SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11454
Pre Gene Modal
BGIBMGA001896
Annotation
PREDICTED:_uncharacterized_protein_LOC105389615_[Plutella_xylostella]
Location in the cell
Nuclear   Reliability : 3.066
 

Sequence

CDS
ATGTACGAGCGACTACCGAATCAACAGTTACATGGATTTGACGATGACGTTGTACGAGAAACTGCACCGCCATTCCGCGTGTTGGAGAAATGCCAGGATCTATGTTTACGTGATAGATCTGGAAACAGCCTAGTCAGGACCTGCAACTCTATAGATTTTCAACCAGGGGCCCGTATAGCGGCCTTCAGTCCGGAACCAGAGTACGAGGAGTCAACATGCTACTTAACCAGAGAGCAGGCTACACCTGAAGGGATTGGGACTTTAATGATTGTCCCTAACAGTGTGCATTTTAATGAAATTTGTCTCACGTCAAATCGGCCTGAACGAGAATGTCCGTCGCGTCGCTATGTTTTTGAACGTCACGCACGGAAACGTTTGAAGCTACCGCCCTCAGACCTAAAGGAAATAATGGTCGCCAATCGCACCGAATGCGAGGACAAGTGCTTGGGAGAATTCAGCTTTGTCTGCCGTTCTGCGACTTATGATTCGGCTTTAAGAACATGCTCCCTCAGTAGATTTACGAGACGCACCCACCCGGAGTTATTGGAGGACGACCACAACGCTGATTACTTGGAAAATACATGTCTTAATGTGGCCTAA
Protein
MYERLPNQQLHGFDDDVVRETAPPFRVLEKCQDLCLRDRSGNSLVRTCNSIDFQPGARIAAFSPEPEYEESTCYLTREQATPEGIGTLMIVPNSVHFNEICLTSNRPERECPSRRYVFERHARKRLKLPPSDLKEIMVANRTECEDKCLGEFSFVCRSATYDSALRTCSLSRFTRRTHPELLEDDHNADYLENTCLNVA

Summary

EMBL
KQ458575    KPJ05698.1    BABH01018024    BABH01018025    BABH01018026    NWSH01001679    + More
PCG70437.1    KQ460044    KPJ18342.1    PCG70438.1    PCG70439.1    AGBW02012181    OWR45493.1    ODYU01011287    SOQ56929.1    GAMC01001113    JAC05443.1    GDHF01004136    JAI48178.1    GECZ01026560    JAS43209.1    BT024975    ABE01205.1    UFQS01000185    UFQT01000185    SSX00884.1    SSX21264.1    JXUM01045188    KQ561429    KXJ78612.1    SSX00885.1    SSX21265.1    GDHF01031604    JAI20710.1    CCAG010002874    AE013599    AHN56110.1    JXJN01019758    CH480816    EDW47389.1    CM000158    EDW89999.1    CH963894    EDW77105.2    AAM68728.2    AAS64916.1    BT023928    ABB36432.1    CH954179    EDV56489.2    CM002911    KMY92970.1    AF334032    AAK09434.1    CH933808    EDW08262.1    CM000362    EDX06611.1    CH916367    EDW02401.1    AAF58668.2    AAM68729.1    CH940662    EDW58894.1    AF334031    AAK09433.1    CH902619    EDV35566.2    AXCM01012009    OUUW01000001    SPP74000.1    CM000071    EDY69318.3    SPP73999.1    KMY92971.1    APCN01000155    LBMM01001683    KMQ95890.1    CH479183    EDW35592.1    CP012524    ALC41440.1    CVRI01000042    CRK95498.1    GDHF01020520    JAI31794.1    AAAB01008807    EAA04001.5    GBXI01015801    JAC98490.1    CH477523    EAT39570.1    JRES01001578    KNC21851.1    ADMH02001280    ETN63230.1    DS231813    EDS25694.1    AXCN02000424    AXCN02000425    KQ976396    KYM92912.1    KQ978619    KYN29766.1    KQ978076    KYM97227.1    ADTU01011868    ADTU01011869    ADTU01011870    KQ981727    KYN37038.1    KQ982934    KYQ49170.1    ATLV01018601    KE525239    KFB43240.1    GL445930    EFN88769.1    GL443983    EFN61433.1    GGMR01000626    MBY13245.1    KQ435007    KZC13609.1    KQ971352    EFA06632.2    ABLF02040773    KZ288362    PBC26946.1    KK107034    EZA62053.1    QOIP01000008    RLU19270.1    NEVH01015827    PNF26529.1    PNF26531.1    ACPB03001675    GGMS01002118    MBY71321.1    AAZX01007897   
Pfam
PF00024   PAN_1        + More
PF01607   CBM_14
Interpro
IPR001507   ZP_dom        + More
IPR003609   Pan_app       
IPR036508   Chitin-bd_dom_sf       
IPR002557   Chitin-bd_dom       
SUPFAM
SSF57625   SSF57625       

Ontologies

Topology

Length:
199
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.00042
Exp number, first 60 AAs:
0
Total prob of N-in:
0.07875
outside
1  -  199
 
 

Population Genetic Test Statistics

Pi
148.755278
Theta
56.82222
Tajima's D
1.978732
CLR
0.254936
CSRT
0.88285585720714
Interpretation
Uncertain
Copyright@ 2018-2023    Any Comments and suggestions mail to:zhuzl@cqu.edu.cn   渝ICP备19006517号

渝公网安备 50010602502065号