Gene

KWMTBOMO11468

Pre Gene Modal

BGIBMGA001920

Annotation

PREDICTED:_leptin_receptor_gene-related_protein_isoform_X2_[Bombyx_mori]

Location

Bomo_Chr19(-):6385501-6388926      View in EpiBrowser

Location in the cell

PlasmaMembrane   Reliability : 4.943

CDS

ATGGACACAATAGGTTTGGTGTCGTTGGCATTCGCGGGTTCAATTGGAATGACATTTGTCATACTAGCTTGTGCCTTACCACAATACAAACTATGGTGGCCATTCTTCGTTGTGCTATTCTACATTCTGTGCCCAATACCTACGATGATCGCTAGGAGGCATACTGATGGTGCTGGAGGTTCAAATTCCGCTTGTATGGAAACTGCAGTATTTATCACAATGGGATTTTTAGTCAGCTCTTTTGCGCTACCGATAGTTCTCGCCAGGGCTGGTGTGATTTTTTGGGGTGCATGTTACCTTACACTGGCCGGTAACGTGATCGTATATCTGACGATCTTGGGTTTCTTCACCATCTTTGACATGGACGACTCCGATTATGCGATGTGGTGA

Protein

MDTIGLVSLAFAGSIGMTFVILACALPQYKLWWPFFVVLFYILCPIPTMIARRHTDGAGGSNSACMETAVFITMGFLVSSFALPIVLARAGVIFWGACYLTLAGNVIVYLTILGFFTIFDMDDSDYAMW

Uniprot

S4NWK7   A0A2H1X1P6   I4DJ64   A0A142LUZ6   A0A194QXN9   A0A1E1WI25   + More
A0A212EPV2   A0A3S2NTP2   A0A194QL92   A0A2A4JLB4   A0A1W4WK96   E2AP43   F4W4F5   A0A195EZ52   A0A158P374   J3JXR5   E2BAB0   R4V4M2   A0A0C9R707   A0A195DMX4   A0A151WYZ2   A0A195BIR9   A0A139WFE7   K7IY04   A0A232F276   A0A1L8DK75   A0A026W241   A0A1B6I8Q9   A0A195CF90   R4WDU1   R4G3W8   A0A224Y169   A0A1B6MAZ1   A0A1B0GGT7   A0A0P4VNL2   Q7YSY6   A0A023FAG5   A0A1B6LAF9   A0A0V0G572   A0A1B6CTT9   N6U7F3   A0A1B6DPA8   A0A2P8YSZ3   A0A0C9RA89   A0A0M9A0G5   A0A0A9XZF6   A0A1B6FRV0   A0A1B6CXD3   C4WSX4   A0A0P4VZJ7   A0A210PNU1   E9K6D5   T1HVL4   A0A0P6HW74   J9K6V6   E9H1B9   A0A0N8D1I6   A0A2R5LFE8   A0A2H8TJH4   A0A2T7NNE3   A0A0P6ASI4   A0A2S2R7S4   A0A1Q3FJB3   A0A131ZBC3   A0A224YL29   B0W1T5   G3MKX9   A0A023FLN2   A0A023FTP3   Q16G90   A0A2J7R5F5   C3YTG4   A0A023EF32   A0A3S3SMC1   U5EWY2   A0A2L2YA92   A0A3Q3KTS6   A0A3Q3KH25   L7LUW6   A0A087TSL1   A0A2L2YA94   A0A0L8G645   V5IIH3   T1JGY5   A0A3Q3KJ66   A0A131Y7F2   V5HVW0   A0A2A3EAY5   A0A3B4YL21   A0A3B4TWL8   A0A2U9BK68   W5J9F6   Q7SZ72   A0A182R7Y6   A0A182F3A2   A0A091NKG5   A0A131YBU8   A0A093I3Y3  

Pubmed

23622113    22651552    26354079    22118469    20798317    21719571    + More
21347285    22516182    18362917    19820115    20075255    28648823    24508170    23691247    27129103    14976983    25474469    23537049    29403074    25401762    26823975    28812685    20567508    21292972    26830274    28797301    22216098    17510324    18563158    24945155    26483478    26561354    25576852    25765539    20920257    23761445   

EMBL

GAIX01009419    JAA83141.1    ODYU01012730    SOQ59182.1    AK401332    BAM17954.1    + More
KT963072    AMS37611.1    KQ461073    KPJ09725.1    GDQN01004422    GDQN01003469    JAT86632.1    JAT87585.1    AGBW02013366    OWR43518.1    RSAL01000086    RVE48302.1    KQ458575    KPJ05705.1    NWSH01001178    PCG72233.1    GL441452    EFN64779.1    GL887532    EGI70850.1    KQ981905    KYN33585.1    ADTU01007770    BT128036    AEE62997.1    GL446696    EFN87365.1    KC740989    AGM32813.1    GBYB01003725    JAG73492.1    KQ980713    KYN14255.1    KQ982649    KYQ53103.1    KQ976467    KYM84185.1    KQ971352    KYB26652.1    NNAY01001254    OXU24603.1    GFDF01007334    JAV06750.1    KK107483    EZA50137.1    GECU01024417    JAS83289.1    KQ977935    KYM98708.1    AK417968    BAN21183.1    GAHY01001855    JAA75655.1    GFTR01002247    JAW14179.1    GEBQ01006884    JAT33093.1    AJWK01000737    GDKW01002066    JAI54529.1    AY340276    AAQ20841.1    GBBI01000713    JAC17999.1    GEBQ01019483    JAT20494.1    GECL01002929    JAP03195.1    GEDC01020481    JAS16817.1    APGK01045788    KB741039    KB632367    ENN74522.1    ERL93661.1    GEDC01009797    JAS27501.1    PYGN01000378    PSN47355.1    GBYB01003726    JAG73493.1    KQ435800    KOX73299.1    GBHO01018828    GDHC01009170    JAG24776.1    JAQ09459.1    GECZ01016875    JAS52894.1    GEDC01019181    JAS18117.1    AK340371    BAH70994.1    GDRN01095874    JAI59447.1    NEDP02005572    OWF38175.1    GU443952    GU443953    ADV57398.1    ACPB03010726    ACPB03010727    ACPB03010728    ACPB03010729    ACPB03010730    ACPB03010731    ACPB03010732    ACPB03010733    GDIQ01013374    JAN81363.1    ABLF02038030    GL732583    EFX74446.1    GDIQ01134706    GDIP01077959    JAL17020.1    JAM25756.1    GGLE01004052    MBY08178.1    GFXV01001633    MBW13438.1    PZQS01000010    PVD22691.1    GDIP01025025    JAM78690.1    GGMS01016868    MBY86071.1    GFDL01007430    JAV27615.1    GEDV01000771    JAP87786.1    GFPF01003787    MAA14933.1    DS231823    EDS26636.1    JO842530    AEO34147.1    GBBK01002005    JAC22477.1    GBBL01002273    JAC25047.1    CH478310    EAT33258.1    NEVH01006994    PNF36063.1    GG666551    EEN56531.1    JXUM01060121    GAPW01006200    GAPW01006199    GAPW01006198    KQ562088    JAC07400.1    KXJ76721.1    NCKU01000114    RWS17152.1    GANO01002766    JAB57105.1    IAAA01010099    LAA05064.1    GACK01010351    JAA54683.1    KK116552    KFM68100.1    IAAA01010100    LAA05068.1    KQ423631    KOF72511.1    GANP01003187    JAB81281.1    JH432213    GEFM01000637    JAP75159.1    GANP01001724    JAB82744.1    KZ288301    PBC28850.1    CP026249    AWP04454.1    ADMH02001784    ETN61092.1    BC053822    AAH53822.1    KL384943    KFP89562.1    GEFM01000375    JAP75421.1    KL214744    KFV61481.1   

Proteomes

UP000053240    UP000007151    UP000283053    UP000053268    UP000218220    UP000192223    + More
UP000000311    UP000007755    UP000078541    UP000005205    UP000008237    UP000078492    UP000075809    UP000078540    UP000007266    UP000002358    UP000215335    UP000053097    UP000078542    UP000092461    UP000019118    UP000030742    UP000245037    UP000053105    UP000242188    UP000015103    UP000007819    UP000000305    UP000245119    UP000002320    UP000008820    UP000235965    UP000001554    UP000069940    UP000249989    UP000285301    UP000261640    UP000054359    UP000053454    UP000242457    UP000261360    UP000261420    UP000246464    UP000000673    UP000075900    UP000069272    UP000053875   

Pfam

PF04133   Vps55

Interpro

IPR007262   Vps55/LEPROT       

ProteinModelPortal

S4NWK7   A0A2H1X1P6   I4DJ64   A0A142LUZ6   A0A194QXN9   A0A1E1WI25   + More
A0A212EPV2   A0A3S2NTP2   A0A194QL92   A0A2A4JLB4   A0A1W4WK96   E2AP43   F4W4F5   A0A195EZ52   A0A158P374   J3JXR5   E2BAB0   R4V4M2   A0A0C9R707   A0A195DMX4   A0A151WYZ2   A0A195BIR9   A0A139WFE7   K7IY04   A0A232F276   A0A1L8DK75   A0A026W241   A0A1B6I8Q9   A0A195CF90   R4WDU1   R4G3W8   A0A224Y169   A0A1B6MAZ1   A0A1B0GGT7   A0A0P4VNL2   Q7YSY6   A0A023FAG5   A0A1B6LAF9   A0A0V0G572   A0A1B6CTT9   N6U7F3   A0A1B6DPA8   A0A2P8YSZ3   A0A0C9RA89   A0A0M9A0G5   A0A0A9XZF6   A0A1B6FRV0   A0A1B6CXD3   C4WSX4   A0A0P4VZJ7   A0A210PNU1   E9K6D5   T1HVL4   A0A0P6HW74   J9K6V6   E9H1B9   A0A0N8D1I6   A0A2R5LFE8   A0A2H8TJH4   A0A2T7NNE3   A0A0P6ASI4   A0A2S2R7S4   A0A1Q3FJB3   A0A131ZBC3   A0A224YL29   B0W1T5   G3MKX9   A0A023FLN2   A0A023FTP3   Q16G90   A0A2J7R5F5   C3YTG4   A0A023EF32   A0A3S3SMC1   U5EWY2   A0A2L2YA92   A0A3Q3KTS6   A0A3Q3KH25   L7LUW6   A0A087TSL1   A0A2L2YA94   A0A0L8G645   V5IIH3   T1JGY5   A0A3Q3KJ66   A0A131Y7F2   V5HVW0   A0A2A3EAY5   A0A3B4YL21   A0A3B4TWL8   A0A2U9BK68   W5J9F6   Q7SZ72   A0A182R7Y6   A0A182F3A2   A0A091NKG5   A0A131YBU8   A0A093I3Y3  

KEGG

101744292    no KO assigned | (RefSeq) leptin receptor gene-related protein

GO

GO:0016021   GO:2000009   GO:0005768   GO:0032511  

PANTHER

PTHR12050  

Length:

129

Number of predicted TMHs:

4

Exp number of AAs in TMHs:

88.36934

Exp number, first 60 AAs:

43.4554

Total prob of N-in:

0.00964

POSSIBLE N-term signal

sequence

outside

1  -  3

TMhelix

4  -  26

inside

27  -  30

TMhelix

31  -  53

outside

54  -  67

TMhelix

68  -  90

inside

91  -  96

TMhelix

97  -  119

outside

120  -  129

 

 

Pi

192.438062

Theta

2.693713

Tajima's D

0.317866

CLR

3.325517

CSRT

0.504974751262437

Interpretation

Uncertain