Gene

KWMTBOMO11522  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004050

Annotation

PREDICTED:_CREB-regulated_transcription_coactivator_1_[Bombyx_mori]

Location

Bomo_Chr19(-):7678560-7683694      View in EpiBrowser

Location in the cell

Nuclear   Reliability : 4.625

CDS

ATGGCAAATCCAAGGAAATTCAGTGAAAAAATTGCCCTCCATAATCAAAAGCAGGCTGAGGAAACTGCCGCTTTTGAAAAAATTATGCGTGAAGTTTCCGACGCAACCAATAAGCCTGAAGAAGCTACACTGGCAACACAATATGGCCTGGGTGGTGGTCGCAGTGGAGGGACATCACCGTCTCGTTCGCCTGGTCAAAGAGGCCGCACCTCCTCATCTGTAGGTCCAATGCGCCGACCTGCCGACCGGAAGCATGATACCAGTCCTTATGGAAGCACCGTTTACTTAAGTCCACCACCGGACAGCAACTGGAGACGTACGAACTCTGATTCGGCGTTACACCAGTCATGTGGGGGCGACCAGCAAGCGGGTGCGCCGTCGCTTTCCCCCCACCATCATCCGCTACATTCACACGCACACCCTCACTTGCATCCGCATCAAAATCATAGGAGAGGTAAGAATTTTTTTAATAAAGTGTAG

Protein

MANPRKFSEKIALHNQKQAEETAAFEKIMREVSDATNKPEEATLATQYGLGGGRSGGTSPSRSPGQRGRTSSSVGPMRRPADRKHDTSPYGSTVYLSPPPDSNWRRTNSDSALHQSCGGDQQAGAPSLSPHHHPLHSHAHPHLHPHQNHRRGKNFFNKV

Uniprot

A0A3S2M7D7   A0A2W1B7Y7   A0A194QJN5   A0A212FG04   A0A2H1WAZ5   A0A1Y1L993   + More
A0A1L8DHE0   A0A1L8DHP2   A0A1L8DHQ0   A0A1Y1L387   A0A1Y1L3I5   A0A1Y1L5R4   A0A1B6IJ98   D6WQZ2   A0A2H8TG53   A0A0P4VP59   A0A194R1G0   A0A1Q3EYB5   E0VAI9   A0A069DTA4   A0A023EZ59   A0A0V0GAR9   A0A1Q3EZU4   A0A1Q3EZJ0   V9I8L5   V9IAS1   A0A0C9QK55   A0A2M4CYZ3   A0A2M4CZ20   A0A2M4CYY8   A0A2M4BFR7   A0A2M4BGC5   A0A2M4BGB5   A0A0A9W2Z9   A0A2S2R5N4   A0A0A9W1U8   A0A1B6D9Y1   A0A2R7WVQ2   A0A3B1JHY5   A0A2C9M146   A0A3Q3K3F7   A0A3Q1FVT4   A0A3Q1B350   A0A3Q2PJK3   A0A3Q3F4F2   A0A3B3HL36   A0A3P8WNP5   A0A3P9J9S0   A0A3B3BA25   A0A3Q2VQF5   A0A3P8R4C0   A0A1S3T4R7   A0A336LQY8   A0A2C9M1G9   A0A2C9M147   A0A3S0Z4Y8   A0A2C9M115   A0A1S3R026   A0A1A9WPZ1   A0A1S3KWR0   A0A3P8VKY3   A0A1W5B0W0   A0A3B4V5W0   A0A3B4EA58   A0A131ZAA3   A0A2D0Q5R2   A0A182QU58   A0A3B4V678  

Pubmed

28756777    26354079    22118469    28004739    18362917    19820115    + More
27129103    20566863    26334808    25474469    25401762    26823975    25329095    15562597    17554307    24487278    29451363    26830274   

EMBL

RSAL01000019    RVE52719.1    KZ150235    PZC71969.1    KQ458575    KPJ05742.1    + More
AGBW02008742    OWR52653.1    ODYU01007459    SOQ50249.1    GEZM01066138    JAV68146.1    GFDF01008202    JAV05882.1    GFDF01008214    JAV05870.1    GFDF01008108    JAV05976.1    GEZM01066136    JAV68149.1    GEZM01066140    JAV68144.1    GEZM01066143    JAV68141.1    GECU01020710    JAS86996.1    KQ971351    EFA06486.2    GFXV01001291    MBW13096.1    GDKW01000002    JAI56593.1    KQ461073    KPJ09686.1    GFDL01014752    JAV20293.1    DS235006    EEB10395.1    GBGD01001709    JAC87180.1    GBBI01004204    JAC14508.1    GECL01000961    JAP05163.1    GFDL01014219    JAV20826.1    GFDL01014329    JAV20716.1    JR036851    AEY57430.1    JR036850    AEY57429.1    GBYB01000987    JAG70754.1    GGFL01006372    MBW70550.1    GGFL01006369    MBW70547.1    GGFL01006368    MBW70546.1    GGFJ01002755    MBW51896.1    GGFJ01002717    MBW51858.1    GGFJ01002707    MBW51848.1    GBHO01041808    GBHO01041807    GDHC01020758    JAG01796.1    JAG01797.1    JAP97870.1    GGMS01016061    MBY85264.1    GBHO01041810    GBHO01041805    GDHC01012372    JAG01794.1    JAG01799.1    JAQ06257.1    GEDC01014794    JAS22504.1    KK855713    PTY23627.1    UFQT01000056    SSX19103.1    RQTK01001330    RUS70806.1    GEDV01000343    JAP88214.1    AXCN02002201   

Proteomes

UP000283053    UP000053268    UP000007151    UP000007266    UP000053240    UP000009046    + More
UP000018467    UP000076420    UP000261600    UP000257200    UP000257160    UP000265000    UP000264800    UP000001038    UP000265120    UP000265200    UP000261560    UP000264840    UP000265100    UP000087266    UP000271974    UP000091820    UP000192224    UP000261420    UP000261440    UP000221080    UP000075886   

Pfam

PF12884   TORC_N        + More
PF12886   TORC_C
PF12885   TORC_M

Interpro

IPR024783   TORC_N        + More
IPR024785   TORC_C       
IPR024786   TORC       
IPR024784   TORC_M       
IPR001307   Thiosulphate_STrfase_CS       

ProteinModelPortal

A0A3S2M7D7   A0A2W1B7Y7   A0A194QJN5   A0A212FG04   A0A2H1WAZ5   A0A1Y1L993   + More
A0A1L8DHE0   A0A1L8DHP2   A0A1L8DHQ0   A0A1Y1L387   A0A1Y1L3I5   A0A1Y1L5R4   A0A1B6IJ98   D6WQZ2   A0A2H8TG53   A0A0P4VP59   A0A194R1G0   A0A1Q3EYB5   E0VAI9   A0A069DTA4   A0A023EZ59   A0A0V0GAR9   A0A1Q3EZU4   A0A1Q3EZJ0   V9I8L5   V9IAS1   A0A0C9QK55   A0A2M4CYZ3   A0A2M4CZ20   A0A2M4CYY8   A0A2M4BFR7   A0A2M4BGC5   A0A2M4BGB5   A0A0A9W2Z9   A0A2S2R5N4   A0A0A9W1U8   A0A1B6D9Y1   A0A2R7WVQ2   A0A3B1JHY5   A0A2C9M146   A0A3Q3K3F7   A0A3Q1FVT4   A0A3Q1B350   A0A3Q2PJK3   A0A3Q3F4F2   A0A3B3HL36   A0A3P8WNP5   A0A3P9J9S0   A0A3B3BA25   A0A3Q2VQF5   A0A3P8R4C0   A0A1S3T4R7   A0A336LQY8   A0A2C9M1G9   A0A2C9M147   A0A3S0Z4Y8   A0A2C9M115   A0A1S3R026   A0A1A9WPZ1   A0A1S3KWR0   A0A3P8VKY3   A0A1W5B0W0   A0A3B4V5W0   A0A3B4EA58   A0A131ZAA3   A0A2D0Q5R2   A0A182QU58   A0A3B4V678  

PDB

5ZKO     E-value=1.32229e-05,     Score=111

KEGG

101746230    K15309 CREB-regulated transcription coactivator 1 | (RefSeq) CREB-regulated transcription coactivato

GO

GO:0032793   GO:0008140   GO:0005737   GO:0005634   GO:0051289   GO:0016021   GO:0045944   GO:0004792   GO:0000413   GO:0016020   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

PANTHER

PTHR13589  

Length:

159

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.29179

outside

1  -  159

 

 

Pi

169.080769

Theta

164.578356

Tajima's D

-0.522496

CLR

1.546088

CSRT

0.23788810559472

Interpretation

Uncertain