SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11531  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004066
Annotation
chemosensory_protein_3_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.143
 

Sequence

CDS
ATGAATTCCCTCATCGCATTCTGCCTGTTTGCCGTTTTGGCCGTGGCTCTCGCCAGACCTGACGACAAGTACACCGATCGCTACGACAACGTTAATTTAGATGAGGTCCTCAGCAATTCTCGACTTCTTCAGCCTTACATCAAATGTATCCTCGACAAGGACAGGTGTGCCCCTGACGCTAAGGAGTTGAAGGAACACATCAGGGAGGCACTCGAGACCGAATGCGCGAAATGTACCGAAGCCCAGAAGAAGGGTACTCGACGTGTTATCGGCCATCTAATTAATAACGAAAGCAAATCCTGGAATGAGCTGACCGCTAAATACGACCCCGAAAATAAATTTACAGCCAAATACGAAAAGGAGCTTCGCTACATTAACTGTATTCTCGAGCGAGGAAACTGCACTCGTGCCGGAAAAGACCTTAAATCTAGTTTAAAAAACGTATTAGAAGAAAACTGTGACAAATGCAGCGAAGACCAACGGAAGAGTATCATCAAAGTCATTAATTATTTGGTGAGCAGCGAACCGGAAAGCTGGAACCAACTCAAATCGAAGTACGACCCTGAAGGGAAATATTTAATCAAGTACGAAGCTAAAATGGAATCTAACTAA
Protein
MNSLIAFCLFAVLAVALARPDDKYTDRYDNVNLDEVLSNSRLLQPYIKCILDKDRCAPDAKELKEHIREALETECAKCTEAQKKGTRRVIGHLINNESKSWNELTAKYDPENKFTAKYEKELRYINCILERGNCTRAGKDLKSSLKNVLEENCDKCSEDQRKSIIKVINYLVSSEPESWNQLKSKYDPEGKYLIKYEAKMESN

Summary

Pfam
PF03392   OS-D
Interpro
IPR005055   A10/PebIII        + More
IPR036682   OS_D_A10/PebIII_sf       
SUPFAM
SSF100910   SSF100910       
Gene 3D
PDB
1N8V     E-value=6.96329e-26,     Score=287

Ontologies

Topology

SignalP
Position:   1 - 18,         Likelihood:  0.998084
 
 
Length:
203
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.70572
Exp number, first 60 AAs:
0.70572
Total prob of N-in:
0.03496
outside
1  -  203
 
 

Population Genetic Test Statistics

Pi
152.547583
Theta
143.81815
Tajima's D
0.254904
CLR
0.398621
CSRT
0.445777711114444
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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