLAADPRAKLTRHYTEDIPDISLYEIRMALKQLKNNKAPGEDGITTELLKAGGTPVLKVLQKLFNSSLLDGKPPQAWNRGVVILFFKKGDKTLLKNYRPIALLSHVYKLFSRVITNRLERRFDDFQPTEQAGFRKGYSTIDHIHTLRQIVQKTEEYNRPLCLAFVDYEKAFDSVETWAVLRSLQRCRIDHRYIEVLKCLYNNATMSVRVQEHCTKEIPVKRGVRQGDVISPKLFITALEDSFKLLEWQGLGININGEYITHLRFADDIVVMAESLEDLGRMLGDLSRVSQQLYS

Similarity

Belongs to the monovalent cation:proton antiporter 1 (CPA1) transporter (TC 2.A.36) family.

Feature

chain  Sodium/hydrogen exchanger

Uniprot

D7F158   D7F159   D7F164   D7F157   A0A3S2N805   D7F165   + More
D7F160   D7F166   A0A2H1VS24   A0A2W1BZV1   A0A1S3HCU5   A0A0N5C0B1   A0A0K0FAW8   A0A023EWU8   A0A0P4VWD0   E3NV79   A0A016V4Q8   E3MH09   D7F177   A0A016TK11   A0A016SG46   K7HC62   K7HC63   D7F176   E3NC15   A0A016W4R1   K7IG35   K7IBZ6   K7IBZ5   D7F179   K7HC61   A0A2R2MNC1   A0A2H2J8I4   A0A016V9Q8   K7I2A3   A0A2H1WF27   A0A016V6A2   E3NJQ7   K7ICT2   K7ICT1   K7IG36   K7H0Q9   A0A016S1D2   K7H0R0   A0A016WCB8   A0A016WPY4   A0A2H2JFN0   K7HDM3   K7HDM2   A0A016ULU9   K7I2A2   K7I2A1   Q9TZX4   K7H0Q8   A0A016SPR9   A0A016V419   A0A016TIG5   A0A016WFS9   A0A016WUN2   A0A016U352   A0A016U3L3   A0A016SVA2   A0A016TQJ1   A0A016W1X2   A0A016U6B7   A0A016WYN9   A0A016UA47   A0A016SCL7   A0A016VLP0   A0A016T4C4   A0A016SW37   A0A016WRX9   A0A016UY78   A0A016X207   A0A016V007   A0A016SY13   A0A016U123   A0A016SCZ8   A0A016VT25   A0A023EXV2   A0A016UJS4   A0A016WW86   A0A016TX70   A0A016T9D3   A0A016SXL6   A0A016S7F6   A0A016WPX9   W6NF02   A0A016T9A5   A0A016WE57   A0A016SQY7  

Pubmed

20470440    28756777    25474469    27129103    25730766    8603714    + More
9729877   

EMBL

FJ265543    ADI61811.1    FJ265544    ADI61812.1    FJ265549    ADI61817.1    + More
FJ265542    ADI61810.1    RSAL01001818    RVE40675.1    FJ265550    ADI61818.1    FJ265545    ADI61813.1    FJ265551    ADI61819.1    ODYU01004088    SOQ43598.1    KZ149907    PZC78256.1    GBBI01004877    JAC13835.1    GDKW01001596    JAI54999.1    DS270843    EFO97547.1    JARK01001354    EYC21713.1    DS268444    EFP01729.1    FJ265562    ADI61830.1    JARK01001676    JARK01001446    JARK01001433    EYB83199.1    EYC01126.1    EYC02928.1    JARK01001565    EYB89683.1    FJ265561    ADI61829.1    DS268591    EFO92565.1    JARK01001337    EYC34625.1    FJ265564    ADI61832.1    JARK01001351    EYC23458.1    ODYU01008249    SOQ51673.1    JARK01001353    EYC22263.1    DS268752    EFP01106.1    JARK01001655    EYB84321.1    JARK01000388    EYC37469.1    JARK01000173    EYC41342.1    JARK01001370    EYC16150.1    AF054983    AAC72298.1    JARK01001531    EYB92324.1    EYC21986.1    JARK01001435    EYC02496.1    JARK01000302    EYC38674.1    JARK01000109    EYC42952.1    JARK01001395    EYC09729.1    EYC09730.1    JARK01001505    EYB94618.1    JARK01001421    EYC04912.1    JARK01001338    EYC33297.1    JARK01001389    EYC10874.1    JARK01000063    EYC44387.1    JARK01001384    EYC12189.1    JARK01001628    JARK01001583    JARK01001528    JARK01001506    JARK01001470    JARK01001467    JARK01001463    JARK01001457    JARK01001432    JARK01001420    JARK01001403    JARK01001371    JARK01001369    JARK01001360    JARK01001349    JARK01000603    JARK01000080    EYB85741.1    EYB88438.1    EYB92544.1    EYB94540.1    EYB98080.1    EYB98468.1    EYB98899.1    EYB99568.1    EYC03088.1    EYC05014.1    EYC08153.1    EYC15852.1    EYC16408.1    EYC19456.1    EYC22445.1    EYC24734.1    EYC24778.1    EYC24866.1    EYC33488.1    EYC35672.1    EYC43798.1    JARK01001344    EYC28216.1    JARK01001475    EYB97550.1    EYB94617.1    JARK01000132    EYC42415.1    JARK01001359    EYC20105.1    JARK01000008    EYC46079.1    JARK01001357    EYC20551.1    JARK01001497    EYB95322.1    JARK01001401    EYC08686.1    JARK01001581    EYB88505.1    JARK01001340    EYC30744.1    GBBI01004876    JAC13836.1    JARK01001372    EYC15614.1    JARK01000078    EYC43871.1    JARK01001407    EYC07212.1    JARK01001459    EYB99276.1    JARK01001500    EYB95049.1    JARK01001612    EYB86585.1    JARK01000161    EYC41641.1    CAVP010059514    CDL95876.1    EYB99275.1    JARK01000343    EYC38099.1    JARK01001524    EYB92970.1   

Proteomes

UP000283053    UP000085678    UP000046392    UP000035680    UP000008281    UP000024635    + More
UP000005237    UP000025227   

PRIDE

D7F158    D7F159    D7F164    D7F157    D7F165    D7F160    + More
D7F166    D7F177    D7F176    D7F179   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF03372   Exo_endo_phos
PF00069   Pkinase
PF00201   UDPGT
PF05047   L51_S25_CI-B8
PF10328   7TM_GPCR_Srx
PF00999   Na_H_Exchanger

Interpro

IPR005135   Endo/exonuclease/phosphatase        + More
IPR036691   Endo/exonu/phosph_ase_sf       
IPR000477   RT_dom       
IPR016186   C-type_lectin-like/link_sf       
IPR016187   CTDL_fold       
IPR017441   Protein_kinase_ATP_BS       
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
IPR002213   UDP_glucos_trans       
IPR001507   ZP_dom       
IPR007741   Ribosome/NADH_DH       
IPR036249   Thioredoxin-like_sf       
IPR019430   7TM_GPCR_serpentine_rcpt_Srx       
IPR017452   GPCR_Rhodpsn_7TM       
IPR018422   Cation/H_exchanger_CPA1       
IPR006153   Cation/H_exchanger       
IPR004709   NaH_exchanger       

SUPFAM

SSF56219   SSF56219        + More
SSF56436   SSF56436       
SSF56112   SSF56112       
SSF52833   SSF52833       

Gene 3D

3.60.10.10     3.10.100.10    

ProteinModelPortal

D7F158   D7F159   D7F164   D7F157   A0A3S2N805   D7F165   + More
D7F160   D7F166   A0A2H1VS24   A0A2W1BZV1   A0A1S3HCU5   A0A0N5C0B1   A0A0K0FAW8   A0A023EWU8   A0A0P4VWD0   E3NV79   A0A016V4Q8   E3MH09   D7F177   A0A016TK11   A0A016SG46   K7HC62   K7HC63   D7F176   E3NC15   A0A016W4R1   K7IG35   K7IBZ6   K7IBZ5   D7F179   K7HC61   A0A2R2MNC1   A0A2H2J8I4   A0A016V9Q8   K7I2A3   A0A2H1WF27   A0A016V6A2   E3NJQ7   K7ICT2   K7ICT1   K7IG36   K7H0Q9   A0A016S1D2   K7H0R0   A0A016WCB8   A0A016WPY4   A0A2H2JFN0   K7HDM3   K7HDM2   A0A016ULU9   K7I2A2   K7I2A1   Q9TZX4   K7H0Q8   A0A016SPR9   A0A016V419   A0A016TIG5   A0A016WFS9   A0A016WUN2   A0A016U352   A0A016U3L3   A0A016SVA2   A0A016TQJ1   A0A016W1X2   A0A016U6B7   A0A016WYN9   A0A016UA47   A0A016SCL7   A0A016VLP0   A0A016T4C4   A0A016SW37   A0A016WRX9   A0A016UY78   A0A016X207   A0A016V007   A0A016SY13   A0A016U123   A0A016SCZ8   A0A016VT25   A0A023EXV2   A0A016UJS4   A0A016WW86   A0A016TX70   A0A016T9D3   A0A016SXL6   A0A016S7F6   A0A016WPX9   W6NF02   A0A016T9A5   A0A016WE57   A0A016SQY7  

PDB

6AR3     E-value=4.57337e-05,     Score=115

KEGG

105841685    no KO assigned | (RefSeq) uncharacterized LOC105841685

GO

GO:0004519   GO:0003964   GO:0004672   GO:0005524   GO:0016758   GO:0016021   GO:0006885   GO:0015385  

PANTHER

PTHR10110  

Length:

769

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0327300000000001

Exp number, first 60 AAs:

0.00223

Total prob of N-in:

0.00172

outside

1  -  769

 

 

Pi

39.127735

Theta

30.384448

Tajima's D

-1.099704

CLR

282.244952

CSRT

0.117694115294235

Interpretation

Uncertain