Gene

KWMTBOMO11488

Annotation

endonuclease-reverse_transcriptase_[Bombyx_mori]

Location

Bomo_Chr19(-):6807612-6808046      View in EpiBrowser

Location in the cell

Mitochondrial   Reliability : 3.12

CDS

ATGTCAATTCTCGAGGAGCTAAACGTCAAGACCCGTCTATCTACAATCTGCATGCAGCGTCTCCTCAAGTACTTCGGACACGTGGCCCGACAAAATCCCGAGAACTTGGAAAAATTAATAGTTGTAGGTCACGTGGAAGGAAAGAGAAGTCGAGGAAGATTGCCAACCAGGTGGACGGACATTATCAAGGAGGCCACAAACACCAGCGTCCCGGGCGCCATTAAGCAGGCCGAATGCAGGCAGCATTGGAGGAAGCTGGTGCAAAAACTGGACCAAGGTGGTCACGACCCTCAGCAATGA

Protein

MSILEELNVKTRLSTICMQRLLKYFGHVARQNPENLEKLIVVGHVEGKRSRGRLPTRWTDIIKEATNTSVPGAIKQAECRQHWRKLVQKLDQGGHDPQQ

Similarity

Belongs to the UDP-glycosyltransferase family.

Uniprot

D7F174   A0A3S2L0R7   A0A2W1B3R1   D7F163   A0A2H1VU13   D7F161   + More
A0A2H1VNK5   S4NYG9   A0A2H1V742   D7F162   A0A194PHS9   A0A2H1V166   D5LB39   A0A2W1BHL0   D7F167   D7F172   A0A2W1BLZ6   A0A194RGK0   D7F175   A0A0N1I2R8   A0A2H1W7G4   A0A0N1I9B3   A0A2W1BGD9   A0A2G8KTJ4   A0A2G8K796   A0A2G8K327   A0A2G8LJK7   A0A2G8JE23   A0A0J7JU58   A0A212F3L8   W4YPU3   W4YL96   A0A0N1IJY3   A0A194RMQ2   A0A085LQT4   W4Z831   W4Y921   H2YWZ6   H2YWZ5   H3B235   W4ZJA4   A0A2G8K183   W4XDC7   A0A085NJW9   A0A2G8JVA1   X1D4L4   A0A085LZ21   A0A2G8JVI4   A0A2G8L6P4   W4ZFR8   H3J832   W4Y8R9   A0A3S3RLW1   W4XFH1   W4Z5A1   W4YTD8   A0A3S3NR17   A0A3S1AZH6   H3B2Y3   H3AF06   A0A3S0ZE77   A0A212FJU1   A0A194R601   W4XV24   W4XXI5   A0A194RF04   A0A3S1AYP8   A0A2S2QAF2   A0A3S1AY56   A0A3S1I3C2   A0A016SZZ3   A0A3S1HJZ0   A0A183F5Q6   A0A3P7TFN0   A0A2H1V1U0   W5NMM5   W6NHB7   A0A0B7BUS3   A0A151IIH7  

Pubmed

20470440    28756777    23622113    26354079    29023486    22118469    + More
24929829    9215903    24624126    25730766   

EMBL

FJ265559    ADI61827.1    RSAL01000289    RVE42931.1    KZ150366    PZC71172.1    + More
FJ265548    ADI61816.1    ODYU01004401    SOQ44236.1    FJ265546    ADI61814.1    ODYU01003523    SOQ42419.1    GAIX01008594    JAA83966.1    ODYU01001007    SOQ36619.1    FJ265547    ADI61815.1    KQ459603    KPI92872.1    ODYU01000171    SOQ34496.1    GU815090    ADF18553.1    KZ150087    PZC73751.1    FJ265552    ADI61820.1    FJ265557    ADI61825.1    KZ150088    PZC73730.1    KQ460211    KPJ16569.1    FJ265560    ADI61828.1    KQ459547    KPJ00048.1    ODYU01006805    SOQ48998.1    KQ460601    KPJ13798.1    KZ150203    PZC72267.1    MRZV01000378    PIK51329.1    MRZV01000817    PIK43880.1    MRZV01000940    PIK42365.1    MRZV01000056    PIK60437.1    MRZV01002322    PIK33998.1    LBMM01032604    KMQ81702.1    AGBW02010540    OWR48330.1    AAGJ04055194    AAGJ04073865    LADJ01058192    KPJ21589.1    KQ459984    KPJ19108.1    KL363331    KFD47330.1    AAGJ04154883    AAGJ04161766    AFYH01085122    AAGJ04021158    MRZV01000994    PIK41715.1    AAGJ04093240    KL367493    KFD69765.1    MRZV01001216    PIK39650.1    BART01031562    GAH15691.1    KL363256    KL367985    KFD50217.1    KFD59415.1    MRZV01001207    PIK39730.1    MRZV01000196    PIK55924.1    AAGJ04055057    AAGJ04021346    NCKU01008836    RWS01655.1    AAGJ04075245    AAGJ04128321    AAGJ04110738    NCKU01012182    RWS00163.1    RQTK01000685    RUS76136.1    AFYH01119920    AFYH01227396    RQTK01000625    RUS76894.1    AGBW02008213    OWR54001.1    KQ460644    KPJ13248.1    AAGJ04068581    AAGJ04149053    KQ460297    KPJ16162.1    RQTK01001364    RUS70632.1    GGMS01004979    MBY74182.1    RQTK01001448    RUS70261.1    RQTK01000011    RUS91450.1    JARK01001491    EYB95904.1    RQTK01000360    RUS81011.1    UZAH01001657    VDO19881.1    ODYU01000306    SOQ34818.1    AHAT01022938    CAVP010061241    CDL96703.1    HACG01049256    CEK96121.1    KQ977522    KYN02133.1   

Proteomes

UP000283053    UP000053268    UP000053240    UP000230750    UP000036403    UP000007151    + More
UP000007110    UP000007875    UP000008672    UP000285301    UP000271974    UP000024635    UP000050761    UP000018468    UP000025227    UP000078542   

PRIDE

D7F174    D7F163    D7F161    D7F162    D5LB39    D7F167    + More
D7F172    D7F175   

Pfam

PF00078   RVT_1        + More
PF14529   Exo_endo_phos_2
PF08320   PIG-X
PF00201   UDPGT
PF05699   Dimer_Tnp_hAT
PF00498   FHA
PF07690   MFS_1

Interpro

IPR000477   RT_dom        + More
IPR005135   Endo/exonuclease/phosphatase       
IPR036691   Endo/exonu/phosph_ase_sf       
IPR027124   Swc5/CFDP2       
IPR013233   PIG-X/PBN1       
IPR040039   PIGX       
IPR002213   UDP_glucos_trans       
IPR035595   UDP_glycos_trans_CS       
IPR008906   HATC_C_dom       
IPR000253   FHA_dom       
IPR008984   SMAD_FHA_dom_sf       
IPR036259   MFS_trans_sf       
IPR020846   MFS_dom       
IPR011701   MFS       
IPR036734   Neur_chan_lig-bd_sf       

SUPFAM

SSF56219   SSF56219        + More
SSF49879   SSF49879       
SSF103473   SSF103473       
SSF63712   SSF63712       

Gene 3D

3.60.10.10     2.70.170.10    

CDD

cd00060  FHA
cd06174  MFS

ProteinModelPortal

D7F174   A0A3S2L0R7   A0A2W1B3R1   D7F163   A0A2H1VU13   D7F161   + More
A0A2H1VNK5   S4NYG9   A0A2H1V742   D7F162   A0A194PHS9   A0A2H1V166   D5LB39   A0A2W1BHL0   D7F167   D7F172   A0A2W1BLZ6   A0A194RGK0   D7F175   A0A0N1I2R8   A0A2H1W7G4   A0A0N1I9B3   A0A2W1BGD9   A0A2G8KTJ4   A0A2G8K796   A0A2G8K327   A0A2G8LJK7   A0A2G8JE23   A0A0J7JU58   A0A212F3L8   W4YPU3   W4YL96   A0A0N1IJY3   A0A194RMQ2   A0A085LQT4   W4Z831   W4Y921   H2YWZ6   H2YWZ5   H3B235   W4ZJA4   A0A2G8K183   W4XDC7   A0A085NJW9   A0A2G8JVA1   X1D4L4   A0A085LZ21   A0A2G8JVI4   A0A2G8L6P4   W4ZFR8   H3J832   W4Y8R9   A0A3S3RLW1   W4XFH1   W4Z5A1   W4YTD8   A0A3S3NR17   A0A3S1AZH6   H3B2Y3   H3AF06   A0A3S0ZE77   A0A212FJU1   A0A194R601   W4XV24   W4XXI5   A0A194RF04   A0A3S1AYP8   A0A2S2QAF2   A0A3S1AY56   A0A3S1I3C2   A0A016SZZ3   A0A3S1HJZ0   A0A183F5Q6   A0A3P7TFN0   A0A2H1V1U0   W5NMM5   W6NHB7   A0A0B7BUS3   A0A151IIH7  

KEGG

101740752    no KO assigned | (RefSeq) aldo-keto reductase AKR2E4-like

GO

GO:0003964   GO:0004519   GO:0016021   GO:0005789   GO:0006506   GO:0016758   GO:0046983   GO:0008028   GO:0015718   GO:0005887  

PANTHER

PTHR23227   PTHR28650  

Length:

99

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00017

Exp number, first 60 AAs:

0.00017

Total prob of N-in:

0.13001

outside

1  -  99

 

 

Pi

291.639168

Theta

197.737254

Tajima's D

1.494703

CLR

0.032816

CSRT

0.784810759462027

Interpretation

Uncertain