SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11517  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004060
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_uncharacterized_protein_LOC101745941_[Bombyx_mori]
Location
Bomo_Chr19(+):7609405-7613331      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.726
 

Sequence

CDS
ATGACAATAAAAAATAAAAAGACTAAACAGTCGTCCGAAGTGACTTCGTCCAGTAGTGCTTCGACGAGTGTCCAAAAAACAAGTAAATCCACGTCGGTGCAACAAAGCAGTAACACCCTGCAAAAGGTCAGCTCTGGAAAGAAGGTGCGCTATATCGATGTTAAGGTCGAGGAAGATGATCCCTTGATGATAACAGACGTTAGTGACCACACGTCGATTGCCGGATCAACTGTTTCTGAACATTATAACAGTCACCCGCACTACATAATCACAGAGGCTCCCTCAATGAGTGATCTTTCTCAAATGAGGTCACAGGAACTTCAAGTAAGTGACATGACGCAGTCAACAACCGGAGAGTTCGTCTCTAGCTCTGTTCAAGAATCGTCAACTTCGCAACAAACCAGTTCTAAAAGCGAATCGTTCCAGGCTACATCATCTTCTGTTCAGCGTTCTGGTTCGAGTCACAGCACACAAAGCCAATCTTTCGATAAATCAGTAGATTCTTCAACTTCGAATCAGACACTGAATACGGCTTTTATTGACAGCTCAGCTAGAAATGTAACAGATTCTAGAAATACTTTTTCAACAAGATCTCAAACGGCGAATGCGTCAAATAACTTTCTTCAGACTGAAAGACAAAATTTGGTTAGACAGACAGCAGAGGGAGTGCGATCGGTTAGTCAATCTAACGTCGATGAACAGCAAGGACTTGGACGCGAGAATGTCACTTATCGAAATTCACCGGACCCATCTCAAAGAATACAGACGGTTCGTTCTGATTCTTCTAATTTTTATGGCGGTGAAGGAAGCCTTGACAGAAACGTCAAAAGTAAGGAGTATACAAGTACGTCTAAAACAAGTGAAAGCAAGAGTAGCAATGTGACAAAATCTTCTTCTTCCTCTTACGTGGTTGAAATTGTGGACGGTAAAGAGCGTATTATTGACAGTTCGAAGAGAGAATGGGGTGATGCTCAAGAGCATGCTACAAATGAATCGTACGCAAGCGTTAGTGGTACAGATATCAAACCTCAATCAGCGTACAGCGTTAAAAACTATGATATGAAATCCAAATATGACACAGGCAAAGAAGGCCAGAAACCAACAAGTGAGCTCACCGTAAAGGAGGACTCAAAATATATTAAAGATGGAAAGCATATTACAACTCATGCAAGTATTGTGTCAGAGAAAGATAACTTACGCCACCAGCAATCTACTTCAACACAAGACCAACTGACATCCAGTGATGACCCTCGTCATCCAAAACTTACAACATCAAGCAATGTTTACACTAATAGTGATAATATTTATGATCAAAAGAATACCAACATTAACCAGCAGACTCTTTATTCAGATCAAAATATGACAACCAACCAGCGAGAAGATTACACCACTAATACTACTAATTACAACACGAAAAATGTATACACTGATCAAAGGAACGTTTACAGCGATAAAAGTCACACAGATACTGTTGAAGATGTAAGAAACAGTAAACAGATAGTCACTGATCGTAAGCGAAATGTTAACCAAACCGATTCATCAAACTTCTACGGTTACGATACTACCATACAAAATGAACTAAGGAAAGTCGGTGACATTTTACAAGTGAAAGATACAGACAATATAAACTTTTCTACCAAAATACTTAAGAGCAATACAAGCAGTGCTCAGCAGGCTACAACATCGTCTTATGTAGTAGAAGTTGTCGATGGGAAAGAAAGAATCGTGGACAGCTCACACAGAGAATGGGGTGATAATAAAGAACATTCAACATATGAAAAGAGTCATAACGTTAGTGGACCTGGAATCAAGCCCGAACATGAATATGCTCGTCACGTACTAGATAAGGAATCTCATTATGATACTGGAAAAAATGGGATACCGACTAGCTCTACATATGTTGCCGAAGAATCAGCTTTATACAAGAATGGTAAAGAAATAGCGTCTACGAAGAATGTTTATGGTGGAGATTTTACTAAGAGAAAAGCAATAACCGAACACGATCAAACCGATGATATTCACAATAAACGAATTCAAGACACTACTGATCAAACTTACTCAACTGTAAGTGAATCCAAATCCTCTGATACTGTTAGGGATTCAAAGGATGTCACTAAAACTACGGATTTTATTACCACTGAAATACAAAATCTGTCTAAAGAATCAACTTCAAAATCAGAAACTCAGACTAAAGATACTTTGACAAGCTATGAAAGAAGTACCGGGACGTGGAATGGTAAATTTGTTTATGAAAAAGATGATGATAGGCCAAAAAGACCCAAGGAAATGTCACCTTTTGGAAGACCCGAACAACCTAGACACCATCTGAAACGGCAAGATACCGAAGAGAATATAATTATATCATCGAGGGACATAAGAGATTTTACGTCCATAAGCGATTTACGTAAAATAATTGAATCATCCCAATCAACTAAAGATGTGACAGTAAGTAATAAGAATATCGTAATAAAGAGGAATATAGACGATCGTGTGCTCAAGGATATTATTGACACAGTTAAGAAGTATCCGTTTAAAAGAATTGAAAAGGTTTCTTTTGGGACAAAAATTAACGAAGATGTCAAAGATTTATACGAAGGCATTGATACTGAAGAAAGTACGGTATTGACAACCACAACCGGAGAAACGACTAGAAAGTCTTTTGAAATCGAAAAGAACAGAAGCCAAGTTGAAGTGACGCGGTATATAACTGAAAATGGTGTCACCAGGAAGATAACAACGTACGAAGAACCGAAAGTGGATGATAAAATTAAGACGGACGTCTTCGTCGATAAGAGCAAGTTAGACTTCAAAAACTTGACCGATGTCCAAACGACGGAAGACGTAATTCGCGAGTACGACGTGGTAGACCGTGCTATTACAGATACTACAAGGGAAGATTACGTCCGCACTGTTTACGACGAGACCATCATAGATGATAGGAAAACTGTGCGCGACGACCGAATCACCACCGAAGAGACCGTTATCATCGATGAAACCCGACCAAGACATGGTGGCCCCAAGAAGCCTGACGTTAACAAGGAACAGTGCATCTGCGAAATGTGCACTTGTGGGCGTGGTATATCAGATGATAATGATAAATTATCAACTTAG
Protein
MTIKNKKTKQSSEVTSSSSASTSVQKTSKSTSVQQSSNTLQKVSSGKKVRYIDVKVEEDDPLMITDVSDHTSIAGSTVSEHYNSHPHYIITEAPSMSDLSQMRSQELQVSDMTQSTTGEFVSSSVQESSTSQQTSSKSESFQATSSSVQRSGSSHSTQSQSFDKSVDSSTSNQTLNTAFIDSSARNVTDSRNTFSTRSQTANASNNFLQTERQNLVRQTAEGVRSVSQSNVDEQQGLGRENVTYRNSPDPSQRIQTVRSDSSNFYGGEGSLDRNVKSKEYTSTSKTSESKSSNVTKSSSSSYVVEIVDGKERIIDSSKREWGDAQEHATNESYASVSGTDIKPQSAYSVKNYDMKSKYDTGKEGQKPTSELTVKEDSKYIKDGKHITTHASIVSEKDNLRHQQSTSTQDQLTSSDDPRHPKLTTSSNVYTNSDNIYDQKNTNINQQTLYSDQNMTTNQREDYTTNTTNYNTKNVYTDQRNVYSDKSHTDTVEDVRNSKQIVTDRKRNVNQTDSSNFYGYDTTIQNELRKVGDILQVKDTDNINFSTKILKSNTSSAQQATTSSYVVEVVDGKERIVDSSHREWGDNKEHSTYEKSHNVSGPGIKPEHEYARHVLDKESHYDTGKNGIPTSSTYVAEESALYKNGKEIASTKNVYGGDFTKRKAITEHDQTDDIHNKRIQDTTDQTYSTVSESKSSDTVRDSKDVTKTTDFITTEIQNLSKESTSKSETQTKDTLTSYERSTGTWNGKFVYEKDDDRPKRPKEMSPFGRPEQPRHHLKRQDTEENIIISSRDIRDFTSISDLRKIIESSQSTKDVTVSNKNIVIKRNIDDRVLKDIIDTVKKYPFKRIEKVSFGTKINEDVKDLYEGIDTEESTVLTTTTGETTRKSFEIEKNRSQVEVTRYITENGVTRKITTYEEPKVDDKIKTDVFVDKSKLDFKNLTDVQTTEDVIREYDVVDRAITDTTREDYVRTVYDETIIDDRKTVRDDRITTEETVIIDETRPRHGGPKKPDVNKEQCICEMCTCGRGISDDNDKLST

Summary

Uniprot
H9J3H3   A0A2A4J8A6   A0A2H1WBP3   A0A0L7KNQ9   A0A194QWK5   A0A212FGF1   + More
A0A3S2LS65   A0A194QK36   A0A1E1WJN9  
Pubmed
19121390    26227816    26354079    22118469   
EMBL
BABH01021408    BABH01021409    NWSH01002484    PCG68201.1    ODYU01007459    SOQ50252.1    + More
JTDY01008187    KOB64691.1    KQ461073    KPJ09689.1    AGBW02008678    OWR52812.1    RSAL01000019    RVE52722.1    KQ458575    KPJ05739.1    GDQN01003973    JAT87081.1   
Proteomes
UP000005204    UP000218220    UP000037510    UP000053240    UP000007151    UP000283053    + More
UP000053268   
PRIDE
H9J3H3   
Interpro
IPR033336   SAXO1/2       
ProteinModelPortal
H9J3H3   A0A2A4J8A6   A0A2H1WBP3   A0A0L7KNQ9   A0A194QWK5   A0A212FGF1   + More
A0A3S2LS65   A0A194QK36   A0A1E1WJN9  

Ontologies

KEGG
101745941    no KO assigned | (RefSeq) uncharacterized LOC101745941
GO
GO:0008017  
PANTHER
PTHR31516  

Topology

Length:
1036
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00006
outside
1  -  1036
 
 

Population Genetic Test Statistics

Pi
254.754571
Theta
233.551757
Tajima's D
0.371736
CLR
0
CSRT
0.474376281185941
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
26280517 EVVYPFGDITDPVTGK 100.00 3e-15
28467696 EWEPPAPQPFK 100.00 3e-15
26822097 AITDTTREDYVR 95.65 1e-08
26280517 NVISEAEINNISNNVVQK 95.65 1e-08
27102218 SESFQATSSSVQR 95.65 1e-08
28467696 NVNQTDSSNFYGYDTTIQNEIR 95.65 1e-08
26822097 NITDVQTTEDVIREYDVVDR 95.45 5e-08
26280517 NTICEFTGDIIR 95.45 5e-08
28467696 NVMGINCDQCTENHWR 95.45 5e-08
28467696 IVDSNESVIPVIK 100.00 1e-07
26280517 SAPIDADCHIVVAADVIGR 100.00 2e-05
28467696 SHIKEAIETNCAK 100.00 2e-05
26280517 RINDISSESIQIFASQNITPSR 100.00 0.001
26280517 NVYGFMDDMDEK 100.00 0.001
26280517 AIPCIVDVRDEK 100.00 0.002
26822097 HITTHASIVSEK 100.00 0.006
26280517 IQDIGVENTEENRR 100.00 0.006
27102218 NVNQTDSSNFYGYDTTIQNEIRK 100.00 0.006
28467696 IQDTCTSECIFSAEYHAGAIAIR 100.00 0.006
26280517 AITDDQIETIFGK 100.00 0.011
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