SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11449
Pre Gene Modal
BGIBMGA001895
Annotation
PREDICTED:_uncharacterized_protein_LOC101744153_[Bombyx_mori]
Location in the cell
Nuclear   Reliability : 2.892
 

Sequence

CDS
ATGGAACCTCATCAAGAATCGTCGTCATTGATAAGCTCAAATACTTTAGAATGTAATGGCGCAAAGGATATAAAAGGAAAAGGGAGTCCCGTACAAGGAAGTGACAATACGAACTTGGAAAATATGTTTACATCGACTCCCAATCAAAGTTCAAGTCTTTTGTCGCTAAACGGACCTAGATCAAAACAAACCAATTGTTTATCGTATAATGAAGTGGTTTCATCGAATAGCTTAGCTGAAAGTAACGCAGAGAGTTCAAAAACTGTATGTACAAATCAGTCAAATGTGAAGATGAATTCGTGTAACGACAAAGACGTAATTTCTTCGAAAAAGGTGTACGATAACGGAGTTGAGCTCAACCAAGATGTGTTGTCATGTCAAAAACACAAGATTTGTCAAGATCTGGCTGCCAACAGCCCTAACGTTCCCTCAACAAGTGGTATTAACAGAGTTAATGAACCTGACAGTAATTGCAGAGAAAGCAGAAAAAGACCTTCCAGTTTAAAACTCAACAGGCCTAATTTTGATGCTGATGATAGTTCTAGTGATACAGGTAATGATGATTATTCTTTAGGCTCTGAAGATGGCTGTATATATACATATAGAGGTGGTGAGCATTTGGCTGATCTACCAAGTTCATTCTTCAGCTTGGATATGGGGCTGCCACTGGATAATCATCTACCCTTGCCGCCAAATTACCCTGTTCCACAGCAAGGCCAAAGAGAGCAAGGTTCACGTGCCTCTAGTCCAGATATGGATTTCCTTGAAATGGATTTTGACCCGGGGCCTTCTTGCGAAATGGATACTGGTGATGAATCCATACCGGATGCTGAAATAGAAGCAGCTAGTAACATGCCAGAGGAGAATGAACCAGTAATGATGTCACCTTCACCAGAAAATGTTTCAGCTCCCAGAGCTAACTCAGTAAATTTGCCAAGTGCTTCTTCGCACAATGATCTTGAAGCTTATTCACATGACATACCATCTACAAGTAACGATAACACAGGGCAAGGGGATGTGGTTGAGTCAACTAGTTTATATGGTCCTTATATAATGCAATCTAATGCAAGAGGAGAGGAATTATTAGTCCGCAGGACTATGTCACTTTGGCCAACCAGTGGACTTGCCTGTCATCATGCAACAACTGGAGACTTGGTTTGCCTGAGTGAAATGTTAAACAGTGATGAAGAAGAATATCCAGATGGTATTTTATATGAGTACCACAAAGGACACTCACGAAGAGTCGATCCCAATAATTTATCTTCTGTATACCATCTCAAAATAGCTAAAAATTCTACAGGAGAAAAGACGAAACCAGACAGTGATAGTCACATTCCAACTAAGGAGAATGACACAACCGAACAGGCAACAACTTCAAGTAATGTATGTGCGGAGCTACCACGTTGCATGGTCTGGTCAGAGCGAGAAGCCTGTGAGCGGCAGGTCACACAAATCGGCACCTCAGCTTGTGGAGCGACAGCAGTTATTAATGTTTTTATTGCTCTGGGTGTGCCAGTGAATATAGAAAAAATCACCTCAGCTGTTGGTACAAGACTAAGAGCTAACAATGCACCAATACCAAGGTACATTTTAAGCCGCGCGGTCGCCGGTTGTACTGCAGCTGATTTGATCACCGGCATACAGAGAGCTTCTGACGGCCTGGTCACGGCGAGGTTTTTCCCAACCTATCCTGAACGTGCCGTCTCGCTCTCGCACTGGTTAGCTGATTGGATAAGTTTAGGAGCAATACCGATCCTAACGCTAAATCTTCAGATGGGCTGTCAAGGAGACTTGCCAGATGCGTGGCACCATCAGATGGTGTTTGGGGTGTCGCCTCGCGGAGTTTACTTGTGTAATCCCGTGGAGTGTGTCCGCGAGCACGTCCTGTGGGCCCGACTGGTGTCGCCCTCAGTGCTACTAGTCCGCAGCCGGGACATCCTTAGCAGATACACTCCCGACACGGACCTCACGCCGCTCATGTTTGTGCCAGATCGGCGGTTTCACACGTACAATGTCTTTGGTCAAGTTGTGAACTTAATACGGGAATGGCGAGCCGCCGGCTGGGTGGAACGTTCGACGAGGACTCGGCACGTGCGCGTCCCGGCCTCGTACCAGGCCGGCGTCACGGTGGCCGCCCTCACCGGCTCCGAGGCTCACCGGCGACTGAACGCGGCGCGACAGCTGCCCGTCATAACGCCGCAGAACGATCCGGAATGA
Protein
MEPHQESSSLISSNTLECNGAKDIKGKGSPVQGSDNTNLENMFTSTPNQSSSLLSLNGPRSKQTNCLSYNEVVSSNSLAESNAESSKTVCTNQSNVKMNSCNDKDVISSKKVYDNGVELNQDVLSCQKHKICQDLAANSPNVPSTSGINRVNEPDSNCRESRKRPSSLKLNRPNFDADDSSSDTGNDDYSLGSEDGCIYTYRGGEHLADLPSSFFSLDMGLPLDNHLPLPPNYPVPQQGQREQGSRASSPDMDFLEMDFDPGPSCEMDTGDESIPDAEIEAASNMPEENEPVMMSPSPENVSAPRANSVNLPSASSHNDLEAYSHDIPSTSNDNTGQGDVVESTSLYGPYIMQSNARGEELLVRRTMSLWPTSGLACHHATTGDLVCLSEMLNSDEEEYPDGILYEYHKGHSRRVDPNNLSSVYHLKIAKNSTGEKTKPDSDSHIPTKENDTTEQATTSSNVCAELPRCMVWSEREACERQVTQIGTSACGATAVINVFIALGVPVNIEKITSAVGTRLRANNAPIPRYILSRAVAGCTAADLITGIQRASDGLVTARFFPTYPERAVSLSHWLADWISLGAIPILTLNLQMGCQGDLPDAWHHQMVFGVSPRGVYLCNPVECVREHVLWARLVSPSVLLVRSRDILSRYTPDTDLTPLMFVPDRRFHTYNVFGQVVNLIREWRAAGWVERSTRTRHVRVPASYQAGVTVAALTGSEAHRRLNAARQLPVITPQNDPE

Summary

Pfam
PF00348   polyprenyl_synt        + More
PF01470   Peptidase_C15
Interpro
IPR000092   Polyprenyl_synt        + More
IPR039702   FPS1       
IPR008949   Isoprenoid_synthase_dom_sf       
IPR036440   Peptidase_C15-like_sf       
IPR000816   Peptidase_C15       
IPR016125   Peptidase_C15-like       
SUPFAM
SSF48576   SSF48576        + More
SSF53182   SSF53182       
Gene 3D

Ontologies

Topology

Length:
738
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
0.34079
Exp number, first 60 AAs:
0
Total prob of N-in:
0.00030
outside
1  -  738
 
 

Population Genetic Test Statistics

Pi
166.04326
Theta
161.666642
Tajima's D
-0.638949
CLR
209.94325
CSRT
0.210339483025849
Interpretation
Uncertain
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