SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11473
Pre Gene Modal
BGIBMGA001900
Annotation
PREDICTED:_uncharacterized_protein_LOC105842602_[Bombyx_mori]
Location
Bomo_Chr19(+):6591697-6595680      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 4.415
 

Sequence

CDS
ATGCAGTCTTTGCCGAATGCAATGAGACAGGATGATGGAATGATCAAGAAAAATCCACTATTAAGCAACACGTACACAGATCACAAAGGTTTTATTAGTGACGCCAGCAATATATCGGATTCTGATGATTTTGGTGATAGCAGTGTTATGAGTGATGACAACCTGTATCATAACCAAACAACATCAGCTCTCATCCACCAACATCGAGAATTCAAAATTAACCGTGATAACCCTGAACTATCGCATCGTGATGATTCCGGAATCGAAAGATTACCAGACGAGCACGTGTCCATTGTCGAAACCACGGACGATAGAGAGATAATGCGACCAGTTGGCACAACGCGTAGGAAGCTGTATTTCAACCCGGCTTATTTCGAACCTCAACTAATGGCTGAACCTCCAGAAGCAGCTTTAGAATTTTTAACGAAAATACGAGAAGTAATATCTATAGCAAAACATAAGATGGCAACTAAAAGATTTCAACCCGTTCTCAATGAAATACCAGAAGAAGAAACTTACTCGTCAAGTGGAAACAACTTAGATTTATATCAACGTTTGGGAAGTCAAAAAAGTGACAGCGTATTTAGTTTGAAACGAGACAATAGCAGACGAAAAGATTGTATTGGATGTCCCGGGTGCCAATCGGGAAATTCAAATGATATGCAGTATTTTGTGAAACACAATCTCCCGTCTTGTTCTAACTGTTTAGGGAATAAAGGAGATAAACAGATCAGTATCAGAAAATGGTTGGAGGATATACCACCAGCTAAGCAATCAGATGGTGAATTCTTAAGATTAGCCGAACAACATGGCGTTGTTAATTCTATGATGTCCTTACCACCACTAACAGAGAACAGAGTTCCCAAAATACGCAAGCAACACAGCTTTACAACATCGAGTTCTATGAACAACGGGGATGACTTTTACGTGCCCAAAAATTCTGGTACAATGTCAATAAGATCCGAACCAGGTGTTCGGAATCATAATTTGCCATTGCCTGAATTTGATAATATAACCTATTCTCGATATGGACAAAACATTGCGGAAGTTAATGATATGAACGCATTAGATGTAGAACATTACTTTTCAGGTATTCCGAGAAAAATTGACTATATACCTAAAAATAATAATGTTTTACCTGACATGATAAATGAGGCTGTAGCTTTAGATAGTTCTAAAGCTTACAATGAAGCAAGTAGCTCAGACGATGAGAAACTTAATGGTAATATATTAGACGAATTAAACGAGGGTAGACATATCGCTTTATTAAATAGACGTAATACAGAGATACCATCAGGAAATGAATATGAAACTGACAGTCTGGAAAGAAATTCCAATAAAAAAGGTGTTGTAACACCAACTGAATATCCAGATGTTCCATCATCCCAAGCTAGTCCAAGTCTAAGCAATGCTTTACCTTTAGAAGAAGAGCTTACGATGCGCAATGCGATATACAAAATTAATTCGAGTAGCAATAGTAATACCCCATCACCTCATCACGACATTACTTTGCATCCAAATTATTATGAAACTATTCGTCAAACAAACGACAAAAGTAAGTCTTGTAAAATAATAAATCAGGATCATGATTACAGTCTAGTAAGCGAAGTGTATGTAAATAATAATTATAACTTTGGAAGTACACCGACATCTCCAAGTGGATCAGAATGTTCCATGGGAAGTAAGAAACTTATCCTTACCAATGCTTTACAAGAAAAACCTGGTTGTTTGACAATAGAAGTAAAAGATCCCCCAGAAAATTATATTAAAATTCATGAATCTGATGGCTTCGAACCGGATACATTAGATAGAAAGCATACAAAACACAAAGATTTAATGGATAATGTACAATTTAGTAGGAGAGATTTTATAAAATCTATTGAGAGTATTGAGAATGAGGAAGGTCCTCCACGGCAACGTATAAAATTGAGAAGTAGTGGAACTTTTGTAAAATCTGATGAAAAAGTATTGTCTACAACGAAGTTTCACAGTTTGCGGAACGCATGTGATCAAAGAAAACCTATTCACGACCGACCTAAGCTCTCTGTAACTTCCTTTAGCGGCTCGAAGAGCTTAGACAGTACTACAGATGAAACGTGGGATGAGGCAACAGAATGGAACTCAGACGAAGGACGTATTCTGACTCTAGAATTAAGGCATTCGAAAAGACAACGACAATCCACACCGCCAACTATAAAGCAATTGAAAAATTTAGCAAGACCGGACGTTCTTCCGCCTTTACCCCCCGCGATTGACTACCCAATATACGAACAGCCAATAAGTCCTCCTAGGAAAGTAGAAAATGATAGAATACCTATAGGAGAGTATTCAAAAAACGATAACGGCAGAAGCCTCAATCCGAGGACATTTGAAAAGAATTTAACAACGGACATAGTGGACTGTGATACATCAACGACTCCTGAATCATATCATGGACTGCCATGTGGTCCAATGAGAGCTTCTGTCGAATCACAATCCTCGGAATACGATAACTTTCATGCTCAACCAAATACGACTGGCAATTTTTGCAGAACCTTCACCAAGCGACGTATAGTGGACGCATCCAGTAGTGGATTGAACACTAATACATTCGTGAAGAATGACAAAATCGATAACAAGCCACGGAACAGACAAAAGAAAGGTACAAACGTTCAAGATTCTGGTTACTTGAGTAGTGATTCGACGAATTCAACGCCATTCCAACGAAAGTTAGTTGTAGCAAAAATTGTGAGTTGCAGTGAAAGTGACGATACGGAAAATGAAGCTAGAAGTGAATCCGGGGCTGAAAGTGTAGAAACTCATTCAGTGTTTTTTAACTGTTTTAGAGAGCAAGACATTAATATCGAAAGTACTAGTTATAACGATAGTAGCAAGAGTTCTCAAGACGATTGA
Protein
MQSLPNAMRQDDGMIKKNPLLSNTYTDHKGFISDASNISDSDDFGDSSVMSDDNLYHNQTTSALIHQHREFKINRDNPELSHRDDSGIERLPDEHVSIVETTDDREIMRPVGTTRRKLYFNPAYFEPQLMAEPPEAALEFLTKIREVISIAKHKMATKRFQPVLNEIPEEETYSSSGNNLDLYQRLGSQKSDSVFSLKRDNSRRKDCIGCPGCQSGNSNDMQYFVKHNLPSCSNCLGNKGDKQISIRKWLEDIPPAKQSDGEFLRLAEQHGVVNSMMSLPPLTENRVPKIRKQHSFTTSSSMNNGDDFYVPKNSGTMSIRSEPGVRNHNLPLPEFDNITYSRYGQNIAEVNDMNALDVEHYFSGIPRKIDYIPKNNNVLPDMINEAVALDSSKAYNEASSSDDEKLNGNILDELNEGRHIALLNRRNTEIPSGNEYETDSLERNSNKKGVVTPTEYPDVPSSQASPSLSNALPLEEELTMRNAIYKINSSSNSNTPSPHHDITLHPNYYETIRQTNDKSKSCKIINQDHDYSLVSEVYVNNNYNFGSTPTSPSGSECSMGSKKLILTNALQEKPGCLTIEVKDPPENYIKIHESDGFEPDTLDRKHTKHKDLMDNVQFSRRDFIKSIESIENEEGPPRQRIKLRSSGTFVKSDEKVLSTTKFHSLRNACDQRKPIHDRPKLSVTSFSGSKSLDSTTDETWDEATEWNSDEGRILTLELRHSKRQRQSTPPTIKQLKNLARPDVLPPLPPAIDYPIYEQPISPPRKVENDRIPIGEYSKNDNGRSLNPRTFEKNLTTDIVDCDTSTTPESYHGLPCGPMRASVESQSSEYDNFHAQPNTTGNFCRTFTKRRIVDASSSGLNTNTFVKNDKIDNKPRNRQKKGTNVQDSGYLSSDSTNSTPFQRKLVVAKIVSCSESDDTENEARSESGAESVETHSVFFNCFREQDINIESTSYNDSSKSSQDD

Summary

Uniprot
H9IXB7   A0A2H1VZ63   A0A3S2NDI2   A0A0L7L355   A0A194QJG1   A0A0N1IQF0   + More
A0A0N0PF38   A0A194QW68   A0A212EUL4   A0A0T6AVJ7   A0A139WE28   A0A232F401   K7JNP4  
Pubmed
19121390    26227816    26354079    22118469    18362917    19820115    + More
28648823    20075255   
EMBL
BABH01017987    ODYU01005358    SOQ46119.1    RSAL01000086    RVE48299.1    JTDY01003317    + More
KOB69751.1    KQ458575    KPJ05708.1    LADI01016503    KPJ20813.1    KPJ20814.1    KQ461073    KPJ09722.1    AGBW02012352    OWR45176.1    LJIG01022732    KRT78996.1    KQ971355    KYB26200.1    NNAY01001011    OXU25494.1   
Proteomes
UP000005204    UP000283053    UP000037510    UP000053268    UP000053240    UP000007151    + More
UP000007266    UP000215335    UP000002358   
PRIDE
H9IXB7   
ProteinModelPortal
H9IXB7   A0A2H1VZ63   A0A3S2NDI2   A0A0L7L355   A0A194QJG1   A0A0N1IQF0   + More
A0A0N0PF38   A0A194QW68   A0A212EUL4   A0A0T6AVJ7   A0A139WE28   A0A232F401   K7JNP4  

Ontologies

KEGG
105842602    no KO assigned | (RefSeq) uncharacterized LOC105842602
GO
GO:0016021   GO:0035317   GO:0005938   GO:0035017  

Topology

Length:
963
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00001
outside
1  -  963
 
 

Population Genetic Test Statistics

Pi
260.551767
Theta
185.728021
Tajima's D
0.907551
CLR
0.371687
CSRT
0.639418029098545
Interpretation
Uncertain
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