Gene

KWMTBOMO11470

Annotation

PREDICTED:_piggyBac_transposable_element-derived_protein_4-like_isoform_X3_[Bombyx_mori]

Location

Bomo_Chr19(-):6397849-6401796      View in EpiBrowser

Full name

PiggyBac transposable element-derived protein 4      

Location in the cell

Nuclear   Reliability : 3.383

CDS

ATGGAAAGATTTAACCTTATTGCAATTGAGGATTTGCCCGCTGGGGAACCGATAGAGCAGGCATTGACGGAGCGAAGTAAGCGTTCATGGAACCCCCGAAATTATGAACCTGACGGAGAGGACATTCCAGTAATTTTGTCTTCACCTGCGATTCCGCCATCACCGGCAATGTACGTTGAATGTGGCGGCAGTGGTACGAGCACGCCATCTTCTAGATATAATATACAGATTTCTGTACATGGCAGCCGTAGTCCTTCGCCGTCACATAAACGTGTGCGTCGATCGCTTTGCCCAGACCAAGAACATGATATTACGAACAGAGATTCTATTTCATCGCTACGTCGACCGCTACGAGACTCTGAAATTTGCTACTTGTTGCACTATGGAAGTGACGACGATGACAGCGATGATGAGAGCCAGAATGATAACGACGAAATCGTTCCCATGATTATCCCCCGGGCAGCTGGAATACTGATGGACACTCCGGACGACGAGGAGATTGAGATTGACACGGCGGCGGCAACTAAACCTCTTGTGACATCTTCCTCGCCTTCCATCATTTCAGCACCTACATCACCAGCTCGTGATACCGGTATGAAGCCTAGTCATTTTTTTGAATTTGACTGGGGAACTTTCCCTGACTCTCCTATACCGCCAACAGAAAGGCGTGAATCTTTTAAGGAACACTCTGGTCCCACTGTCGCTGTAAGTGACCCTTACGAGATTTTTAGACTAATTTGGGACCAGGAGTTCATGGAATTTATTGTGCAGGAAACAAATAGATATGCCCAACAATTAGCTGCTGAAATGTTGGACGGCGGGGAATTACAGGCCTCCAGTAGGATTACAGAATGGAAAGAAACCAATGTAGACGAGTTATTGGTGTTCTTCGGAATATTACTGGCGATGGGAATCGTCATAAAGAACCGGGTTGAAGAGTACTGGAATACGGAACAAAACATCTTCTCCACTCCAGGTTTCAAAGTATATATGTCGCTTAGGAGGTTCCAGTTACTCAGCAGGTGCTTACATTTTAATAATTCCGAGAACTTGAGAAACCTCAACCTGGATCCCTCACAGGCAAAGCTTTTTAAAGTGGAGCCTGTGATTAGCCATTTGAATTCCAAGTTCACGGAATTATATATAATGAAGCAGAACATTGCTTTAGATGAATCGCTGCTGCAGTGGAAAGGTTGGTTGAACATCAACCAATTTATTCCAAACAAAGCTGCAGCAGTGGGCATAAAAACTTACGAAATATGTGAGTCGCAGACGGGGTATTTATGGCGATTTAAAATCCATGCCCATAAGGCTTCGCCTACAGTCTCAGAGGCTGATCCATTCACAGCGAGTACACCGGCGTTGGTTCTTAACCTTATCAAAGGTTTAGAACACAAAGGGTACACGTTGTGGATGGATAACTTCTACAATTCCCCAGCACTTGCCCGAAAACTCAAGTCGATTGGGTTTGATTGTGTCGGTACGTTGCGGACAAACCGCAAGTATGTCCCGACGGAACTGACCAATCTGAAAAAATCTCAGATGAAGCCCGGGCAAGTAGTAGGCTATACCAGTGGAGATGTCGATTGCATAATATGGAGAGATCAGAACCGCGTAGCGACGATCTCAACGTACCATGGCAATGCCGTCTCCACTAAAAACGGAGTAACAAAACTTATTTTGATACGTGACTACAACATCTGCATGGGTGGCGTGGATAAAAAAGATCAAATGTTGGCTGCATTCCCAATTGAACGCAAGAGGACACAAATTTGGTACAAGAAATTGTTTAAAAGGTTACTTAATGTTTCTGTGTTGAATGCCTATATCATACATAAACAGACCGCCACGGAGGTCTTGGACCACAGGGGCTTTAGAAAAAACCTGGTAGAATCCCTTTTGCGTAGGCATTCAATGAAAATGCAGCCATATGTCTTTTCTGCCAGGGTACAAGATACCATTTTCGAGGTGAGCCGCCATCACCCCGCCGAATATCCGCGGCTAACTTCATTAAACAGCACAAATCGCCATCGCCACCCATGTAAAGTGTGCGGCAAGCGCACGGTAACGTATTGCGTAGGTTGCGACAAACCTGTGTGCGTATTCACATGTTTTGTGAAACTTCACAATTAA

Protein

MERFNLIAIEDLPAGEPIEQALTERSKRSWNPRNYEPDGEDIPVILSSPAIPPSPAMYVECGGSGTSTPSSRYNIQISVHGSRSPSPSHKRVRRSLCPDQEHDITNRDSISSLRRPLRDSEICYLLHYGSDDDDSDDESQNDNDEIVPMIIPRAAGILMDTPDDEEIEIDTAAATKPLVTSSSPSIISAPTSPARDTGMKPSHFFEFDWGTFPDSPIPPTERRESFKEHSGPTVAVSDPYEIFRLIWDQEFMEFIVQETNRYAQQLAAEMLDGGELQASSRITEWKETNVDELLVFFGILLAMGIVIKNRVEEYWNTEQNIFSTPGFKVYMSLRRFQLLSRCLHFNNSENLRNLNLDPSQAKLFKVEPVISHLNSKFTELYIMKQNIALDESLLQWKGWLNINQFIPNKAAAVGIKTYEICESQTGYLWRFKIHAHKASPTVSEADPFTASTPALVLNLIKGLEHKGYTLWMDNFYNSPALARKLKSIGFDCVGTLRTNRKYVPTELTNLKKSQMKPGQVVGYTSGDVDCIIWRDQNRVATISTYHGNAVSTKNGVTKLILIRDYNICMGGVDKKDQMLAAFPIERKRTQIWYKKLFKRLLNVSVLNAYIIHKQTATEVLDHRGFRKNLVESLLRRHSMKMQPYVFSARVQDTIFEVSRHHPAEYPRLTSLNSTNRHRHPCKVCGKRTVTYCVGCDKPVCVFTCFVKLHN

Keywords

Complete proteome   Reference proteome  

Feature

chain  PiggyBac transposable element-derived protein 4

Uniprot

A0A194RRT0   A0A3S2TBD2   A0A2H1V5F3   A0A3S2LRG0   A0A2W1BDM1   A0A2A4JR95   + More
A0A2J7Q6H1   A0A2W1B9N8   A0A2J7PIK3   A0A2J7QZK8   A0A2A4IYX3   A0A2J7PD69   A0A3S2TTE3   A0A2A4K616   A0A2A4ITI3   A0A2K6S7R1   A0A2J7QSN3   F7FDY8   H9F6U8   G7PAN9   A0A096NT85   G7MWA2   A0A2K5BXT0   A0A2K5XAW3   G3QWT8   A0A2K5KZS5   A0A2K6ALX5   Q96DM1   A0A2K5UF88   A0A1D5R1S0   A0A2K6NHE6   A0A2K6JV20   A0A0D9SEG0   A0A2K5HN84   H2NMQ4   K7DKZ9   A0A3S2NSV7   A0A147BD88   A0A2H1WWX9   A0A3Q0JNJ9   A0A0K0E1W0   A0A147BEZ3   A0A1B6H7X0   A0A1E1WHA1   A0A1B6E873   A0A1B6KKZ3   H9J3V8   A0A2J7Q4C7   J9LP86   A0A2J7QF67   A0A2J7PE40   A0A2J7PDJ3   A0A2J7QV92   A0A2J7RQM3   A0A2J7PXL3   A0A2J7PIT0   A0A2J7PLH5   A0A2J7RD45  

Pubmed

26354079    28756777    25319552    22002653    22398555    14702039    + More
16572171    17431167    25362486    16136131    29652888    19121390   

EMBL

KQ459989    KPJ18766.1    RSAL01001012    RVE40990.1    ODYU01000749    SOQ36006.1    + More
RSAL01000024    RVE52239.1    KZ150113    PZC73302.1    NWSH01000726    PCG74565.1    NEVH01017475    NEVH01002684    NEVH01001351    PNF24176.1    PNF41738.1    PNF42927.1    KZ150197    PZC72319.1    NEVH01026401    NEVH01025126    NEVH01020854    NEVH01013255    NEVH01000629    PNF14193.1    PNF16176.1    PNF21085.1    PNF29260.1    PNF43158.1    NEVH01009069    PNF34004.1    NWSH01005160    PCG64390.1    NEVH01026393    PNF14286.1    RSAL01000003    RVE54733.1    NWSH01000091    PCG79681.1    NWSH01008683    PCG62453.1    NEVH01011876    PNF31583.1    JU326601    AFE70357.1    CM001282    EHH62949.1    AHZZ02030739    CM001259    EHH27175.1    CABD030095328    AK057200    AK094816    AK289491    AC079203    AQIA01062119    JSUE03037923    AQIB01116437    ABGA01233763    NDHI03003689    PNJ08370.1    AACZ04060380    GABC01006592    GABD01003812    GABE01001690    NBAG03000487    JAA04746.1    JAA29288.1    JAA43049.1    PNI20010.1    RSAL01000097    RVE47692.1    GEGO01007089    JAR88315.1    ODYU01011285    SOQ56924.1    GEGO01006047    JAR89357.1    GECU01037003    GECU01013756    JAS70703.1    JAS93950.1    GDQN01004768    JAT86286.1    GEDC01003168    JAS34130.1    GEBQ01027849    JAT12128.1    BABH01028864    NEVH01018384    PNF23441.1    ABLF02006169    ABLF02055685    NEVH01015301    PNF27232.1    NEVH01026110    PNF14604.1    NEVH01026386    NEVH01013549    PNF14382.1    PNF28823.1    NEVH01010478    PNF32502.1    NEVH01000693    PNF43126.1    NEVH01020856    PNF21054.1    NEVH01024959    PNF16251.1    NEVH01024425    PNF17185.1    NEVH01005303    PNF38748.1   

Proteomes

UP000053240    UP000283053    UP000218220    UP000235965    UP000233220    UP000008225    + More
UP000009130    UP000028761    UP000233020    UP000233140    UP000001519    UP000233060    UP000233120    UP000005640    UP000233100    UP000006718    UP000233200    UP000233180    UP000029965    UP000233080    UP000001595    UP000002277    UP000079169    UP000035681    UP000005204    UP000007819   

PRIDE

Q96DM1    H9J3V8   

Pfam

PF13843   DDE_Tnp_1_7        + More
PF13842   Tnp_zf-ribbon_2

Interpro

IPR029526   PGBD        + More
IPR032718   PGBD4_C_Znf-ribbon       
IPR018159   Spectrin/alpha-actinin       

ProteinModelPortal

A0A194RRT0   A0A3S2TBD2   A0A2H1V5F3   A0A3S2LRG0   A0A2W1BDM1   A0A2A4JR95   + More
A0A2J7Q6H1   A0A2W1B9N8   A0A2J7PIK3   A0A2J7QZK8   A0A2A4IYX3   A0A2J7PD69   A0A3S2TTE3   A0A2A4K616   A0A2A4ITI3   A0A2K6S7R1   A0A2J7QSN3   F7FDY8   H9F6U8   G7PAN9   A0A096NT85   G7MWA2   A0A2K5BXT0   A0A2K5XAW3   G3QWT8   A0A2K5KZS5   A0A2K6ALX5   Q96DM1   A0A2K5UF88   A0A1D5R1S0   A0A2K6NHE6   A0A2K6JV20   A0A0D9SEG0   A0A2K5HN84   H2NMQ4   K7DKZ9   A0A3S2NSV7   A0A147BD88   A0A2H1WWX9   A0A3Q0JNJ9   A0A0K0E1W0   A0A147BEZ3   A0A1B6H7X0   A0A1E1WHA1   A0A1B6E873   A0A1B6KKZ3   H9J3V8   A0A2J7Q4C7   J9LP86   A0A2J7QF67   A0A2J7PE40   A0A2J7PDJ3   A0A2J7QV92   A0A2J7RQM3   A0A2J7PXL3   A0A2J7PIT0   A0A2J7PLH5   A0A2J7RD45  

KEGG

101738125    no KO assigned | (RefSeq) uncharacterized LOC101738125

GO

GO:0016021  

Length:

710

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.0450800000000001

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00189

outside

1  -  710

 

 

Pi

140.312189

Theta

160.291682

Tajima's D

-1.175948

CLR

107.569043

CSRT

0.108694565271736

Interpretation

Uncertain