Gene

KWMTBOMO11446  Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001929

Annotation

PREDICTED:_peroxisomal_multifunctional_enzyme_type_2-like_[Papilio_xuthus]

Location

Bomo_Chr19(-):5997188-6017303      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.512

CDS

ATGGATCAATTGCGTTTCGACGGACGTGTAGCAGTAGTAACTGGTGCTGGAGGAGGTTTAGGGAAAGCCTACGCTCTGCTCTTAGCATCTCGAGGTGCTAAAGTTGTCGTCAATGACCTAGGCAGTGCCAGAGACGGTGCCGGAAAGTCCAACGCAGCGGATGCCGTTGTTAAAGAAATCAAAGACAAAGGTGGAGTAGCTGTAGCTGATTACAACTCTGTCGTCGAGGGGGAGAAGCTAATAAAAACGGCAATTGATAATTTTGGGAGGATTGATATTCTTATCAACAATGCTGGCATTCTCCGTGATAAGAGCTTCACTAAAATGACTGAGCAGGACTGGGACTTAATCCAAGCTGTCCATTTAAAAGGTGCTTTTAAGACAACTCATGCAGCATGGGAAACATTCAGAAAGCAAAAATATGGTCGCATTGTAATGACCTCAAGCAATGCGGGCTTGTTTGGGAACTTTGGTCAGGCTAATTACAGTGCTGCTAAACTTGGTTTAGTTGGCTTAGCCAACACATTGGCCATTGAAGGCGCAAAATACAATATCAAGGTGAACACAATTGTTCCCACGGCGGCGTCTCGTCTCACTGAAGATATCCTCCCGCCAGAGATGTATGAGGCCATGAAGCCGGAATTAATTGCTCCAGTTGTTGCGTACATGGTACACGAGTCCTTCAACGATACCGGTGCTATCATCGATTCCACATTGGGTTTCGCAACCAAAGCACAATTATTTAGGAGCAATGGAGCCCCACTCAAGAAGAGACCTTCAGACCCGGTCACGATCGAATCGGTCAAAGAGAATTGGTCCAAAGTCGTGGACATGAGAGGCGCCAAACATTTGGAGAAGATCGCAGATGTCACGCTAGAACTTGTCGACAAACTTCAGGAATTTGAAGAACGTTCCAAACTGGACGGCGACAAGGACTCTTACTGGACGACGTACGACTACAACGCAAAGGATTTAGTCATCTACGCCCTGGGAGTGGGAGCTTCGGTCGAGAACCCGACCGATTTGAAGTTCCTTTACGAGAGCCACGAGAATTTCTCTCCCTTACCCTCGTTCTTCATACTGGCTGGAATGTGCATGGAGGCCCCGATCGTTGCTAACGCCATGCCGCCGGGCAAATTCGCTGATTTCACTAATGTGCTTCACGGAGAGCAGTACATTGAATTCGTCGGTGACTTCCCTGGCACCGAGGGAGTCTTCACAACCCGTTGTTACGTTGTCGATATCCTGGACAAGGGCTCCAGCGCCGTGGCCATTGTGAACAGTGAAATATTCCAAAATAAGCAATTGGTATGCCGAACCCAGCAGCACATTTTCGTGCTAGGCCAAGGAGGTTTCGGTGGACCCCGCAATAGCAAGAACGCTATCGGCGTCGGAAACGCACCGAAGCGAAATCCTGATGCCGTCGTGGAACAACGCACCGCCGAAGACCAGGCTGCTCTCTACAGAATGTCTGGTGACCTCAATCCTCTGCATATTGATCCCAACGTTGCGACCGCAAGTGGACACAAGAAGCCGATTCTCCATGGACTCGCATCCCTTGGTTTTTCAGCTAGACATGTTCTAGCTAAATTTGGTGGAAACGACTCCAGCAATGTGAAAGCCTTAAAGGCACGTTTTGTGAAACCAGTAATGCCTGGTGAAACCCTTGTTACTGAGATGTGGGTAGAAGGCAAGAGAGTTCATTTCCAGACCAAAACTAAAGAAACTGGCAACACAGTGATTGCTGGTGCATACATTGATTTCAAGAATGTGGTATCAGCTGGTGGGTCCCCATCTGCAGCAGCACCATCCACTGCGTCTGGCACTTTAAAGAGTGATGCACTCTTTGCAAAAATCCAAGACGAAGTAAAAAAGAATCCTGACAAAGCTACGACAGTTGGTGGTGTTTTCTTATATAACATCACTGATAACGGAAAAACAGTGAAACAATGGACACTAGACCTCAAGTCCCCAGTTGTTCACGACGGAGCACCGAAGAGTGGAAAGGCAGATACGACTATGACAATTGCAGATGCTGATTTAGTGCAAATTGCATCTGGAGCTCTCAATCCTCAAGTTGCATACATGAAAGGAAAACTTAAAATCGCAGGCAACATCATGCTCGCCCAAAAACTTGGACCTTTGCTCAAATCAGATGCTAAATTGTGA

Protein

MDQLRFDGRVAVVTGAGGGLGKAYALLLASRGAKVVVNDLGSARDGAGKSNAADAVVKEIKDKGGVAVADYNSVVEGEKLIKTAIDNFGRIDILINNAGILRDKSFTKMTEQDWDLIQAVHLKGAFKTTHAAWETFRKQKYGRIVMTSSNAGLFGNFGQANYSAAKLGLVGLANTLAIEGAKYNIKVNTIVPTAASRLTEDILPPEMYEAMKPELIAPVVAYMVHESFNDTGAIIDSTLGFATKAQLFRSNGAPLKKRPSDPVTIESVKENWSKVVDMRGAKHLEKIADVTLELVDKLQEFEERSKLDGDKDSYWTTYDYNAKDLVIYALGVGASVENPTDLKFLYESHENFSPLPSFFILAGMCMEAPIVANAMPPGKFADFTNVLHGEQYIEFVGDFPGTEGVFTTRCYVVDILDKGSSAVAIVNSEIFQNKQLVCRTQQHIFVLGQGGFGGPRNSKNAIGVGNAPKRNPDAVVEQRTAEDQAALYRMSGDLNPLHIDPNVATASGHKKPILHGLASLGFSARHVLAKFGGNDSSNVKALKARFVKPVMPGETLVTEMWVEGKRVHFQTKTKETGNTVIAGAYIDFKNVVSAGGSPSAAAPSTASGTLKSDALFAKIQDEVKKNPDKATTVGGVFLYNITDNGKTVKQWTLDLKSPVVHDGAPKSGKADTTMTIADADLVQIASGALNPQVAYMKGKLKIAGNIMLAQKLGPLLKSDAKL

Uniprot

H9IXE6   A0A068FL90   A0A194RBS8   A0A3S2PDK5   A0A194QQ89   A0A2A4K2G5   + More
A0A2H1WRK6   D6WRU6   V5GL08   N6UHW1   U4UI19   A0A2J7RKI0   A0A2U7NZ18   B0W2X6   A0A2M4BFE2   Q173X5   A0A1Q3FJG4   A0A182F386   A0A2M4A3N2   W5JNA5   A0A1W4WW02   A0A2M3Z1W1   A0A2M4BFE1   A0A1L8DZM1   U5EUC6   A0A182H8E3   A0A182JLW7   A0A182YM85   E2A3N8   A0A2M4A3Q2   A0A1L8DZ43   A0A182X4X6   A0A2P8YP12   A0A182V9M0   A0A182TYD6   A0A182QSZ5   Q7Q8E6   A0A182IBG9   A0A195B0A2   A0A1B6F4C3   A0A026WES8   A0A182WFD4   E9IFD5   A0A182K685   A0A084VJ72   A0A151JB27   A0A182PJF8   A0A0L7QZX3   A0A158NKK2   A0A182RK19   A0A182NGS5   A0A195FBK8   A0A151IJR7   A0A182KN25   A0A088AVD8   J9K670   A0A2A3EBI3   A0A1B6KF36   V9I9V8   A0A224XC96   A0A2S2NDC8   A0A069DX18   A0A1Y1MAJ1   A0A154PMS7   A0A1J1HT46   E2BZ59   A0A336LWL1   A0A1B6JVH0   A0A2M3Z1Y8   A0A023F4G1   A0A069DVZ7   A0A0V0G3S4   A0A146L102   A0A232FAS5   A0A0N0U600   K7J5A5   A0A0P4VTS0   A0A0A9Z5K8   E0VSA3   A0A2J7RKJ0   A0A087TET1   A0A1L8EFV3   A0A0L0CKA5   A0A1L8DZ77   A0A2B4SWX8   A0A0T6B4U0   A0A1I8Q3A7   A0A060YW69   A7STV7   A0A131Y8W5   V4A9L5   A0A1S3PKY9   A0A2T7NFV3   A0A1A9WVR7   A0A2J8XER1   B4NEM9   H2V179   A0A3B5QBU2   A0A3Q2GPE7   T1PE12  

Pubmed

19121390    26385554    26354079    18362917    19820115    23537049    + More
17510324    20920257    23761445    26483478    25244985    20798317    29403074    12364791    14747013    17210077    24508170    30249741    21282665    24438588    21347285    20966253    26334808    28004739    25474469    26823975    28648823    20075255    27129103    25401762    20566863    26108605    24755649    17615350    23254933    17994087    21551351    23542700   

EMBL

BABH01018031    KJ622103    AID66693.1    KQ460436    KPJ14730.1    RSAL01000086    + More
RVE48316.1    KQ458575    KPJ05686.1    NWSH01000239    PCG78094.1    ODYU01010534    SOQ55709.1    KQ971351    EFA07495.1    GALX01003687    JAB64779.1    APGK01035263    APGK01035264    KB740923    ENN78237.1    KB632333    ERL92672.1    NEVH01002717    PNF41355.1    MF944109    ATD87109.1    DS231829    EDS30335.1    GGFJ01002629    MBW51770.1    CH477416    EAT41321.1    GFDL01007377    JAV27668.1    GGFK01001927    MBW35248.1    ADMH02000616    ETN65616.1    GGFM01001771    MBW22522.1    GGFJ01002628    MBW51769.1    GFDF01002342    JAV11742.1    GANO01001542    JAB58329.1    JXUM01029812    JXUM01029813    KQ560865    KXJ80570.1    GL436457    EFN71930.1    GGFK01001947    MBW35268.1    GFDF01002343    JAV11741.1    PYGN01000456    PSN45997.1    AXCN02002201    AAAB01008944    EAA10131.4    APCN01000689    KQ976692    KYM77886.1    GECZ01024667    JAS45102.1    KK107249    QOIP01000013    EZA54463.1    RLU15189.1    GL762838    EFZ20719.1    ATLV01013474    KE524860    KFB38016.1    KQ979182    KYN22316.1    KQ414673    KOC64143.1    ADTU01018869    KQ981693    KYN37798.1    KQ977294    KYN03888.1    ABLF02040082    KZ288311    PBC28546.1    GEBQ01029938    JAT10039.1    JR036859    AEY57432.1    GFTR01007832    JAW08594.1    GGMR01002605    MBY15224.1    GBGD01000637    JAC88252.1    GEZM01037646    JAV82008.1    KQ434987    KZC13159.1    CVRI01000020    CRK90730.1    GL451563    EFN79028.1    UFQS01000257    UFQT01000257    SSX02065.1    SSX22442.1    GECU01021846    GECU01004501    JAS85860.1    JAT03206.1    GGFM01001796    MBW22547.1    GBBI01002803    JAC15909.1    GBGD01000636    JAC88253.1    GECL01003780    JAP02344.1    GDHC01016581    JAQ02048.1    NNAY01000507    OXU27944.1    KQ435762    KOX75508.1    AAZX01006443    GDKW01000678    JAI55917.1    GBHO01004453    GBRD01014193    JAG39151.1    JAG51633.1    DS235748    EEB16259.1    PNF41354.1    KK114886    KFM63620.1    GFDG01001275    JAV17524.1    JRES01000290    KNC32696.1    GFDF01002499    JAV11585.1    LSMT01000017    PFX32925.1    LJIG01009770    KRT82416.1    FR914718    CDQ93240.1    DS469803    EDO32836.1    GEFM01000087    JAP75709.1    KB200701    ESP00684.1    PZQS01000013    PVD20051.1    NDHI03003367    PNJ80388.1    CH964239    EDW82198.1    KA646944    AFP61573.1   

Proteomes

UP000005204    UP000053240    UP000283053    UP000053268    UP000218220    UP000007266    + More
UP000019118    UP000030742    UP000235965    UP000002320    UP000008820    UP000069272    UP000000673    UP000192223    UP000069940    UP000249989    UP000075880    UP000076408    UP000000311    UP000076407    UP000245037    UP000075903    UP000075902    UP000075886    UP000007062    UP000075840    UP000078540    UP000053097    UP000279307    UP000075920    UP000075881    UP000030765    UP000078492    UP000075885    UP000053825    UP000005205    UP000075900    UP000075884    UP000078541    UP000078542    UP000075882    UP000005203    UP000007819    UP000242457    UP000076502    UP000183832    UP000008237    UP000215335    UP000053105    UP000002358    UP000009046    UP000054359    UP000037069    UP000225706    UP000095300    UP000193380    UP000001593    UP000030746    UP000087266    UP000245119    UP000091820    UP000007798    UP000005226    UP000002852    UP000265020   

PRIDE

H9IXE6   

Pfam

PF02036   SCP2        + More
PF00106   adh_short
PF01575   MaoC_dehydratas
PF13452   MaoC_dehydrat_N
PF13679   Methyltransf_32

Interpro

IPR002539   MaoC-like_dom        + More
IPR003033   SCP2_sterol-bd_dom       
IPR036291   NAD(P)-bd_dom_sf       
IPR029069   HotDog_dom_sf       
IPR020904   Sc_DH/Rdtase_CS       
IPR002347   SDR_fam       
IPR036527   SCP2_sterol-bd_dom_sf       
IPR039569   MaoC-like_dehydrat_N       
IPR025714   Methyltranfer_dom       
IPR029063   SAM-dependent_MTases       

SUPFAM

SSF54637   SSF54637        + More
SSF51735   SSF51735       
SSF55718   SSF55718       
SSF53335   SSF53335       

Gene 3D

3.30.1050.10    

ProteinModelPortal

H9IXE6   A0A068FL90   A0A194RBS8   A0A3S2PDK5   A0A194QQ89   A0A2A4K2G5   + More
A0A2H1WRK6   D6WRU6   V5GL08   N6UHW1   U4UI19   A0A2J7RKI0   A0A2U7NZ18   B0W2X6   A0A2M4BFE2   Q173X5   A0A1Q3FJG4   A0A182F386   A0A2M4A3N2   W5JNA5   A0A1W4WW02   A0A2M3Z1W1   A0A2M4BFE1   A0A1L8DZM1   U5EUC6   A0A182H8E3   A0A182JLW7   A0A182YM85   E2A3N8   A0A2M4A3Q2   A0A1L8DZ43   A0A182X4X6   A0A2P8YP12   A0A182V9M0   A0A182TYD6   A0A182QSZ5   Q7Q8E6   A0A182IBG9   A0A195B0A2   A0A1B6F4C3   A0A026WES8   A0A182WFD4   E9IFD5   A0A182K685   A0A084VJ72   A0A151JB27   A0A182PJF8   A0A0L7QZX3   A0A158NKK2   A0A182RK19   A0A182NGS5   A0A195FBK8   A0A151IJR7   A0A182KN25   A0A088AVD8   J9K670   A0A2A3EBI3   A0A1B6KF36   V9I9V8   A0A224XC96   A0A2S2NDC8   A0A069DX18   A0A1Y1MAJ1   A0A154PMS7   A0A1J1HT46   E2BZ59   A0A336LWL1   A0A1B6JVH0   A0A2M3Z1Y8   A0A023F4G1   A0A069DVZ7   A0A0V0G3S4   A0A146L102   A0A232FAS5   A0A0N0U600   K7J5A5   A0A0P4VTS0   A0A0A9Z5K8   E0VSA3   A0A2J7RKJ0   A0A087TET1   A0A1L8EFV3   A0A0L0CKA5   A0A1L8DZ77   A0A2B4SWX8   A0A0T6B4U0   A0A1I8Q3A7   A0A060YW69   A7STV7   A0A131Y8W5   V4A9L5   A0A1S3PKY9   A0A2T7NFV3   A0A1A9WVR7   A0A2J8XER1   B4NEM9   H2V179   A0A3B5QBU2   A0A3Q2GPE7   T1PE12  

PDB

3OML     E-value=7.88776e-172,     Score=1552

KEGG

101745499    K12405 (3R)-3-hydroxyacyl-CoA dehydrogenase / 3a,7a,12a-trihydroxy-5b-cholest-24-enoyl-CoA hydratase

PATHWAY

01040    Biosynthesis of unsaturated fatty acids - Bombyx mori (domestic silkworm)
01100    Metabolic pathways - Bombyx mori (domestic silkworm)
01212    Fatty acid metabolism - Bombyx mori (domestic silkworm)
04146    Peroxisome - Bombyx mori (domestic silkworm)

GO

GO:0016491   GO:0016829   GO:0033989   GO:0016021   GO:0004300   GO:0042803   GO:0080023   GO:0048666   GO:0048568   GO:0006508   GO:0008270   GO:0004180   GO:0007016   GO:0016010   GO:0016740   GO:0003707   GO:0006418   GO:0003824  

Length:

722

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.757069999999997

Exp number, first 60 AAs:

0.61824

Total prob of N-in:

0.02896

outside

1  -  722

 

 

Pi

206.341615

Theta

174.489392

Tajima's D

0.34022

CLR

0.706608

CSRT

0.467676616169192

Interpretation

Uncertain