SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11444
Pre Gene Modal
BGIBMGA001930
Annotation
PREDICTED:_growth_arrest-specific_protein_1-like_[Bombyx_mori]
Location in the cell
Extracellular   Reliability : 4.727
 

Sequence

CDS
ATGTGGGTGGTGGCCGCGTTGCTGGCGGCATCGGCGGCGGCGGTGGCGTCCATGCCGTGCACGGAGGCCCGCAACCGCTGCATGTACCGGACCGGATGCGGCGCCGCGCTCTCCAACTACATGATGATGTGCGAACGAGTGCTCACAACCGACTTGCCCCCCACGGCATGCCCAAACGAATGCAGCAACGCTCTTATCGCGCTCACTTCCACCGAAGAGGGAAAGGAGCTCATGAGTTGTGAATGCGAAGACGACTATTGCATAGAGGCAAAGGACAGGATTGACGTGTGTCGGTCACAAGTAATGAAGGGCGCTTCGGATGTCATACCATCCTGCAGCCTCTCCCAACTAATATGCCTGGCCGACGCCCAGTGTTCGACTGCTTTACAATACTACCATCATCTATGCCGTTCAATGTTCCGAGGAAGAAAATGCTCAAAAAAATGCATTAACTCCATTGAAATTCTAAGGAAACAGGAAAAGGCCGCAGCGTTGACAGTTTGCCAATGCGACGGCACCGAAGACTACGATTGCCCTACAATGCAAGAGAATCTGGCTAGGTTGTGCTTCCACAAACATAAGAATCACACGCGAAGTCATGACCGACACGGAGAGAAACATAAGAAAGTCAATGAAGTAGTTTATGCGAGTGCTTCCAGTCTCAGTGATATATCGCTGTTGTTATTCTTGACTTGTATTCTGAGTGCTTTCTCATGA
Protein
MWVVAALLAASAAAVASMPCTEARNRCMYRTGCGAALSNYMMMCERVLTTDLPPTACPNECSNALIALTSTEEGKELMSCECEDDYCIEAKDRIDVCRSQVMKGASDVIPSCSLSQLICLADAQCSTALQYYHHLCRSMFRGRKCSKKCINSIEILRKQEKAAALTVCQCDGTEDYDCPTMQENLARLCFHKHKNHTRSHDRHGEKHKKVNEVVYASASSLSDISLLLFLTCILSAFS

Summary

Similarity
Belongs to the peptidase S8 family.
EMBL
BABH01018032    NWSH01000239    PCG78098.1    ODYU01010602    SOQ55822.1    KQ459169    + More
KPJ03417.1    KQ460436    KPJ14732.1    RSAL01000086    RVE48318.1    KQ971351    EFA06406.1    GEZM01013038    JAV92802.1    GALX01000918    JAB67548.1    NEVH01006723    PNF36924.1    PYGN01000467    PSN45828.1    GEBQ01003922    JAT36055.1    ACPB03009220    GL732523    EFX90446.1    GDIQ01260286    LRGB01000592    JAJ91438.1    KZS17738.1    GDIP01028352    JAM75363.1    GBHO01034614    JAG08990.1    GDIQ01014423    JAN80314.1    GBRD01015636    GDHC01018000    JAG50190.1    JAQ00629.1    KQ434905    KZC11265.1    KQ414592    KOC70193.1    KB632085    ERL88640.1    APGK01045482    KB741037    ENN74604.1    KQ435756    KOX75983.1    KZ288191    PBC34425.1    LJIG01002068    KRT84872.1    MWRG01009443    PRD27076.1    GBYB01004059    JAG73826.1    KK114744    KFM63217.1    HACA01006330    CDW23691.1    IAAA01023018    IAAA01023019    LAA07849.1    GFXV01001310    GFXV01002489    MBW13115.1    MBW14294.1    JH431009    GGMR01017584    MBY30203.1    ABLF02021517    GGMS01000561    MBY69764.1    HACA01023893    CDW41254.1    BT078287    ACO12711.1    HACG01019895    CEK66760.1    KQ433944    KOF62290.1    NEDP02001616    OWF52860.1    KB200521    ESP01246.1    PZQS01000013    PVD19969.1    AMQN01007332    KB300467    ELU06717.1    AMQN01005144    KB295236    ELU13412.1    MTYJ01000016    OQV22683.1    JH816980    EKC42622.1    GBYX01437236    JAO44111.1    CP026247    AWP01939.1    AYCK01007181    JW875051    AFP07568.1    GCES01012172    JAR74151.1    GCES01053992    JAR32331.1    AFYH01270921    BC124029    AAI24030.1    AAMC01039569    GCES01121401    JAQ64921.1    AFYH01054001    RJVU01050255    ROL42159.1    CM004466    OCU01160.1   
Pfam
PF02351   GDNF        + More
PF08373   RAP
PF01483   P_proprotein
PF08368   FAST_2
PF04547   Anoctamin
PF16470   S8_pro-domain
PF08737   Rgp1
PF00082   Peptidase_S8
Interpro
IPR039596   GAS1        + More
IPR016017   GDNF/GAS1       
IPR015500   Peptidase_S8_subtilisin-rel       
IPR038466   S8_pro-domain_sf       
IPR013579   FAST_2       
IPR000209   Peptidase_S8/S53_dom       
IPR008979   Galactose-bd-like_sf       
IPR036852   Peptidase_S8/S53_dom_sf       
IPR006212   Furin_repeat       
IPR014848   Rgp1       
IPR023827   Peptidase_S8_Asp-AS       
IPR002884   P_dom       
IPR007632   Anoctamin       
IPR009030   Growth_fac_rcpt_cys_sf       
IPR022398   Peptidase_S8_His-AS       
IPR032815   S8_pro-domain       
IPR034182   Kexin/furin       
IPR013584   RAP       
IPR023828   Peptidase_S8_Ser-AS       
IPR037193   GDNF_alpha       
SUPFAM
SSF57184   SSF57184        + More
SSF52743   SSF52743       
SSF49785   SSF49785       
SSF110035   SSF110035       
Gene 3D

Ontologies

Topology

SignalP
Position:   1 - 16,         Likelihood:  0.990148
 
 
Length:
238
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
8.43542000000001
Exp number, first 60 AAs:
3.47239
Total prob of N-in:
0.12290
outside
1  -  238
 
 

Population Genetic Test Statistics

Pi
160.71049
Theta
150.551557
Tajima's D
0.043166
CLR
106.908597
CSRT
0.378181090945453
Interpretation
Uncertain
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