Gene

KWMTBOMO11529

Pre Gene Modal

BGIBMGA004047

Annotation

chemosensory_protein_4_variant_[Bombyx_mori]

Location

Bomo_Chr19(-):7764700-7766804      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 1.335 Nuclear   Reliability : 1.501

CDS

ATGTTTATGCTCTTCATAATTTCCTTCATAATCGTCCCGGTGCTCAAATGTTGTGGCACAGAAACTTCAACTTACACAACTCAGTACGATGAGGTCGATATAAAGGAAATTATGGGCAACGAACGCTTGTTGGTAGCTTATATCGGCTGCTTGCTTGACAAAAACCCATGCACCCCGGAAGGAAAGGAATTGAAGCGAAATATTCCGGATGCTTTACAAAGCGACTGCAGTAAATGTAGCGACAAACAGCGGGAGAACGCCGACGCTTGGATTGAATTTATGATAGACAACCGTCCAGAAGATTGGACAAAGCTTGAAGAAAGATACAACCCAGACGGCAGCTACAGGACCAAATATTTGGAGGGCAAACACAACGCCACAAGCAACGTTGATGAATCTAAATAA

Protein

MFMLFIISFIIVPVLKCCGTETSTYTTQYDEVDIKEIMGNERLLVAYIGCLLDKNPCTPEGKELKRNIPDALQSDCSKCSDKQRENADAWIEFMIDNRPEDWTKLEERYNPDGSYRTKYLEGKHNATSNVDESK

Uniprot

H9J3G0   H9C8N5   H9C8L4   H9C8N6   H9C8M1   H9C8Q4   + More
H9C8M4   H9C8L6   H9C8P8   H9C8M0   H9C8L5   H9C8M2   H9C8N7   H9C8P9   H9C8L3   H9C8M5   Q0MRJ1   H9C8M7   A0A0A1CN97   A0A3B0EMP9   A0A1V1WC32   A0A2W1BS15   A0A2H1WTV4   A0A172QDQ0   A0A2A4J066   A0A2K8GKZ3   A0A0C4K659   U5Q2S7   A0A1B4ZBL0   A0A076E961   Q3LB50   V9PYP8   A0A076EDA9   J3JWD4   I1VJ19   A0A1L2BLC4   M4VRK2   A0A1B3P5N1   A0A0K8TVD2   A0A2P9JZD5   A0A212FG07   I4DKW7   E9IV35   A0A345BEN3   A0A109VYC4   A0A194QVW8   A0A1J1IXH0   A0A0S3J433   A0A2H4ZB76   A0A194QK46   A0A310SBG0   A0A1I9HZN7   A0A151IQQ5   A0A0M4FLX8   A0A195FIZ9   A2IBC2   A0A195DMI7   A0A1J0KKG9   A0A158P251   A0A1J0KKY2   A0A195AW87   A0A182QLL8   A0A2U9NJE8   A0A2S0BE26   A0A1W6GWH8   A0A151WZY7   A0A386H987   A0A0M4U222   A0A0J7KCJ4   A0A1W6L1C2   F4W6D4   E2ACN5   Q3LBA6   A0A182SQ39   A0A345BT14   A0A1W4WBY9   A0A219T800   E2CAG4   A0A3L8DAQ0   A0A182P4W7   Q0MRL9   A0A1I8N2C2   A0A0X8DBS1   A0A0L0CBN6   A0A163AMY3   J7HS20   A0A0N9K2G7   A0A068F7S6   A0A1I9HZQ6   T1E9H3   T1DSW1   A0A182NU81   A0A1B6D2D2   A0A154P5R4   A0A067RHP2   A0A068F6S2   A0A182W795   A0A182F6D7   A0A182RC93  

Pubmed

19121390    24551045    17175443    28756777    28736530    23894529    + More
24998398    22516182    23537049    23517120    27538507    26017144    22118469    22651552    21282665    29727827    26354079    26626891    29133804    24893337    20495011    27836740    21347285    26310137    21719571    20798317    29636701    30249741    18362917    19820115    25315136    26108605    26164593    25880816    24845553   

EMBL

BABH01021421    JQ253674    JQ253679    JQ253682    JQ253691    JQ253703    + More
JQ253706    AFF18094.1    JQ253670    AFF18073.1    JQ253692    AFF18095.1    JQ253677    AFF18080.1    JQ253710    AFF18113.1    JQ253680    AFF18083.1    JQ253672    AFF18075.1    JQ253704    AFF18107.1    JQ253676    AFF18079.1    JQ253671    AFF18074.1    JQ253678    AFF18081.1    JQ253693    AFF18096.1    JQ253705    AFF18108.1    JQ253668    JQ253669    AFF18072.1    JQ253681    AFF18084.1    DQ855518    ABH88205.1    JQ253683    AFF18086.1    KM365200    AIX97835.1    RBVL01000208    RKO10632.1    GENK01000035    JAV45878.1    KZ149917    PZC77859.1    ODYU01010622    SOQ55854.1    KT357398    AND82446.1    NWSH01004136    PCG65465.1    KX585423    ARO70316.1    KF026057    AHX37226.1    KC907757    AGY49270.1    LC027709    BAV56812.1    KF487625    AII01023.1    AJ973456    CAJ01503.1    KC579439    AHC05677.1    KF487642    AII01040.1    BT127552    AEE62514.1    APGK01034856    JQ855640    KB740923    AFI45003.1    ENN78079.1    KT282973    ALS03830.1    KC113412    AGI05160.1    KX655945    AOG12894.1    GCVX01000007    JAI18223.1    KY826446    AVI04874.1    AGBW02008742    OWR52660.1    AK401935    BAM18557.1    GL766116    EFZ15562.1    MG788189    AXF48707.1    KJ186798    AIX97110.1    KQ461073    KPJ09678.1    CVRI01000059    CRL03241.1    KT381520    ALR72526.1    MF975427    AUF73003.1    KQ458575    KPJ05749.1    GGOB01000031    MCH29427.1    KF984157    AIX97040.1    KQ976755    KYN08565.1    KR003782    ALC79596.1    KQ981523    KYN40378.1    EF186791    JN410821    ABM67686.1    AEP25397.1    KQ980724    KYN14047.1    KX290647    APC94218.1    ADTU01006983    KX298783    APC94300.1    KQ976731    KYM76229.1    AXCN02000772    MF385107    AWT23279.1    KR812320    ANG08520.1    KY885475    ARM20141.1    KQ982625    KYQ53471.1    MG546590    AYD42213.1    LC028285    BAS29778.1    LBMM01009691    KMQ87936.1    KX609432    ARN17839.1    GL887707    EGI70269.1    GL438568    EFN68779.1    DQ855485    AJ973400    ABH88172.1    CAJ01447.1    MG637035    AXF54071.1    KU342583    ANT46050.1    GL453976    EFN75075.1    QOIP01000010    RLU17416.1    DQ855490    KQ971352    ABH88177.1    EFA07563.1    KT381696    AMA98187.1    JRES01000644    KNC29650.1    LT555327    SAJ59012.1    JQ979432    AFQ07769.1    KP963714    ALG36162.1    KJ702168    AID61322.1    KF984186    AIX97069.1    GAMD01001848    JAA99742.1    GAMD01000050    JAB01541.1    GEDC01017460    JAS19838.1    KQ434809    KZC06684.1    KK852498    KDR22553.1    KJ702170    AID61324.1   

Proteomes

UP000005204    UP000276569    UP000218220    UP000019118    UP000007151    UP000053240    + More
UP000183832    UP000053268    UP000078542    UP000078541    UP000078492    UP000005205    UP000078540    UP000075886    UP000075809    UP000036403    UP000007755    UP000000311    UP000005203    UP000075901    UP000192223    UP000008237    UP000279307    UP000075885    UP000007266    UP000095301    UP000037069    UP000075884    UP000076502    UP000027135    UP000075920    UP000069272    UP000075900   

PRIDE

H9J3G0    H9C8N5    H9C8L4    H9C8N6    H9C8M1    H9C8Q4    + More
H9C8M4    H9C8L6    H9C8P8    H9C8M0    H9C8L5    H9C8M2    H9C8N7    H9C8P9    H9C8L3    H9C8M5    Q0MRJ1    H9C8M7   

Pfam

PF03392   OS-D

Interpro

IPR036682   OS_D_A10/PebIII_sf        + More
IPR005055   A10/PebIII       

SUPFAM

SSF100910   SSF100910       

Gene 3D

1.10.2080.10    

ProteinModelPortal

H9J3G0   H9C8N5   H9C8L4   H9C8N6   H9C8M1   H9C8Q4   + More
H9C8M4   H9C8L6   H9C8P8   H9C8M0   H9C8L5   H9C8M2   H9C8N7   H9C8P9   H9C8L3   H9C8M5   Q0MRJ1   H9C8M7   A0A0A1CN97   A0A3B0EMP9   A0A1V1WC32   A0A2W1BS15   A0A2H1WTV4   A0A172QDQ0   A0A2A4J066   A0A2K8GKZ3   A0A0C4K659   U5Q2S7   A0A1B4ZBL0   A0A076E961   Q3LB50   V9PYP8   A0A076EDA9   J3JWD4   I1VJ19   A0A1L2BLC4   M4VRK2   A0A1B3P5N1   A0A0K8TVD2   A0A2P9JZD5   A0A212FG07   I4DKW7   E9IV35   A0A345BEN3   A0A109VYC4   A0A194QVW8   A0A1J1IXH0   A0A0S3J433   A0A2H4ZB76   A0A194QK46   A0A310SBG0   A0A1I9HZN7   A0A151IQQ5   A0A0M4FLX8   A0A195FIZ9   A2IBC2   A0A195DMI7   A0A1J0KKG9   A0A158P251   A0A1J0KKY2   A0A195AW87   A0A182QLL8   A0A2U9NJE8   A0A2S0BE26   A0A1W6GWH8   A0A151WZY7   A0A386H987   A0A0M4U222   A0A0J7KCJ4   A0A1W6L1C2   F4W6D4   E2ACN5   Q3LBA6   A0A182SQ39   A0A345BT14   A0A1W4WBY9   A0A219T800   E2CAG4   A0A3L8DAQ0   A0A182P4W7   Q0MRL9   A0A1I8N2C2   A0A0X8DBS1   A0A0L0CBN6   A0A163AMY3   J7HS20   A0A0N9K2G7   A0A068F7S6   A0A1I9HZQ6   T1E9H3   T1DSW1   A0A182NU81   A0A1B6D2D2   A0A154P5R4   A0A067RHP2   A0A068F6S2   A0A182W795   A0A182F6D7   A0A182RC93  

PDB

2GVS     E-value=8.5371e-21,     Score=240

KEGG

778485    no KO assigned | (RefSeq) CSP12; chemosensory protein 12

GO

GO:0016301   GO:0016021  

PANTHER

PTHR11257  

SignalP

Position:   1 - 19,         Likelihood:  0.981107

 

 

Length:

134

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.10414

Exp number, first 60 AAs:

0.10414

Total prob of N-in:

0.01812

outside

1  -  134

 

 

Pi

231.382475

Theta

187.478833

Tajima's D

0.58469

CLR

0.326154

CSRT

0.541222938853057

Interpretation

Uncertain