SGID Silkworm Genome Informatics Database
Gene
KWMTBOMO11436  Validated by peptides from experiments
Pre Gene Modal
BGIBMGA001935
Annotation
PREDICTED:_dystroglycan_[Amyelois_transitella]
Location
Bomo_Chr19(-):5601908-5665423      View in EpiBrowser
Location in the cell
Nuclear   Reliability : 3.842
 

Sequence

CDS
ATGGGGTGCGCAAGGTACATCGCGTGCGCGCTACTCTTGCTGTGTCCTCTTGCTCTCAGTCGGCACGACGACGACTTCGCTTTCGACAATAGCGAAGAATTCCAGGTTGAATTAACGGCAAACCACTCAGAGATAGCTAAGAATGGCCTAAGGAGATTATGGGGTGTACCCGACACGTTGGCCTATGTAGGACACCTGTTCCGCATGGAAATCCCCAAGGAAGCGTTCTCCGGAAAAGTTGTTGCTTATAAAGTTCGCAGCGACCACGGGAGGCGTACACCGAACTGGCTGGCGGTGGATTCGAGGCACGGTCTTATTAGCGGTATCCCACAGTACCAGGACATTGGAACTCACACATTCACCGTCACCGCTCACGGAACTACCAAAGGACTCACTGCAACCGATTCATTCACTATCGAGGTGAAAAAGGGTGAAGACAAACCTCATTCGAAATACGGGACGTGCATCGGAGATGAGAACAGGCTGGTTCTCCTTATTCTGGTTGACGGAGCGTTCCACAAGATCGTGCCTCGACAGAGAATAAGAGCCCTGATGCAACTCGCAAACTTTATGGCTCTTGATGGGGACGAATTTTGGATGGAACCTTACAAGACTGAAACGCATCCGGACACGATATTAAGCGGAATCGGTTCTTCATTGAGGAAACGAGGCGATGCCACAACCGCCATATATTTGAACGTCGGCTGCGGGAACAAGCTGTGGGATCGGCACAAGGTGCTGGTGGCGGGGCTGCGCGAGCAGTCGCGCGACGGAACGCTCGAGCAGCTGCTGCGGCTGCCCGTCATCGGCTGGAGACTCCTGGCCGTCAAGCCCACGTTCAGAGTCAAACGACAGTCCCCGATGGAGGGGTCGGGCGACATGTACGACGCGGAGTACGACGGCGACGACGACGCGGACTACAGCGGCTACGACGACGACAACGACGACCTGAACTTCGAGGACGCGCGCCGGAACGATGTCGGCGTACCGGAGCTGGACGAAGACCACGACGTGAAGATAACGCCTTACTCCGAATCTGCTTCGGAAACAAACAACATAACGTTTGTGCCGGTGTCATCGAGACATCTAGAGGACGTTGCCATTGTGCCAGATTACATTCCAACCACGACGGAACCGGAAATGCAAACCGTTATGATACGCGCGTCAAACGAACTGCCGCCTTTGTCGTCCGAGTCGCCCCCGACCGTGACGTCACAGTCCCCCGAGCCACCCACGCAGCCGATTACCACATCCTCTACGACGACGTCTACGACCACCCAAGCTCCGGCCACGACGCCGGTCACTGTTCCGGTTACGACGCCTGTGACTACGCCGGTGACTACGCCAGTCGCTACGCCGCCGCCCACTACGACGACCAGCACTACGCCGATGACCACTGTACCGACAACGGTACCGACTACAACCGATCCACCAGAAACCACTATACAGGAGGTCACCAAACAGGAGTCCACTGTGACGGAGGGTAAGAGCACAATAATTGGTCAAACCACGGAGACGGTGACCTTCGCGATGCCTGTCAACCAACCACCGGTCCTCAAACATCACATGAAGAAACTCGCTATAACTGCTGGAAAAGCCTTTAGATACATAATCCCCACCGATCTGTTCATGGATCAGGAGGACGGGAGCAACTTGACTTTCACGATGTACGAAGCCGAAAACGTCCCCTTAAGCAAAAACTCATGGATACAATTCATACCGTCCGACCTTGAAGTTTACGGACTACCGCTGGAAGCCCACGTCTCACGTTGGAACTTCATAGTGGAAGCTCAGAACAGCGCCGGCCTCAAGGCCCGGGGCCCGCTAGACATCACCGTGCAGCAACACAAGAGCGGACGCACCATCAACCACCGCTTCATCATGCAGTTCACGCTGCTCAAGCAGTACAATAACGCCATCGACTGGCAGATAAGGGCCTTGGAGGGAATAGTGAATCTGTTCCGGGACACCGACATGGACCATCTGACCGTGTTGAACGCGACCCAAACGGGAGATCTCTGCGAGTTCGTTTGGACGAACGATACCCTGCCGAAAGACGCGGCCTGTCCTATGGATGACATCAATAGACTTATGAAGATAATGGAGTCTGAGTCGGAGCCGGGTCGCGGGTCCCGCTTGTTGTCGCGCGCCATGTCCCCGGAGCTGGGCGTGCGCGGCGTGCGGTGGGAGGGGGCGGGGGTGTGCGCCGCGCCGCCCGCCACCCGCGCGCCCGACACCTACCCGCCCGTCACCCGCAACCAAGTCGACCACATCACTGCCTCCGCCGGACACCTGCTCGTCTACAAAGTGCCCGAGGACACATTCTTCGACCCAGAAGACGGAGGCACCCGTAACCTCATACTGTCGCTACGGTACAGCGACCGCACCGAGATCCCGGCCGGGCACTGGCTACAGTTTGACGCCAATAACCAAGAGTTCTACGGCTTGCCCACTACTACGGACGAGGGCAGCGTTTCTTATCAACTGATTGCTGAAGACTCCAGCAAGAAGACTGCGTACGACAGTTTAATAGTGGAGGTCGTGAAGGCGCCTCCAATCCGACCCACGGTCGAGTTCCAGATGACCTTGGAGTATCCGTTCTTGAAGCTCGCCTTCAACGCTAAAAACAAGCGTAAAGTTGTCGAGAAGCTCGCCAACCTGTTTGGACAAAAGGAGACTGATAATATTAGGATACAAAGCATTACCAATAATCCTACCTCCATTATATGGTACAACACTAGCTTGCCAATGGACAGATGCCCGAAGGCGGAAATCGAGCAACTCCGCAAGATGATCATCGTGGATGATCGCGGCTCACGAGGAGGCGCTCTCCGCGAAAACGTCGATCAAGTCTTCGACAAGGACTTCAAAGTGATGTCGATAACCCTCAACCCGCTCGGCCTGTGCGCGGAGCAGAACACCAAAGTATCGAAGGTCCCACCGGCGCTGTACCCCGGCGCGCCCAACTCGCAGAACAGCAAGACAGGCAGCGCCGCGGAGCAGAGCTACCTCGTGACGTTCATCATCCCGGCCGTGGTCATCGTGTGCATGATACTGCTGGCCGGCGTCATCGCCTGCGTGCTGTACCGGAGGCGGCGGACAGGTAAAATGAGTGTCGGCGACGAGGAGGAGCGACAAGCGTTCCGTTCGAAGGGCATACCCGTTATATTTCAAGACGAATTAGAAGAACGTACAGACACCGAACCTATACACAAAAGTCCTGTTATAATGCGCGAAGAGAAGCCGCCATTGTTGCCGCCCGCACCGGACTACAGATCGGGCGAGGATGCCCCGTACCGTCCGCCGCCGCCATTCGCCGCGTCCCGCACTCCGCCGCGACCCAAAGCCACACCTACCTACAGAAAACCTCCGCCATACTCATCGAAAATGCAATTATTGGAAAGCTTACGAATTTCTCTGAAACGACGACCACAAATGATTGAATTGATCATGAGTATGAGAAAGTGTATTAAAAAGAAGAACGTTGTCATAAAAAAATTAAAACAATGTTTGAAAGAAAAGAACGTCAGAACAACATCCATAAATGCATCTTCTCAAAACAACGTGTTCGAATTGAATATTCCACACAGCAGTGAAAATGAGACGCCAACCTCAGACAATGACAACCAATCTTTAAAAAATACCAAGTCCACGCAAACACCTAAAGTAAAAACAAGCGATACTGCGACACAAATGGAGACAATGAAAACAAAAAAATGTGAGGAAAGCCTAGAAGCGGGATGGAATTTGCATGATGGTTCAGGAGAGATGTCTCTTGCCGAGCAAGTGAAAGAGGTGGCCCAGACTGCCTTGCAGCAGACAGGGATGGTGTATGTTGAGTCAGCAGGCATGTACTACGATTACAAGACTGGTTATTATTATAATTCTGAACTGGGTCTCTACTATCATACCGATACCAATTGCTATTACTACTATTCAGACGAGAAGCAGAGCTTTGTCTTTCATTCTTATCCTGATAGTAGCATCGAGAATCCTGGTTTAGTTGCTCATAATAAAAAGAAAGCTAGAAAGCACAAAGCTGTACAACTAAAAGAAGATGTCATGGAAAACCTGACGAAAAACTTATCTCAGGAAAATGAAGACAGCCACCTTAGGCTGAAGCAGAGGAAGATTTCAAAAGTTAAAGAATCCAAGAATAAAAAACCTTTTAAAGCTAAAATTGATGAAAATGGTGATCAATCTATAGAAAATAATGGTGAAAAATGTGATGTTATGGAGTTAGAAGACAAAGAACAAAATAGTGAAGACACACAGGACACCAGCAAGAAGGACAACAAGGCATCCAGGGATCTCGAAGATGGAGAATGCAGTGATTCAGCTGATGAAGACTCTGGGTCAGACAATGAATGTTCATCTAATGCCAGCACATCCACATTAACTGATGATGAAAATGTTGCAAAACACCATCCACCGTGTATGCGCGTGATCGTCAGGGAAACTAGTCTACCCAAACTGAAAATTGGAAATCTTTTCCTGATAACGAAAGATGGCGGCACGATCGGAAGGGAAGGGGAGCAACACGCTATTGTTTTAAAAGACCACAACGTGTCTAGGAATCATTTGGACATTCAATACGACCTCGCACGACAGACGTACACCGCTGTGGATCTAGGATCTAAGAACGGAACGATACTGAACGGCATCAGAATGTCTGAGAGTCAAGTCGTCAGCAAACGCGTCGATGTCGTTCATGGCAGCACGATACACATAGGCGAGACTAAACTGCTGTGCCATGTGCATCCGGGAAATGACACCTGTGGCCACTTAGAGGAGCGAGAGAAGAAAGTCGCGTACACGCGCACGTGCAGCGTGCAGCGGCAGCACCAGCTCGAGCTGGCGCGGCTGAAGAACAAGTACGCGCCGAAGGTGCTGAGCATCGAGGAGACGGCGTACAACGACCGCGCGCAGGCCCGCCGCGACGCCGTCGGCTCCTCGCACGAAGCCGAGAAAACGCAGACTACAGACCTCGACACGTTTATCGCGCCCGAGAATAAAGGTTTCCGGCTACTAGAGAAGATGGGCTGGTCCAAAGGCGAAGGACTCGGGAAGGACAGCCAGGGAGAAATAGAACCGGTAAGTACATAA
Protein
MGCARYIACALLLLCPLALSRHDDDFAFDNSEEFQVELTANHSEIAKNGLRRLWGVPDTLAYVGHLFRMEIPKEAFSGKVVAYKVRSDHGRRTPNWLAVDSRHGLISGIPQYQDIGTHTFTVTAHGTTKGLTATDSFTIEVKKGEDKPHSKYGTCIGDENRLVLLILVDGAFHKIVPRQRIRALMQLANFMALDGDEFWMEPYKTETHPDTILSGIGSSLRKRGDATTAIYLNVGCGNKLWDRHKVLVAGLREQSRDGTLEQLLRLPVIGWRLLAVKPTFRVKRQSPMEGSGDMYDAEYDGDDDADYSGYDDDNDDLNFEDARRNDVGVPELDEDHDVKITPYSESASETNNITFVPVSSRHLEDVAIVPDYIPTTTEPEMQTVMIRASNELPPLSSESPPTVTSQSPEPPTQPITTSSTTTSTTTQAPATTPVTVPVTTPVTTPVTTPVATPPPTTTTSTTPMTTVPTTVPTTTDPPETTIQEVTKQESTVTEGKSTIIGQTTETVTFAMPVNQPPVLKHHMKKLAITAGKAFRYIIPTDLFMDQEDGSNLTFTMYEAENVPLSKNSWIQFIPSDLEVYGLPLEAHVSRWNFIVEAQNSAGLKARGPLDITVQQHKSGRTINHRFIMQFTLLKQYNNAIDWQIRALEGIVNLFRDTDMDHLTVLNATQTGDLCEFVWTNDTLPKDAACPMDDINRLMKIMESESEPGRGSRLLSRAMSPELGVRGVRWEGAGVCAAPPATRAPDTYPPVTRNQVDHITASAGHLLVYKVPEDTFFDPEDGGTRNLILSLRYSDRTEIPAGHWLQFDANNQEFYGLPTTTDEGSVSYQLIAEDSSKKTAYDSLIVEVVKAPPIRPTVEFQMTLEYPFLKLAFNAKNKRKVVEKLANLFGQKETDNIRIQSITNNPTSIIWYNTSLPMDRCPKAEIEQLRKMIIVDDRGSRGGALRENVDQVFDKDFKVMSITLNPLGLCAEQNTKVSKVPPALYPGAPNSQNSKTGSAAEQSYLVTFIIPAVVIVCMILLAGVIACVLYRRRRTGKMSVGDEEERQAFRSKGIPVIFQDELEERTDTEPIHKSPVIMREEKPPLLPPAPDYRSGEDAPYRPPPPFAASRTPPRPKATPTYRKPPPYSSKMQLLESLRISLKRRPQMIELIMSMRKCIKKKNVVIKKLKQCLKEKNVRTTSINASSQNNVFELNIPHSSENETPTSDNDNQSLKNTKSTQTPKVKTSDTATQMETMKTKKCEESLEAGWNLHDGSGEMSLAEQVKEVAQTALQQTGMVYVESAGMYYDYKTGYYYNSELGLYYHTDTNCYYYYSDEKQSFVFHSYPDSSIENPGLVAHNKKKARKHKAVQLKEDVMENLTKNLSQENEDSHLRLKQRKISKVKESKNKKPFKAKIDENGDQSIENNGEKCDVMELEDKEQNSEDTQDTSKKDNKASRDLEDGECSDSADEDSGSDNECSSNASTSTLTDDENVAKHHPPCMRVIVRETSLPKLKIGNLFLITKDGGTIGREGEQHAIVLKDHNVSRNHLDIQYDLARQTYTAVDLGSKNGTILNGIRMSESQVVSKRVDVVHGSTIHIGETKLLCHVHPGNDTCGHLEEREKKVAYTRTCSVQRQHQLELARLKNKYAPKVLSIEETAYNDRAQARRDAVGSSHEAEKTQTTDLDTFIAPENKGFRLLEKMGWSKGEGLGKDSQGEIEPVST

Summary

Uniprot
NA  
ProteinModelPortal
NA  
PDB
4WIQ     E-value=3.65729e-10,     Score=162

Ontologies

KEGG
101744729    no KO assigned | (RefSeq) angiogenic factor with G patch and FHA domains 1
GO
GO:0016020   GO:0003676   GO:0005509   GO:0005515   GO:0007016   GO:0016010   GO:0016740   GO:0003707   GO:0006418   GO:0003824  

Topology

SignalP
Position:   1 - 20,         Likelihood:  0.987259
 
 
Length:
1701
Number of predicted TMHs:
1
Exp number of AAs in TMHs:
23.79704
Exp number, first 60 AAs:
0.48298
Total prob of N-in:
0.02949
outside
1  -  1006
TMhelix
1007  -  1029
inside
1030  -  1701
 
 

Population Genetic Test Statistics

Pi
243.840195
Theta
19.583057
Tajima's D
0.726411
CLR
0.191243
CSRT
0.587170641467927
Interpretation
Uncertain
Peptides ×
Source Sequence Identity Evalue
31250652 GCVISGGETAEMPSMYEVGKYDLAGFAVGVVDNR 100.00 1e-06
26822097 YGTCIGDENR 100.00 5e-04
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