SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11437
Pre Gene Modal
BGIBMGA001889
Annotation
PREDICTED:_piggyBac_transposable_element-derived_protein_3-like_[Amyelois_transitella]
Location in the cell
Nuclear   Reliability : 3.332
 

Sequence

CDS
ATGTCGCTAAGAAGATTGCGTGATGAAGATATTGAAGGTTTCTGGGATATTCCTTCTGGGAGTGAAGATGGTCAAGATTTTTCTGATGCTGAAAGTGATGATGACATCGAAAAGCATATTGGAGAAGATATTCAGCATATGCACAAATTTAGTGTCCAAAAAATTCTTCAAAGAAAATGGTACTTGAGGCTATTTTATCATCTTCTTGATGTAACCCTTGTCAATTGCTGGTTATTGTACAGAAGAGTCGGAGAGCAGCAGCATATACCAACCCCAATGAAACCGAAGGACTACAAATTTGAAGTAGGGAAAAGTTTATGCATAGACCAAGTTTATCTGATGAAGTTGAAAACAAAAGACAGAAGCCAAATACATCAATCCTACCTCCGCGTGATGTCAGGCGCGATGGGTTTGAGAATTTTCCTGTTTGGGGTCAAAAAAGACAACGATGCAAATATCCTGGTTGCAAAGGAAATACATTCATATCTTGCAACAAATGTTGCGTAG
Protein
MSLRRLRDEDIEGFWDIPSGSEDGQDFSDAESDDDIEKHIGEDIQHMHKFSVQKILQRKWYLRLFYHLLDVTLVNCWLLYRRVGEQQHIPTPMKPKDYKFEVGKSLCIDQVYLMKLKTKDRSQIHQSYLRVMSGAMGLRIFLFGVKKDNDANILVAKEIHSYLATNVA

Summary

Uniprot
ProteinModelPortal

Ontologies

GO

Topology

Length:
168
Number of predicted TMHs:
0
Exp number of AAs in TMHs:
5.58859
Exp number, first 60 AAs:
0.06946
Total prob of N-in:
0.33422
outside
1  -  168
 
 

Population Genetic Test Statistics

Pi
308.163532
Theta
198.558632
Tajima's D
2.002814
CLR
0
CSRT
0.885405729713514
Interpretation
Uncertain
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