Silkworm Genome Informatics Database

Gene

KWMTBOMO11475

Annotation

PREDICTED:_uncharacterized_protein_LOC106721395_[Papilio_machaon]

Location

Bomo_Chr19(+):6607067-6611885 View in EpiBrowser

Location in the cell

Cytoplasmic Reliability : 1.075 Nuclear Reliability : 1.418

CDS

ATGTATTTTAGACCATTAGCATACCATTTTCAAATCTATAACATAGATGAAACTGGCACTCGGACCTCGACAAATGAACCACCCATAGTTCTTTCAGTTAAAGTTAAGAAGGAAGTTGTAGTTATTTCCAGCAATGAACGTGGACAAACTACGACCGTCGTGAGTTGCTGCAACGCTTCTGGATCATTCGTTCCGATGGGTACACGTAAACGAAAGATTCAAAAGTCTAAGGTGTAA

Protein

MYFRPLAYHFQIYNIDETGTRTSTNEPPIVLSVKVKKEVVVISSNERGQTTTVVSCCNASGSFVPMGTRKRKIQKSKV

Uniprot

A0A2A4JLU0 A0A2A4J0W1 J9KKA5 J9KHJ8 A0A2H1VWF9 X1WX11 + More
A0A2H1V5F2 E9JC26 A0A0A9WQ42 A0A1Y1K545 A0A3S2LZB6

Pubmed

21282665 25401762 28004739

EMBL

NWSH01001026 PCG73045.1 NWSH01004485 PCG65052.1 ABLF02006839 ABLF02011868 + More
ABLF02011869 ODYU01004859 SOQ45169.1 ABLF02062637 ODYU01000769 SOQ36063.1 GL771684 EFZ09627.1 GBHO01036629 JAG06975.1 GEZM01092606 JAV56523.1 RSAL01000102 RVE47494.1

Proteomes

UP000218220 UP000007819 UP000283053

Pfam

PF03184   DDE_1        + More
PF05225   HTH_psq
PF03221   HTH_Tnp_Tc5

Interpro

IPR004875   DDE_SF_endonuclease_dom        + More
IPR013083   Znf_RING/FYVE/PHD
IPR036880   Kunitz_BPTI_sf
IPR009057   Homeobox-like_sf
IPR011011   Znf_FYVE_PHD
IPR007889   HTH_Psq
IPR001965   Znf_PHD
IPR019786   Zinc_finger_PHD-type_CS
IPR006600   HTH_CenpB_DNA-bd_dom

SUPFAM

SSF46689   SSF46689        + More
SSF57362   SSF57362
SSF57903   SSF57903

Gene 3D

3.30.40.10

ProteinModelPortal

A0A2A4JLU0 A0A2A4J0W1 J9KKA5 J9KHJ8 A0A2H1VWF9 X1WX11 + More
A0A2H1V5F2 E9JC26 A0A0A9WQ42 A0A1Y1K545 A0A3S2LZB6

KEGG

NA

GO

GO:0003676 GO:0003677 GO:0046872 GO:0004867

Length:

78

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0506

Exp number, first 60 AAs:

0.03198

Total prob of N-in:

0.25437

outside

1 - 78

Pi

257.560863

Theta

179.889024

Tajima's D

1.125318

CLR

0.443789

CSRT

0.694165291735413

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics

Multiple alignment of Orthologues

Gene Tree