SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11510
Pre Gene Modal
BGIBMGA004055
Annotation
PREDICTED:_LOW_QUALITY_PROTEIN:_serine/threonine-protein_kinase_PRP4_homolog_[Bombyx_mori]
Location
Bomo_Chr19(-):7530154-7532904      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.053
 

Sequence

CDS
ATGGCTGATAAGAAGCCTAAAAGAAATTCTTCCAAATATTTTTATTATGATGAACAGAAAGCAAAAAGAAGAAAACAAAAATCTCGAATAAGATCTCAAACTCCACCATTACCTCACAGAAGTGGGACTAGTACTGAAGAACTTTTGCTAAAAAGAGATTCTCTAAAGAAGCAGCTGCAAAAGTTTAAGCACATTTCTAGAAATGGTGGTAATCAACATACTGAGGAAAATAGGAAACGAAAATACACAGAGGGAAAAGATGGTAAACAAAAAAGATATAGTGAAGATAAAAGCAAAAATAGTCATGGTCAACAATCAAAAAGTGCTCCATCAAAATCAAATATAGAAATTGCATCAGAGTCTGAAGACGAAGAAAGTATAATTGAAAAAAGAAGGATACAAAGGAAACAATTGTTAAAAAAATTTAATCAATCACATGATGATAACCATTCAAAAAATACTGAGAGTATTATAGAAAAGAATAATGGGGGTAATGATCAAAAGCTCACTGATGTAAACCCAACTTCTGCTGGAGAGACTGATGATTTCACAGATATGTTTTCTGAGAAAGATGATTTTAAAATTAAAGATCTTCTTAAAGTGGACAAAAATGATTTTACAAATAATTCAACTCTGACTGATAATTGGGATGACCACGAAGGATACTATAAAATAAGAGTTGGTGATGTTGTCAACAACAGATTCACAATAAAAGATACATTAGGACAAGGTGTGTTTGCCAATGTAGTGCGTGCTCAAGATAATGGTCAAGGAAACAACTATGTAGCAATAAAAATAATTAGAAACAATGAGTTGATGTACAAAACTGGCTTAAAAGAGATTTCTATATTAAAAGAAGTCAATGAGGCGGATCCAGAAAATAAATATCATTGTGTGCAATTTTTAGGGCACTTCATGCACAAAGGACATCTCTGTTTAGTTTTAGAATCCTTACATATTGATTTGCGATGTGTACTTAAAAAATATGGTAAAAATCATGGTTTAAACATGAAAGCCATTATTAGTTACAGCAGGCAATTACTCTTGGCATTGAGATTACTGAAGAAAGTTGGGATTGTGCATGCAGATATAAAGCCTGATAATATTTTAGTGAATGAAAGGAAGAATATCCTAAAGTTGTGCGATTTTGGTTCTGCTGCAAAAATTGATGAAAATGAACCAACACCATACTTGGTGTCAAGGTATTATAGAGCTCCAGAAATAATTTTAGGGATTCCTTACAAACATGGTGTTGATTTATGGTCTTCGGCTTGTACAATTTATGAAATGACGACAGGAAAAATCCTCTTCACTGGAAGCTCCAACAACAAAATGCTCAAATGTTTTATGGACTTAAAAGGCAAAATACCAAACAAATTAATTAGAAAAGGCAAATTTAAAGATCAACATTTTAATTATAATTATAATTTTTTACTCCACAAAAAGGACGAATTTACTGGTAGAGATAAATTAGTTGAGGTGACAAATATCAATGCAAATAGAGATTTGAATAACGAATTGCGAAATTGTTGTAAAAATATGACAGACAAGGAAGAAAGGAAAATGACACAGCTAAAGGATTTGTTAGACAAAATGCTAACACTGGACTCTAGTCAACGATATTCAGTAGCAGATTGTTTGAAGCATCCATTTGTTCAAGATGTTTTAACAAAGTAG
Protein
MADKKPKRNSSKYFYYDEQKAKRRKQKSRIRSQTPPLPHRSGTSTEELLLKRDSLKKQLQKFKHISRNGGNQHTEENRKRKYTEGKDGKQKRYSEDKSKNSHGQQSKSAPSKSNIEIASESEDEESIIEKRRIQRKQLLKKFNQSHDDNHSKNTESIIEKNNGGNDQKLTDVNPTSAGETDDFTDMFSEKDDFKIKDLLKVDKNDFTNNSTLTDNWDDHEGYYKIRVGDVVNNRFTIKDTLGQGVFANVVRAQDNGQGNNYVAIKIIRNNELMYKTGLKEISILKEVNEADPENKYHCVQFLGHFMHKGHLCLVLESLHIDLRCVLKKYGKNHGLNMKAIISYSRQLLLALRLLKKVGIVHADIKPDNILVNERKNILKLCDFGSAAKIDENEPTPYLVSRYYRAPEIILGIPYKHGVDLWSSACTIYEMTTGKILFTGSSNNKMLKCFMDLKGKIPNKLIRKGKFKDQHFNYNYNFLLHKKDEFTGRDKLVEVTNINANRDLNNELRNCCKNMTDKEERKMTQLKDLLDKMLTLDSSQRYSVADCLKHPFVQDVLTK

Summary

Uniprot
A0A2A4J8J0   A0A2A4J9G2   A0A2A4J8F1   A0A2W1BA05   A0A2H1VPH7   A0A194QVY7   + More
A0A194QQC8   A0A212F9Q5   A0A1B0GI03   A0A1I8M2L5   A0A1I8M2L6   T1PK18   U5EVH0   W8BTR8   N6TH82   A0A154PJN8   A0A3B0KK86   A0A0M4EGM0   A0A0C9RPJ4  
Pubmed
28756777    26354079    22118469    25315136    24495485    23537049    + More
EMBL
NWSH01002390    PCG68395.1    PCG68396.1    PCG68397.1    KZ150235    PZC71978.1    + More
ODYU01003670    SOQ42730.1    KQ461073    KPJ09698.1    KQ458575    KPJ05731.1    AGBW02009564    OWR50475.1    AJWK01010545    AJWK01010546    KA649014    AFP63643.1    GANO01003408    JAB56463.1    GAMC01006195    GAMC01006192    JAC00364.1    APGK01038392    KB740954    KB632338    ENN77103.1    ERL92907.1    KQ434938    KZC12079.1    OUUW01000012    SPP86939.1    CP012525    ALC43590.1    GBYB01010365    JAG80132.1   
Proteomes
UP000218220    UP000053240    UP000053268    UP000007151    UP000092461    UP000095301    + More
UP000019118    UP000030742    UP000076502    UP000268350    UP000092553   
Pfam
PF00069   Pkinase
Interpro
IPR017441   Protein_kinase_ATP_BS        + More
IPR008271   Ser/Thr_kinase_AS       
IPR011009   Kinase-like_dom_sf       
IPR000719   Prot_kinase_dom       
SUPFAM
SSF56112   SSF56112       
ProteinModelPortal
A0A2A4J8J0   A0A2A4J9G2   A0A2A4J8F1   A0A2W1BA05   A0A2H1VPH7   A0A194QVY7   + More
A0A194QQC8   A0A212F9Q5   A0A1B0GI03   A0A1I8M2L5   A0A1I8M2L6   T1PK18   U5EVH0   W8BTR8   N6TH82   A0A154PJN8   A0A3B0KK86   A0A0M4EGM0   A0A0C9RPJ4  
PDB
4IJP     E-value=4.90119e-102,     Score=949

Ontologies

KEGG
101742920    K08827 serine/threonine-protein kinase PRP4 [EC:2.7.11.1] | (RefSeq) serine/threonine-protein kinase
GO
GO:0005524   GO:0004672   GO:0006468   GO:0016020   GO:0016021   GO:0004888   GO:0007166   GO:0003707   GO:0006418   GO:0003824  

Topology

Length:
558
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.01024
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00751
outside
1  -  558
 
 

Population Genetic Test Statistics

Pi
176.020121
Theta
231.161314
Tajima's D
-0.473364
CLR
0.639181
CSRT
0.248937553122344
Interpretation
Uncertain
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