SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11540  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004041
Annotation
chemosensory_protein_7_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 3.101
 

Sequence

CDS
ATGAAGGGTTTCTACGTGCTGTGTTTTGCACTGTTCGCTGCTGTCTACTGTAAAGAGACATACAGCTCGGAAAATGACGATCTGGATATTGAAGCTTTGGTGGGAAATATTGATTCTCTGAAGGCCTTTATTGGATGCTTCTTAGAAACATCCCCTTGCGACGCTGTTTCCGGGGATTTCAAAAAGGACATTCCTGAAGCTGTGGCAGAAGCATGTGGCAAATGTACTCCAGCCCAGAAACATCTATTCAAACGTTTCCTTGAAGTCGTCAAGGACAAGCTACCTCAAGAATACGAAGCCTTCAAAACTAAATACGATCCCCAAGGAAAGCATTTCGATGCTCTGTTATCCGCCAAATATTACGATTCGCGGTACGATTATTATGATATCGATCATTTGGTACAGAACCCGAGGCTATTGAAAAAATATTTGGATTGTTTTTTGGGTAAAGGACCTTGTACGCCTATAGGAAGACTGTTTAAACAAGTCATGCCTGAAGTGATTACTACAGCCTGCGCCAAATGTACTCCGACGCAAAAGCGATTCGCCAGGAAGACGTTTAATGCTTTTAGAAGATACTTCCCTGAGACGCTCATGGAGCTCAGAAGAAAATTTGATCCTGAAAGCAAATATTATGACGCCTTTGAAAAAGTAATCACTAACGCATGA
Protein
MKGFYVLCFALFAAVYCKETYSSENDDLDIEALVGNIDSLKAFIGCFLETSPCDAVSGDFKKDIPEAVAEACGKCTPAQKHLFKRFLEVVKDKLPQEYEAFKTKYDPQGKHFDALLSAKYYDSRYDYYDIDHLVQNPRLLKKYLDCFLGKGPCTPIGRLFKQVMPEVITTACAKCTPTQKRFARKTFNAFRRYFPETLMELRRKFDPESKYYDAFEKVITNA

Summary

Pfam
PF03392   OS-D
Interpro
IPR005055   A10/PebIII        + More
IPR036682   OS_D_A10/PebIII_sf       
SUPFAM
SSF100910   SSF100910       
Gene 3D
PDB
2JNT     E-value=1.88749e-11,     Score=164

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.996707
 
 
Length:
222
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01923
Exp number, first 60 AAs:
0.01904
Total prob of N-in:
0.02787
outside
1  -  222
 
 

Population Genetic Test Statistics

Pi
50.13932
Theta
172.595209
Tajima's D
-1.067817
CLR
14.432292
CSRT
0.126093695315234
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26822097 FIEVVK 95.24 3e-08
25860555 IYDEEYRPK 95.24 3e-08
26280517 SEVITNVVNK 95.24 3e-08
25044914 AFIGCFIETSPCDAVSGDFK 95.24 3e-08
24402669 AFIGCFIETSPCDAVSGDFK 95.24 3e-08
28467696 AFIGCFIETSPCDAVSGDFK 95.24 3e-08
29197581 AFIGCFIETSPCDAVSGDFK 95.24 3e-08
24402669 KDIGMSNTSK 100.00 0.019
29197581 IPQEYEAFK 100.00 0.019
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