Silkworm Genome Informatics Database

Gene

KWMTBOMO11491

Pre Gene Modal

BGIBMGA001914

Annotation

PREDICTED:_uncharacterized_protein_LOC106132699_[Amyelois_transitella]

Location

Bomo_Chr19(-):6895601-6899326 View in EpiBrowser

Location in the cell

PlasmaMembrane Reliability : 4.904

CDS

ATGATGCCGCCCCCACCGCCTCCTCCGCTGCCGGCAGATCCAGTTCATATCGAAGCCAATATCCAACAAACGGCTCAAAGACAAGAAATCAATGTAGCCATGATCGTACTAAATGTCGTGAATACTGTGACACACGTCCTGATAGGCGCGGTGGCGCTCAGCGCATTCATATTCGCCAATGTCTTCCACGGCACGAACAATCTAAAGCAGCACATTTATTTGTGCGTTACAGGGTACGTGATCTTAATGTCTCAAGCGATATTGACCTTCAGTCCGAACAATGGTTGGACTAATTCTTTAAAGTATCCGAATAAGAAAATGGTGCACTGGGTGATGCAAGTTTCTGGGTCTATACTTGCAATTGCTGGCAGCATCATAAGGTTTACCAACTTGAATGAACATATGCAGACTGCTCACGGTATTCTAGGTCTCATCGCCTTAATCTTGACTGTGATAAGTCTCATTGGAGGAGTTGTGAACTTGATATTCCCTAAACAAACGTCCGCATTAATATTGAGAAGTCTTCACGCTTGTTTTGGCTTGTTGACCGTGTCAGTAGCTTTTATTTGTTTATGTCTCGGTTTTGATACGATCTACAGGATAGTTATGGGTGACGTGAATGCAAATCTGTCTATCGCATTTACAGTAATGGCGTTAATCGGTGTTCTATCCTCTGCGGTATCAAATTTAACTAGGAGGTATATGAAACGTTAG

Protein

MMPPPPPPPLPADPVHIEANIQQTAQRQEINVAMIVLNVVNTVTHVLIGAVALSAFIFANVFHGTNNLKQHIYLCVTGYVILMSQAILTFSPNNGWTNSLKYPNKKMVHWVMQVSGSILAIAGSIIRFTNLNEHMQTAHGILGLIALILTVISLIGGVVNLIFPKQTSALILRSLHACFGLLTVSVAFICLCLGFDTIYRIVMGDVNANLSIAFTVMALIGVLSSAVSNLTRRYMKR

Uniprot

H9IXD1 A0A2W1BVU9 A0A2A4JQ72 A0A2A4K6S9 A0A0L7KNM7 A0A2W1BVT3 + More
A0A1J1J236 A0A1W4VF74 A0A2H1W4A5 A0A0A1WFL0 A0A1B0CLI6 B3MN50 A0A0L0BRU3 A0A1B0CX08 A0A2A4K6B6 B4JPE1 B4GKH7 B4KIA2 Q29PB9 A0A182NP11 A0A0M4ENJ8 A0A0Q9X5N2 A0A0Q9XF60 A0A1A9W6W2 B4M903 A0A1B0AN30

Pubmed

19121390 28756777 26227816 25830018 17994087 18057021 + More
26108605 15632085

EMBL

BABH01017967 KZ149920 PZC77754.1 NWSH01000789 PCG74187.1 NWSH01000085 + More
PCG79779.1 JTDY01007869 KOB64897.1 PZC77755.1 CVRI01000066 CRL06392.1 ODYU01006251 SOQ47920.1 GBXI01017032 GBXI01002644 JAC97259.1 JAD11648.1 AJWK01017317 CH902620 EDV32028.1 KPU73738.1 KPU73739.1 JRES01001455 KNC22746.1 AJWK01033098 PCG79781.1 CH916372 EDV98771.1 CH479184 EDW37143.1 CH933807 EDW12395.1 CH379058 EAL34374.2 CP012523 ALC38020.1 KRG03229.1 KRG03230.1 CH940654 EDW57679.1 JXJN01000695

Proteomes

UP000005204 UP000218220 UP000037510 UP000183832 UP000192221 UP000092461 + More
UP000007801 UP000037069 UP000001070 UP000008744 UP000009192 UP000001819 UP000075884 UP000092553 UP000091820 UP000008792 UP000092460

PRIDE

H9IXD1

Pfam

PF03188 Cytochrom_B561

Interpro

IPR006593 Cyt_b561/ferric_Rdtase_TM + More
IPR036259 MFS_trans_sf

SUPFAM

SSF103473 SSF103473

ProteinModelPortal

H9IXD1 A0A2W1BVU9 A0A2A4JQ72 A0A2A4K6S9 A0A0L7KNM7 A0A2W1BVT3 + More
A0A1J1J236 A0A1W4VF74 A0A2H1W4A5 A0A0A1WFL0 A0A1B0CLI6 B3MN50 A0A0L0BRU3 A0A1B0CX08 A0A2A4K6B6 B4JPE1 B4GKH7 B4KIA2 Q29PB9 A0A182NP11 A0A0M4ENJ8 A0A0Q9X5N2 A0A0Q9XF60 A0A1A9W6W2 B4M903 A0A1B0AN30

KEGG

101742282 K08371 cytochrome b-561 domain containing protein 2 | (RefSeq) cytochrome b561 domain-containing pro

GO

GO:0016021 GO:0055114

Length:

237

Number of predicted TMHs:

6

Exp number of AAs in TMHs:

127.3282

Exp number, first 60 AAs:

19.87566

Total prob of N-in:

0.12654

POSSIBLE N-term signal

sequence

inside

1 - 34

TMhelix

35 - 57

outside

58 - 71

TMhelix

72 - 94

inside

95 - 106

TMhelix

107 - 126

outside

127 - 140

TMhelix

141 - 163

inside

164 - 175

TMhelix

176 - 198

outside

199 - 207

TMhelix

208 - 230

inside

231 - 237

Pi

37.370886

Theta

41.110816

Tajima's D

-1.442078

CLR

267.642625

CSRT

0.0686465676716164

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics