SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11530
Pre Gene Modal
BGIBMGA004065
Annotation
chemosensory_protein_5_precursor_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 2.207
 

Sequence

CDS
ATGAAGACCGTTATTGTTTGCCTGCTTGCCTTGACGGCTGTGGCCCTCGCTCGCCCTGAACAGTACACAGACAAATACGACACTGTCGATCTGGACCAGCTCATATCTAACCGTCGGCTCCTCATTCCCTACGTACATTGCATCCTCGAAAAGGGCCAATGTACCGCAGAAGGCAAGGAACTTAAATCTCACATCAAGGAAGCTCTCGAGACCAACTGTGCTAAATGCACCAAAGCGCAAAAGGGTGGAACCGAAAAGATGATTGGTCACCTCATCAACCACGAAGCCGAGTTCTGGGAGGAGCTGAAGGCCAAATACGACCCCACCAACGAGTTCACAAAGAAATATGAAACTGAACTCAAACGCGTTACAGCTTAA
Protein
MKTVIVCLLALTAVALARPEQYTDKYDTVDLDQLISNRRLLIPYVHCILEKGQCTAEGKELKSHIKEALETNCAKCTKAQKGGTEKMIGHLINHEAEFWEELKAKYDPTNEFTKKYETELKRVTA

Summary

EMBL
BABH01021423    DQ855511    AB243747    AJ973403    ABH88198.1    BAF34352.1    + More
CAJ01450.1    NWSH01002886    PCG67367.1    EZ407231    ACX53788.1    MG546591    AYD42214.1    KC305880    AGH20056.1    GCVX01000009    JAI18221.1    KY815026    ASA40087.1    KZ149917    PZC77863.1    KX655951    AOG12900.1    GENK01000037    JAV45876.1    KQ461073    KPJ09676.1    KC907742    AGY49255.1    AB260119    BAF91714.1    AB430771    BAG71914.1    KX585417    ARO70310.1    KM365199    AIX97834.1    KT357395    AND82443.1    AGBW02008742    OWR52662.1    JX305304    AFR92093.1    HQ874664    AEX07269.1    PZC77867.1    LC027708    BAV56811.1    EF186792    ABM67687.1    GENK01000034    JAV45879.1    ODYU01007127    SOQ49627.1    KF487634    AII01032.1    AB430772    BAG71915.1    EF186793    ABM67688.1    NWSH01000827    PCG73982.1    KC579437    AHC05675.1    AF255919    AAF71290.2    KY130481    APG32549.1    KPJ09677.1    KT282976    KT991364    ALS03833.1    ANA75030.1    JX863698    AGR39573.1    KT261676    ALJ30216.1    KF487619    AII01017.1    FJ361903    ACJ04672.1    PCG73981.1    KT282989    ALS03846.1    MG788196    AXF48714.1    KC907754    AGY49267.1    KP975090    ALT31609.1    AF211183    AAF19653.1    KY130482    APG32550.1    KQ458575    KPJ05750.1    AF117585    AJ973454    AAF16707.1    CAJ01501.1    KT991356    ANA75022.1    AF255920    AAF71291.1    AY101512    AAM77041.1    MG820747    AYP30839.1    ODYU01007633    SOQ50583.1    HQ874661    AEB54579.1    PZC77860.1    AY766374    AAV34686.1    KM275346    AKF42443.1    RSAL01000019    RVE52707.1    BABH01021424    DQ855509    EF514895    AJ973404    ABH88196.1    ABP93832.1    CAJ01451.1    AB243748    BAF34353.1    EF186794    ABM67689.1    GDQN01004159    JAT86895.1    EU439267    ACA24124.1    AB180452    BAD26696.1    KT357403    AND82451.1    ODYU01004316    SOQ44061.1    ODYU01008953    SOQ52980.1    AF211182    AAF19652.1    PCG67365.1    KT261673    ALJ30213.1    ODYU01004317    SOQ44062.1    AJ973464    CAJ01511.1    MG518397    AYC12347.1    KM365205    AIX97840.1    KY130483    APG32551.1    KP975088    ALT31607.1    KX655952    AOG12901.1    MG788197    AXF48715.1    PCG73979.1    PDGJ01000352    POC48375.1    MG518402    AYC12352.1    KP975086    ALT31605.1    AK401117    BAM17739.1    AB430773    BAG71916.1    KM236065    AIW65102.1    GCVX01000014    JAI18216.1    PCG67368.1    MH027982    AZB49400.1    EZ407137    ACX53700.1    PZC77868.1    PCG67369.1    KM236061    AIW65098.1    KC305877    AGH20053.1    PCG67366.1    PCG73968.1    EZ407165    ACX53727.1    PCG73983.1    PCG67370.1    JTDY01001559    KOB73530.1    LC027720    BAV56823.1    AK402342    BAM18964.1    EZ407270    ACX53825.1    MG546589    AYD42212.1    JX305306    AFR92095.1    PZC77865.1    PZC77866.1   
Pfam
PF03392   OS-D
Interpro
IPR036682   OS_D_A10/PebIII_sf        + More
IPR005055   A10/PebIII       
SUPFAM
SSF100910   SSF100910       
Gene 3D
PDB
1N8V     E-value=3.13408e-26,     Score=287

Ontologies

Topology

SignalP
Position:   1 - 17,         Likelihood:  0.998445
 
 
Length:
125
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.09443
Exp number, first 60 AAs:
0.09443
Total prob of N-in:
0.18401
outside
1  -  125
 
 

Population Genetic Test Statistics

Pi
206.788187
Theta
164.313071
Tajima's D
0.551662
CLR
0.630223
CSRT
0.533523323833808
Interpretation
Uncertain

Multiple alignment of Orthologues

 
 

Gene Tree

 
 
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