SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11513  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA004054
Annotation
PREDICTED:_coiled-coil_domain-containing_protein_112-like_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 3.582
 

Sequence

CDS
ATGGTTGAAATAAAAAATGATGAAAACCAAATACTAGCAGAGATGAAACAAAATTCAAATATAACGAACAAGATCAGAATCCCAAAATCGCATCTACATTCCGCGACTTATAAAGACATGGTTCCCAGTCCTGTTAAATTGTTCATGAATTCGCCGTTCAAATGTCCGGCCGTTCAAGAGTTCCAAGAATTTATTGCAAACAGTAAAAATCGTCATGGTGGCTGGAATGAATATTATCACAATATTTTTGTCAAAACATGGATGAAATATTTTAGGTTAAATTCCGTTGATGATTTTGATATGTTCGTATCAAGTCTAGAATCTTCGGAATATTTCAATGATTTTCTTTTTGAACTACAAGAAAAATTGCAAGTTTTCAAAATGGATGACATAATATCTCACTTTAAATGGTACGCCAAGTTTGTTTACTTGAAAGAAAATCAACAAAAAGCTATTAATAAATGGAAAACAAAGAGGAATTTGGTGAAGCAATCATCAAAGATGGAGTTTGATAAACGTGCCCAAATCGATTTACAACGATGCACAAGTGCGCGTGAAAATTCAGACACAATAATCGACGAAGGCAACAGATGGGATCTCGTTAAAGAATCTATGGATTCAATTATGCGAGAACCGGAAAATCCGAATGGGTTGCATAAAGATGAAAAAGATACAAGCGTTACTGACTTAATGGCTAATTTGTTCAATAAGGAACGTAAACTGAATGATTATCGGAGACCCACTGCACAATGGATCAATAGATGTAAGACAACTGAAGAAAAACAGAATTGTTTCAATAATGAAACAGCCTTAGAAACGATAAGTAAAAGGGGCGTGCCTTCCTGGAGAACCAATTTGTAA
Protein
MVEIKNDENQILAEMKQNSNITNKIRIPKSHLHSATYKDMVPSPVKLFMNSPFKCPAVQEFQEFIANSKNRHGGWNEYYHNIFVKTWMKYFRLNSVDDFDMFVSSLESSEYFNDFLFELQEKLQVFKMDDIISHFKWYAKFVYLKENQQKAINKWKTKRNLVKQSSKMEFDKRAQIDLQRCTSARENSDTIIDEGNRWDLVKESMDSIMREPENPNGLHKDEKDTSVTDLMANLFNKERKLNDYRRPTAQWINRCKTTEEKQNCFNNETALETISKRGVPSWRTNL

Summary

Interpro
IPR019734   TPR_repeat        + More
IPR029058   AB_hydrolase       
IPR026151   Maspardin       
IPR011990   TPR-like_helical_dom_sf       
IPR039902   CCDC148/CCDC112       
SUPFAM
SSF48452   SSF48452        + More
SSF53474   SSF53474       
Gene 3D

Ontologies

GO

Topology

Length:
286
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00062
Exp number, first 60 AAs:
0
Total prob of N-in:
0.09001
outside
1  -  286
 
 

Population Genetic Test Statistics

Pi
206.990427
Theta
179.798675
Tajima's D
0.312635
CLR
0.854838
CSRT
0.456927153642318
Interpretation
Uncertain
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