Gene

KWMTBOMO11448  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001928

Annotation

PREDICTED:_GTP-binding_protein_RAB2_isoform_X1_[Bombyx_mori]

Location

Bomo_Chr19(-):6025908-6033053      View in EpiBrowser

Full name

Ras-related protein Rab-2A      

Location in the cell

Cytoplasmic   Reliability : 1.907

CDS

ATGGCATACGCCTATCTTTTTAAATACATCATCATCGGGGACACAGGTGTGGGTAAATCATGTTTACTCCTTCAATTCACGGACAAAAGATTCCAACCGGTGCATGATCTCACTATTGGTGTTGAATTTGGTGCTCGGATGATCACAATTGATGGCAAGCAGATCAAGTTGCAGATTTGGGACACAGCTGGTCAAGAAGCTTTTAGGTCCATCACCCGATCGTACTACCGGGGCGCGGCTGGCGCTCTGTTAGTTTACGACATCACCAGACGGGAGACTTTCAATCATCTCACAACGTGGCTCGAGGACGCGCGACAACATTCCAACTCGAATATGGTCATTATGCTTATCGGTAACAAGAGCGATCTCGAATCCCGACGTGAAGTGAAGAAGGAAGAAGGCGAAGCGTTCGCTCGCGAGCACGGCCTCGTCTTCATGGAGACGTCTGCCAAGACTGCCGCCAACGTCGAGGAGGCTTTCATCAACACCGCCAAAGAGATCTATGAGAAGATACAGGAAGGAGTGTTTGATATCAATAATGAGGCGAACGGCATCAAGATAGGTCCTCAGCACTCGACGGGCGCCGGGGCGGGCGGCGCGGGGGGCGCGGGCGCGGGCGGCGCGTCCTCCGGTGGCTGCTGTTAG

Protein

MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINNEANGIKIGPQHSTGAGAGGAGGAGAGGASSGGCC

Description

Required for protein transport from the endoplasmic reticulum to the Golgi complex.

Similarity

Belongs to the small GTPase superfamily. Rab family.

Keywords

Complete proteome   Endoplasmic reticulum   ER-Golgi transport   Golgi apparatus   GTP-binding   Lipoprotein   Membrane   Nucleotide-binding   Prenylation   Protein transport   Reference proteome   Transport  

Feature

chain  Ras-related protein Rab-2A

Uniprot

H9IXE5   S4NNU0   A0A194QJE1   Q19N37   A0A1W4XAG8   A0A1B6CLR0   + More
A0A067QM96   A0A1W7R9W6   D6WSR2   A0A0T6B4Q2   A0A2P8XJA3   A0A1Y1M3Z5   A0A1B6I1U2   A0A060WV16   B7PKX9   A0A0K8R8P1   A0A0P6HLM1   B5DG90   A0A315VPZ5   A0A023FI28   A0A3Q2D8F6   F0J9U9   A0A023GFN2   A0A023FXF2   A0A3P8WHI9   A0A087XG17   A0A3B3DNR2   A0A3Q3A996   A0A3B3W2Z5   A0A3P9PJZ3   A0A3B3H4K5   A0A1A8QB75   A0A1A8JM78   A0A1A8LPJ9   A0A1A7X8G2   A0A2I4C337   A0A1A8E8T3   A0A3P9MLS0   A0A1A8HCD6   A0A1A8VGB6   A0A3Q4M3P1   A0A3Q3IQJ4   A0A2U9BKU2   A0A1D2MQX5   A0A3Q3M722   A0A3B4Z2E1   A0A3Q1EQP6   A0A3Q2Y3N9   A0A3B5Q497   A0A3Q1D620   A0A3B4UM98   A0A3Q3G729   A0A3P8SRC0   A0A3Q1H7V3   I3KIJ2   C3XU13   A0A224Z7J5   A0A131YRH6   L7M7K0   A0A131XIF2   A0A3B5JYT5   A0A3B4G0K0   A0A3Q2VY53   A0A3P9BW53   A0A212EVI7   A0A3Q2Q5U1   A0A1B6KEN9   A0A1L8FZ34   A0A0S7LKB9   A0A087UTE5   A0A1E1XI59   V5GUJ3   A0A060WHN2   A0A3P9APH4   A0A1S3R1W4   G1KEK6   A0A3Q1H7W2   H3AX47   A0A146ZHU0   Q803J3   A0A226NH39   W5MCP7   A0A218VC70   A0A3M0KQI6   A0A2D4MLW8   A0A226P3Q4   U3JSV8   A0A2D4JKD8   V8P4D1   A0A1W7RED5   T1E4K6   H0ZLR3   A0A2H6N119   J3S0L3   A0A0B8RXK9   A0A2D4KCB2   U3F6X0   G1NYT8   Q90965   Q0PD65  

Pubmed

19121390    23622113    26354079    24845553    18362917    19820115    + More
29403074    28004739    24755649    19878547    20433749    29703783    21362191    24487278    29451363    17554307    25186727    27289101    23542700    18563158    28797301    26830274    25576852    28049606    21551351    22118469    27762356    28503490    25069045    9215903    23594743    24621616    24297900    26358130    23758969    20360741    23025625    25476704    23915248    21993624    8746459    11773082    11856727    12040188    12578829    16923123    21183079   

EMBL

BABH01018030    GAIX01012144    JAA80416.1    KQ458575    KPJ05688.1    DQ517933    + More
ABF66620.1    GEDC01022973    JAS14325.1    KK853253    KDR09308.1    GFAH01000473    JAV47916.1    KQ971354    EFA07147.1    LJIG01009784    KRT82387.1    PYGN01001941    PSN32081.1    GEZM01042610    GEZM01042609    JAV79758.1    GECU01026832    JAS80874.1    FR904738    CDQ70862.1    ABJB010211187    DS736644    EEC07251.1    GADI01006575    GEFM01005421    JAA67233.1    JAP70375.1    GDIQ01017016    JAN77721.1    BT043649    BT045105    BT058710    BT059707    BT060429    ACH70764.1    ACI33367.1    ACN10423.1    ACN11420.1    NHOQ01001318    PWA25163.1    GBBK01003693    JAC20789.1    BK007650    DAA34556.1    GBBM01002542    JAC32876.1    GBBL01001907    JAC25413.1    AYCK01010596    HAEI01002036    HAEH01010850    SBR90761.1    HAED01012860    HAEE01001195    SBR21211.1    HAEF01008037    HAEG01008196    SBR45839.1    HADW01012790    HADX01004237    SBP14190.1    HADZ01005063    HAEA01013034    SBQ41514.1    HAEB01009329    HAEC01012815    SBQ81032.1    HADY01002158    HAEJ01017751    SBS58208.1    CP026249    AWP04647.1    LJIJ01000677    ODM95406.1    AERX01030339    AERX01030340    GG666464    EEN68387.1    GFPF01011226    MAA22372.1    GEDV01006698    JAP81859.1    GACK01005916    JAA59118.1    GEFH01001682    JAP66899.1    AGBW02012181    OWR45489.1    GEBQ01030071    JAT09906.1    CM004476    OCT76846.1    GBYX01164343    JAO89918.1    KK121519    KFM80634.1    GFAC01000295    JAT98893.1    GALX01000622    JAB67844.1    FR904547    CDQ66546.1    AFYH01132299    AFYH01132300    AFYH01132301    AFYH01132302    AFYH01132303    AFYH01132304    AFYH01132305    AFYH01132306    AFYH01132307    AFYH01132308    GCES01020392    JAR65931.1    CR450710    CR847864    BC044459    BC165141    AAH44459.1    AAI65141.1    MCFN01000055    OXB66727.1    AHAT01004396    AHAT01004397    AHAT01004398    MUZQ01000013    OWK63360.1    QRBI01000104    RMC15356.1    IACM01111659    LAB34375.1    AWGT02000185    OXB74220.1    AGTO01001021    IACK01207441    LAA96946.1    AZIM01000826    ETE69185.1    GDAY02001934    JAV49498.1    GAAZ01001970    JAA95973.1    ABQF01005229    ABQF01005230    ABQF01005231    IACI01034229    LAA22244.1    JU175575    GBEX01002705    AFJ51099.1    JAI11855.1    GBSH01002210    GBSH01002168    JAG66858.1    IACL01046298    IACL01046299    IACL01046300    LAB06361.1    GAEP01001259    GBEW01000778    JAB53562.1    JAI09587.1    AAPE02009572    AAPE02009573    X84220    AB232585    CH466538    BAF02847.1    EDL05680.1   

Proteomes

UP000005204    UP000053268    UP000192223    UP000027135    UP000007266    UP000245037    + More
UP000193380    UP000001555    UP000087266    UP000265020    UP000265120    UP000028760    UP000261560    UP000264800    UP000261500    UP000242638    UP000001038    UP000192220    UP000265180    UP000265200    UP000261580    UP000261600    UP000246464    UP000094527    UP000261640    UP000261360    UP000257200    UP000264820    UP000002852    UP000257160    UP000261420    UP000261660    UP000265080    UP000265040    UP000005207    UP000001554    UP000005226    UP000261460    UP000264840    UP000265160    UP000007151    UP000265000    UP000186698    UP000054359    UP000265140    UP000001646    UP000008672    UP000000437    UP000198323    UP000018468    UP000197619    UP000269221    UP000198419    UP000016665    UP000007754    UP000001074    UP000000539   

PRIDE

H9IXE5    Q19N37    Q90965   

Pfam

PF00071   Ras

Interpro

IPR027417   P-loop_NTPase        + More
IPR001806   Small_GTPase       
IPR005225   Small_GTP-bd_dom       

SUPFAM

SSF52540   SSF52540       

ProteinModelPortal

H9IXE5   S4NNU0   A0A194QJE1   Q19N37   A0A1W4XAG8   A0A1B6CLR0   + More
A0A067QM96   A0A1W7R9W6   D6WSR2   A0A0T6B4Q2   A0A2P8XJA3   A0A1Y1M3Z5   A0A1B6I1U2   A0A060WV16   B7PKX9   A0A0K8R8P1   A0A0P6HLM1   B5DG90   A0A315VPZ5   A0A023FI28   A0A3Q2D8F6   F0J9U9   A0A023GFN2   A0A023FXF2   A0A3P8WHI9   A0A087XG17   A0A3B3DNR2   A0A3Q3A996   A0A3B3W2Z5   A0A3P9PJZ3   A0A3B3H4K5   A0A1A8QB75   A0A1A8JM78   A0A1A8LPJ9   A0A1A7X8G2   A0A2I4C337   A0A1A8E8T3   A0A3P9MLS0   A0A1A8HCD6   A0A1A8VGB6   A0A3Q4M3P1   A0A3Q3IQJ4   A0A2U9BKU2   A0A1D2MQX5   A0A3Q3M722   A0A3B4Z2E1   A0A3Q1EQP6   A0A3Q2Y3N9   A0A3B5Q497   A0A3Q1D620   A0A3B4UM98   A0A3Q3G729   A0A3P8SRC0   A0A3Q1H7V3   I3KIJ2   C3XU13   A0A224Z7J5   A0A131YRH6   L7M7K0   A0A131XIF2   A0A3B5JYT5   A0A3B4G0K0   A0A3Q2VY53   A0A3P9BW53   A0A212EVI7   A0A3Q2Q5U1   A0A1B6KEN9   A0A1L8FZ34   A0A0S7LKB9   A0A087UTE5   A0A1E1XI59   V5GUJ3   A0A060WHN2   A0A3P9APH4   A0A1S3R1W4   G1KEK6   A0A3Q1H7W2   H3AX47   A0A146ZHU0   Q803J3   A0A226NH39   W5MCP7   A0A218VC70   A0A3M0KQI6   A0A2D4MLW8   A0A226P3Q4   U3JSV8   A0A2D4JKD8   V8P4D1   A0A1W7RED5   T1E4K6   H0ZLR3   A0A2H6N119   J3S0L3   A0A0B8RXK9   A0A2D4KCB2   U3F6X0   G1NYT8   Q90965   Q0PD65  

PDB

4RKE     E-value=9.58387e-93,     Score=864

KEGG

733057    K07877 Ras-related protein Rab-2A | (RefSeq) GTP-binding protein RAB2

GO

GO:0005525   GO:0003924   GO:0006886   GO:0005794   GO:0032482   GO:0004767   GO:0007030   GO:0019003   GO:0000139   GO:0005789   GO:0016192   GO:0033116   GO:0007264   GO:0008270   GO:0004180   GO:0007016   GO:0016010   GO:0016740   GO:0003707   GO:0006418   GO:0003824  

Subcellular location

Endoplasmic reticulum-Golgi intermediate compartment membrane  
Endoplasmic reticulum membrane  
Golgi apparatus membrane  

Length:

214

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.39634

Exp number, first 60 AAs:

0.38178

Total prob of N-in:

0.08858

outside

1  -  214

 

 

Pi

136.098377

Theta

152.435447

Tajima's D

-0.486693

CLR

0.277567

CSRT

0.246237688115594

Interpretation

Uncertain