SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11528
Annotation
PREDICTED:_uncharacterized_protein_LOC101743765_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 1.486
 

Sequence

CDS
ATGTCTTCGAAATTCGTAATATTATTATTCATATCGGTCGCGTCGTCCGAAATAACAGCGCCTGGAATAGATAGAAGTTATAGCGATGGTGTGAAGAGCGTAGGTTACAGTGTGATATACGGGGACGAGGACATGACCATCATCAATCAGGCAGTCAGCGATGCTGAGAAATCTAGTATGCTGAAGAGCCGAGTGAATTTAAATGAAGCTATAGCTCCCCTGCCCTCGCAGGACGTAAAATGTTTAATGTCTGTGGACCGTTACTGTTCAAAGGAAATGTTGCAAACAAAAGGTCTGTTGATTCAAGCCTTAAAAAACAATTGCGAAAAATGTACTCAAAAAGAGAAAGAAGTCGCGGGAAGAACAATTGCTTCTATGATGGCACACGACTCCGTCGCTTGGAAAATGTTCCTCACTAGGTCAGCATTATTAAGTATTGCACGTAAGAAACGTGTCAAGATTGAAGACGTAAAACTTAAAACAAAGGGGCGCCCAGAAGAAATAACATCTAAAAGCAAATTCACGTTACCTGGGTTTAATGTAAGAGTCAAACGACACGCGGCGGTGAAAATATAA
Protein
MSSKFVILLFISVASSEITAPGIDRSYSDGVKSVGYSVIYGDEDMTIINQAVSDAEKSSMLKSRVNLNEAIAPLPSQDVKCLMSVDRYCSKEMLQTKGLLIQALKNNCEKCTQKEKEVAGRTIASMMAHDSVAWKMFLTRSALLSIARKKRVKIEDVKLKTKGRPEEITSKSKFTLPGFNVRVKRHAAVKI

Summary

Pfam
PF03392   OS-D
Interpro
IPR036682   OS_D_A10/PebIII_sf        + More
IPR005055   A10/PebIII       
SUPFAM
SSF100910   SSF100910       
Gene 3D
PDB
2GVS     E-value=0.00108907,     Score=96

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.969128
 
 
Length:
191
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.23976
Exp number, first 60 AAs:
0.21695
Total prob of N-in:
0.02729
outside
1  -  191
 
 

Population Genetic Test Statistics

Pi
187.170196
Theta
159.217447
Tajima's D
0.562392
CLR
0.056986
CSRT
0.527773611319434
Interpretation
Uncertain
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