Gene

KWMTBOMO11512  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA004054

Annotation

PREDICTED:_tetratricopeptide_repeat_protein_19_homolog?_mitochondrial_[Bombyx_mori]

Location

Bomo_Chr19(-):7540257-7541374      View in EpiBrowser

Full name

Tetratricopeptide repeat protein 19 homolog, mitochondrial      

Location in the cell

Cytoplasmic   Reliability : 3.104

CDS

ATGTCAGTAAGGCTTCCTCAACAAAAGATTGGTAGTGTTCCATGTGCTGTCGGATTTTCATTGTTTACATGGCTAGGCTTCTACAAGAAAACAAGTGCTGAAGATGAACTTATACATACCATTAAACATTGTATTCTCTTCATACAGAGGTATGACTACATTAAAGCAGAACAACTATTGCATGTGGCTCTTAGACAAGCCCAACAGATGCAGCATCAGTTAGCAATAACCTATATTTATGATGTTATGGCAAACTTGGCACTTGAAAGAGAACACCTAGATAAGGCTAAAGACCTTTTTGTTGCTGTCACTCAAAGAATCATGGCTGATGGTGCAACTGAAGATGATTTTCGAGTTGTTCATATCAGTACAAAGTTAGCAAGAATAAGTCACCTGAAAAAGGATTATCAAACTGCTCAGATGGGTTATGAGTGGTGCTTAGAGAAACTAGAAAAAATTATCAAAAGCGATCCTTCAGAGGAGAAAATGAAGTTATTTGCACTAGCTGAAGATTGGTATGGACGGCTGTTCCTTGATACTAATCAATATGAACATGCCTTAAAACTTATGACCGACTCACTGGAGAAAATGCAATCCGTTTCAGATATAGAGAAAGAGCACATAGCAACTCAAATGAATGACATTGGTACAGTTTGTGATTTATTAGGTAAAACAGATGAAAGTCTACATTACTTCAAAGAAGCAATTGAAATTGGAAAAAAACTTGAAATGGAGTTAGGTACAATGTATGTGAATTTAGGAAGAGCTTACATAAAGAAAAAATTATTGTCAGAAGCAAGAAAAAATTGTGGACTGGCACTAAAAATTGGGGTCATGTCCAAAAATAAAGATGTTAAAGAGGAAGCTGAAAACTGTTTTCAAGAAATAAAAAGGTTGAATTAG

Protein

MSVRLPQQKIGSVPCAVGFSLFTWLGFYKKTSAEDELIHTIKHCILFIQRYDYIKAEQLLHVALRQAQQMQHQLAITYIYDVMANLALEREHLDKAKDLFVAVTQRIMADGATEDDFRVVHISTKLARISHLKKDYQTAQMGYEWCLEKLEKIIKSDPSEEKMKLFALAEDWYGRLFLDTNQYEHALKLMTDSLEKMQSVSDIEKEHIATQMNDIGTVCDLLGKTDESLHYFKEAIEIGKKLEMELGTMYVNLGRAYIKKKLLSEARKNCGLALKIGVMSKNKDVKEEAENCFQEIKRLN

Description

Required for mitochondrial complex III formation.

Similarity

Belongs to the TTC19 family.

Keywords

Complete proteome   Mitochondrion   Reference proteome   Repeat   TPR repeat   Transit peptide  

Feature

chain  Tetratricopeptide repeat protein 19 homolog, mitochondrial

Uniprot

H9J3G7   A0A2A4JAD2   A0A0L7KJV2   A0A1E1WDC5   A0A2W1BGM7   A0A3S2M6R2   + More
S4NXZ6   A0A194QXL1   A0A194QK31   A0A2H1VQJ5   A0A212EPR8   A0A195FSW7   F4WN50   A0A195DLV4   A0A195BJA3   A0A0J7KS27   A0A158NA86   A0A026WSV9   A0A195CBG9   E2A5Q7   J3JVQ1   T1HY71   B4KE68   A0A2A3E1V5   A0A1A9WWC8   V9IEV0   A0A0A9WQV0   A0A1B6JUB4   A0A151X7P5   A0A1A9XJC3   A0A1W4XBV4   A0A1I8PUC5   A0A2R7WD61   A0A1B6F5X3   A0A1B0FF38   K7IRG7   A0A0N0U6I8   E0VVH8   A0A088AAF0   A0A1A9ZVR3   A0A1W4VXU1   J9JTK7   A0A232F8I3   A0A3B0JYR4   B4PAF6   B4LS18   A0A0A1WVY9   A0A1B0BLP1   Q29N96   B4G827   A0A2S2PGM5   A0A224XUJ9   A0A069DRH9   B3MNR1   B3NMA6   B4JAM0   A0A1Y1MET7   A0A034WPB4   A0A0J9R3V7   Q8SYD0   A0A0K8TMG2   W8BR33   B4I5Q1   A0A1B6EC26   A0A0T6AX58   B4N0Y1   B4Q9F0   A0A0K8U500   A0A1I8N193   A0A1B0GGU5   A0A139WHC1   A0A088AAF1   A0A1B6D5M8   A0A2J7QNI9   A0A2H8TW30   A0A067QS41   A0A0P4VRD4   A0A1B6LAK5   A0A1L8E0L0   A0A2S2R9X8   A0A1S3D4Q3   A0A336LP89   A0A1S4F0I6   Q17JF2   L7M1H1   A0A224Z0N5   A0A131YSF8   A0A0L7RI74   A0A182V8Q1   A0A1E1XC59   A0A182GIS5   A0A182F628   A0A084VNF1   A0A182WUB1   Q7PND9   A0A182H3P5   A0A131XE77   A0A182J605  

Pubmed

19121390    26227816    28756777    23622113    26354079    22118469    + More
21719571    21347285    24508170    30249741    20798317    22516182    17994087    25401762    26823975    20075255    20566863    28648823    17550304    25830018    15632085    26334808    28004739    25348373    22936249    10731132    12537572    12537569    21278747    26369729    24495485    25315136    18362917    19820115    24845553    17510324    25576852    28797301    26830274    28503490    26483478    24438588    12364791    14747013    17210077    28049606   

EMBL

BABH01021400    BABH01021401    BABH01021402    BABH01021403    BABH01021404    BABH01021405    + More
BABH01021406    BABH01021407    NWSH01002390    PCG68400.1    JTDY01009564    KOB63336.1    GDQN01006099    JAT84955.1    KZ150235    PZC71976.1    RSAL01000019    RVE52729.1    GAIX01014000    JAA78560.1    KQ461073    KPJ09695.1    KQ458575    KPJ05734.1    ODYU01003670    SOQ42732.1    AGBW02013432    OWR43451.1    KQ981305    KYN42999.1    GL888235    EGI64319.1    KQ980734    KYN13858.1    KQ976455    KYM85176.1    LBMM01003860    KMQ93044.1    ADTU01010076    KK107131    QOIP01000012    EZA58174.1    RLU15952.1    KQ978009    KYM98147.1    GL437023    EFN71254.1    BT127319    AEE62281.1    ACPB03007951    CH933807    EDW11813.1    KZ288444    PBC25677.1    JR042580    AEY59638.1    GBHO01036384    GBHO01036372    GBHO01000865    GBHO01000862    GBRD01004314    GDHC01006760    JAG07220.1    JAG07232.1    JAG42739.1    JAG42742.1    JAG61507.1    JAQ11869.1    GECU01035006    GECU01032592    GECU01029209    GECU01029008    GECU01011403    GECU01005327    GECU01004909    GECU01004658    JAS72700.1    JAS75114.1    JAS78497.1    JAS78698.1    JAS96303.1    JAT02380.1    JAT02798.1    JAT03049.1    KQ982446    KYQ56344.1    KK854483    PTY16255.1    GECZ01024110    JAS45659.1    CCAG010009466    KQ435727    KOX77971.1    DS235812    EEB17384.1    ABLF02035184    NNAY01000719    OXU26800.1    OUUW01000010    SPP86213.1    CM000158    EDW90364.1    CH940649    EDW63694.1    GBXI01011612    JAD02680.1    JXJN01016521    CH379060    EAL33446.2    CH479180    EDW28507.1    GGMR01015970    MBY28589.1    GFTR01004643    JAW11783.1    GBGD01002374    JAC86515.1    CH902620    EDV31148.1    CH954179    EDV54706.2    CH916368    EDW02806.1    GEZM01033223    JAV84339.1    GAKP01001531    JAC57421.1    CM002910    KMY90927.1    AE014134    AY071630    GDAI01002267    JAI15336.1    GAMC01005043    GAMC01005041    JAC01513.1    CH480822    EDW55707.1    GEDC01001874    JAS35424.1    LJIG01022601    KRT79706.1    CH963920    EDW78143.1    CM000361    EDX05457.1    GDHF01030864    JAI21450.1    AJWK01000755    KQ971343    KYB27187.1    GEDC01016311    JAS20987.1    NEVH01013194    PNF30154.1    GFXV01006652    MBW18457.1    KK853366    KDR08095.1    GDRN01104120    GDRN01104119    JAI57967.1    GEBQ01019326    JAT20651.1    GFDF01002049    JAV12035.1    GGMS01017570    MBY86773.1    UFQT01000037    SSX18369.1    CH477232    EAT46888.1    GACK01007129    JAA57905.1    GFPF01012280    MAA23426.1    GEDV01007716    JAP80841.1    KQ414585    KOC70529.1    GFAC01002522    JAT96666.1    JXUM01012160    KQ560347    KXJ82916.1    ATLV01014738    KE524984    KFB39495.1    AAAB01008964    EAA12340.5    JXUM01024539    KQ560693    KXJ81251.1    GEFH01003919    JAP64662.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000283053    UP000053240    UP000053268    + More
UP000007151    UP000078541    UP000007755    UP000078492    UP000078540    UP000036403    UP000005205    UP000053097    UP000279307    UP000078542    UP000000311    UP000015103    UP000009192    UP000242457    UP000091820    UP000075809    UP000092443    UP000192223    UP000095300    UP000092444    UP000002358    UP000053105    UP000009046    UP000005203    UP000092445    UP000192221    UP000007819    UP000215335    UP000268350    UP000002282    UP000008792    UP000092460    UP000001819    UP000008744    UP000007801    UP000008711    UP000001070    UP000000803    UP000001292    UP000007798    UP000000304    UP000095301    UP000092461    UP000007266    UP000235965    UP000027135    UP000079169    UP000008820    UP000053825    UP000075903    UP000069940    UP000249989    UP000069272    UP000030765    UP000076407    UP000007062    UP000075880   

PRIDE

H9J3G7    Q8SYD0   

Pfam

PF13181   TPR_8        + More
PF17874   TPR_MalT
PF15136   UPF0449
PF01266   DAO
PF12862   ANAPC5
PF16089   DUF4818

Interpro

IPR019734   TPR_repeat        + More
IPR029058   AB_hydrolase       
IPR026151   Maspardin       
IPR011990   TPR-like_helical_dom_sf       
IPR040395   TTC19       
IPR013026   TPR-contain_dom       
IPR041617   TPR_MalT       
IPR028227   UPF0449       
IPR036188   FAD/NAD-bd_sf       
IPR006076   FAD-dep_OxRdtase       
IPR026000   Apc5_dom       
IPR032145   DUF4818       

SUPFAM

SSF48452   SSF48452        + More
SSF53474   SSF53474       
SSF51905   SSF51905       

Gene 3D

1.25.40.10     3.40.50.1820     3.50.50.60    

ProteinModelPortal

H9J3G7   A0A2A4JAD2   A0A0L7KJV2   A0A1E1WDC5   A0A2W1BGM7   A0A3S2M6R2   + More
S4NXZ6   A0A194QXL1   A0A194QK31   A0A2H1VQJ5   A0A212EPR8   A0A195FSW7   F4WN50   A0A195DLV4   A0A195BJA3   A0A0J7KS27   A0A158NA86   A0A026WSV9   A0A195CBG9   E2A5Q7   J3JVQ1   T1HY71   B4KE68   A0A2A3E1V5   A0A1A9WWC8   V9IEV0   A0A0A9WQV0   A0A1B6JUB4   A0A151X7P5   A0A1A9XJC3   A0A1W4XBV4   A0A1I8PUC5   A0A2R7WD61   A0A1B6F5X3   A0A1B0FF38   K7IRG7   A0A0N0U6I8   E0VVH8   A0A088AAF0   A0A1A9ZVR3   A0A1W4VXU1   J9JTK7   A0A232F8I3   A0A3B0JYR4   B4PAF6   B4LS18   A0A0A1WVY9   A0A1B0BLP1   Q29N96   B4G827   A0A2S2PGM5   A0A224XUJ9   A0A069DRH9   B3MNR1   B3NMA6   B4JAM0   A0A1Y1MET7   A0A034WPB4   A0A0J9R3V7   Q8SYD0   A0A0K8TMG2   W8BR33   B4I5Q1   A0A1B6EC26   A0A0T6AX58   B4N0Y1   B4Q9F0   A0A0K8U500   A0A1I8N193   A0A1B0GGU5   A0A139WHC1   A0A088AAF1   A0A1B6D5M8   A0A2J7QNI9   A0A2H8TW30   A0A067QS41   A0A0P4VRD4   A0A1B6LAK5   A0A1L8E0L0   A0A2S2R9X8   A0A1S3D4Q3   A0A336LP89   A0A1S4F0I6   Q17JF2   L7M1H1   A0A224Z0N5   A0A131YSF8   A0A0L7RI74   A0A182V8Q1   A0A1E1XC59   A0A182GIS5   A0A182F628   A0A084VNF1   A0A182WUB1   Q7PND9   A0A182H3P5   A0A131XE77   A0A182J605  

PDB

5O01     E-value=0.00328251,     Score=94

KEGG

101743207    K18169 tetratricopeptide repeat protein 19, mitochondrial | (RefSeq) tetratricopeptide repeat protei

GO

GO:0016021   GO:0071632   GO:0034551   GO:0007630   GO:0005739   GO:0016570   GO:0006355   GO:0016491   GO:0005743   GO:0005515   GO:0006457   GO:0000413   GO:0016020   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

PANTHER

PTHR15913   PTHR13143  

Subcellular location

Mitochondrion  

Length:

300

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

3.26366

Exp number, first 60 AAs:

3.25104

Total prob of N-in:

0.07844

outside

1  -  300

 

 

Pi

145.131813

Theta

187.682209

Tajima's D

-0.713439

CLR

557.242068

CSRT

0.196190190490475

Interpretation

Uncertain