Gene

KWMTBOMO11427

Pre Gene Modal

BGIBMGA001885

Annotation

Zyxin/trip6_[Operophtera_brumata]

Location

Bomo_Chr19(+):5402574-5404083      View in EpiBrowser

Location in the cell

Extracellular   Reliability : 2.202 Nuclear   Reliability : 2.44

CDS

ATGCACATTCAATTACCACCCCCTCCACCACCACCACCATTAACTACACACACAACATTGCAGGCTCCTCTAGGAACACACAATCTACAATATATGACACTGCCATTACCTAATCCTTCTTCAGGAGTCCACCAGGAATATATGATGCCAGTATTGTCCAAGTCTCCTGTAACTACAAACAGTGAGGAGTATATGCCACCCCCATCACCAAATAATTTCCCTGAATACAACATGTCACAAGCTCCAACATATGAATCATTCTATGAACCAATCAGTCCACATCCCTCCAGTAAGACAGCAATGCAAGAAAATAATTTAATTACAAAGAAAGAAGCTTTATCTAAACGATCACCATTGCCCAAGGAACAAGAAGTAGATGCTTTGACAAATCTGCTGGTACAATCAATTACAGACAGTCAAGATTTAGATGTCTTTGGAATATGTGTGAAGTGTGGTGAACGAATTTCTGGAGAAAACGCAGGCTGTACAGCTATGGGAAACACTTATCATGTTCACTGTTTCACTTGTCAACGTTGTAATGTAAATCTCCAAGGAAAACCATTCTATGATGTTGAGAATGAACCGTATTGTGAAGCTGATTATTATGACACATTAGAAAAGTGCTGTGTTTGCCGAAAAATAATTTTAGATCGTATTCTACGTGCTACTGGAAAACCTTATCATCCAACTTGTTTTTCTTGTGTAGAGTGTGGTAAAAGTTTAGATGGGATACCGTTTACAGTTGATGCCATGAACCAAATCCATTGTATTGATGACTTCCATAAGAAATTTGCACCACGTTGCTGTGTATGTGAACTACCAATTATGCCAGAAGAAGGTCAAGAGGAAACTGTGAGAGTTGTTGCCTTGGACCGTAGTTTCCATGTTAAGTGTTACAGGTGTGAAGATTGTGGCTTACTGTTGAGTTCAGAAGCAGAAGGTCGAGGTTGTTATCCACTTGACGATCATATACTTTGTAAAACTTGCAATGCACGTCGTGTTCGTCTTTTGACTAATGTTATGACTACAGACTTATGA

Protein

MHIQLPPPPPPPPLTTHTTLQAPLGTHNLQYMTLPLPNPSSGVHQEYMMPVLSKSPVTTNSEEYMPPPSPNNFPEYNMSQAPTYESFYEPISPHPSSKTAMQENNLITKKEALSKRSPLPKEQEVDALTNLLVQSITDSQDLDVFGICVKCGERISGENAGCTAMGNTYHVHCFTCQRCNVNLQGKPFYDVENEPYCEADYYDTLEKCCVCRKIILDRILRATGKPYHPTCFSCVECGKSLDGIPFTVDAMNQIHCIDDFHKKFAPRCCVCELPIMPEEGQEETVRVVALDRSFHVKCYRCEDCGLLLSSEAEGRGCYPLDDHILCKTCNARRVRLLTNVMTTDL

Uniprot

H9IXA2   A0A1E1W6Y1   S4NY13   A0A2A4K5Z5   A0A0L7L412   A0A194QEV7   + More
A0A212FGX6   A0A2H1V5H7   A0A2Z5U7Z0   A0A1Y1MR98   A0A1W4XMI9   T1DKK8   Q171B9   A0A1S4FHA2   A0A182F561   A0A2M4BG54   A0A2M4AQ32   A0A182GEL0   A0A1B0CX89   D2A3T5   W5J4L5   A0A2M4BG61   A0A182J501   T1H9J0   A0A336M6W7   A0A084VPH1   A0A2M3ZAY4   A0A2M3Z2H6   A0A2M3Z3D3   A0A2M3Z2N2   A0A0A9XTN0   A0A023F380   A0A0V0G9Q6   A0A069DTQ5   A0A2M3Z281   A0A2M3ZA16   A0A2M3Z320   A0A224XPZ5   A0A1L8DLK4   A0A1L8DLT3   A0A1B6DVF7   A0A182Q5P5   A0A182NEF9   A0A182VUY1   A0A182MHQ7   A0A182S4R8   U5EQQ5   A0A182Y5V3   Q7PSB2   A0A182T6N0   A0A182K0N6   V5GKM8   A0A3Q0JIW9   A0A182PD82   A0A0C9PZR3   A0A182UNF5   A0A0J7KRI2   A0A2A3EC25   A0A182IE52   A0A088ARC6   A0A182L5M0   A0A293LXZ7   A0A195CCW0   A0A182X7L5   A0A0M9A193   E0VNM2   A0A131Y0K9   A0A1B6LA22   A0A1B6HLK0   A0A154PIT7   A0A195DP55   A0A1A9XW04   N6U3C0   A0A131XHM1   A0A147BVL2   A0A0L7REP7   A0A1B0AP46   E2AP54   F4W4G5   A0A151WZG6   A0A195EZ42   A0A158P364   A0A224Z213   A0A131YYB4   B0W5S3   A0A195BIH7   E2C3I3   A0A026WV63   T1JE70   A0A1A9UXH7   A0A1E1XBJ0   A0A1B0FII6   A0A1A9Z7Q3   A0A1Q3F6A1   A0A1Q3F6F5   A0A1E1XM69  

Pubmed

19121390    23622113    26227816    26354079    22118469    28004739    + More
17510324    26483478    18362917    19820115    20920257    23761445    24438588    25401762    26823975    25474469    26334808    25244985    12364791    20966253    20566863    23537049    28049606    29652888    20798317    21719571    21347285    28797301    26830274    24508170    30249741    28503490    29209593   

EMBL

BABH01018077    GDQN01008298    GDQN01004232    JAT82756.1    JAT86822.1    GAIX01013980    + More
JAA78580.1    NWSH01000136    PCG79193.1    JTDY01003160    KOB70039.1    KQ459053    KPJ03954.1    AGBW02008579    OWR53001.1    ODYU01000592    SOQ35642.1    AP017509    BBB06821.1    GEZM01023896    JAV88159.1    GAMD01000901    JAB00690.1    CH477460    EAT40570.1    GGFJ01002898    MBW52039.1    GGFK01009559    MBW42880.1    JXUM01058229    KQ561993    KXJ76959.1    AJWK01033441    AJWK01033442    KQ971348    EFA05566.2    ADMH02002089    ETN59402.1    GGFJ01002899    MBW52040.1    ACPB03022132    UFQT01000212    SSX21768.1    ATLV01015004    KE524999    KFB39865.1    GGFM01004955    MBW25706.1    GGFM01001970    MBW22721.1    GGFM01002271    MBW23022.1    GGFM01002023    MBW22774.1    GBHO01023114    GDHC01008073    JAG20490.1    JAQ10556.1    GBBI01003009    JAC15703.1    GECL01001536    JAP04588.1    GBGD01001431    JAC87458.1    GGFM01001862    MBW22613.1    GGFM01004591    MBW25342.1    GGFM01002087    MBW22838.1    GFTR01006357    JAW10069.1    GFDF01006748    JAV07336.1    GFDF01006749    JAV07335.1    GEDC01031088    GEDC01007657    JAS06210.1    JAS29641.1    AXCN02000859    AXCM01006443    GANO01004152    JAB55719.1    AAAB01008839    EAA05908.5    GALX01003832    JAB64634.1    GBYB01007048    JAG76815.1    LBMM01003957    KMQ92953.1    KZ288308    PBC28749.1    APCN01004564    GFWV01008813    MAA33542.1    KQ977935    KYM98699.1    KQ435791    KOX74326.1    DS235340    EEB14978.1    GEFM01004385    JAP71411.1    GEBQ01019429    JAT20548.1    GECU01032148    GECU01013051    JAS75558.1    JAS94655.1    KQ434931    KZC11796.1    KQ980713    KYN14269.1    APGK01044250    KB741021    ENN75111.1    GEFH01001968    JAP66613.1    GEGO01001029    JAR94375.1    KQ414608    KOC69427.1    JXJN01001129    GL441452    EFN64790.1    GL887532    EGI70860.1    KQ982649    KYQ53091.1    KQ981905    KYN33575.1    ADTU01007761    GFPF01009457    MAA20603.1    GEDV01005391    JAP83166.1    DS231844    EDS35726.1    KQ976467    KYM84172.1    GL452320    EFN77521.1    KK107087    QOIP01000001    EZA59940.1    RLU27270.1    JH432116    GFAC01002620    JAT96568.1    CCAG010022166    GFDL01011968    JAV23077.1    GFDL01011987    JAV23058.1    GFAA01003024    JAU00411.1   

Proteomes

UP000005204    UP000218220    UP000037510    UP000053268    UP000007151    UP000192223    + More
UP000008820    UP000069272    UP000069940    UP000249989    UP000092461    UP000007266    UP000000673    UP000075880    UP000015103    UP000030765    UP000075886    UP000075884    UP000075920    UP000075883    UP000075900    UP000076408    UP000007062    UP000075901    UP000075881    UP000079169    UP000075885    UP000075903    UP000036403    UP000242457    UP000075840    UP000005203    UP000075882    UP000078542    UP000076407    UP000053105    UP000009046    UP000076502    UP000078492    UP000092443    UP000019118    UP000053825    UP000092460    UP000000311    UP000007755    UP000075809    UP000078541    UP000005205    UP000002320    UP000078540    UP000008237    UP000053097    UP000279307    UP000078200    UP000092444    UP000092445   

PRIDE

H9IXA2   

Pfam

PF00412   LIM        + More
PF08941   USP8_interact

Interpro

IPR001781   Znf_LIM        + More
IPR001841   Znf_RING       
IPR015036   NRDP1       
IPR013083   Znf_RING/FYVE/PHD       
IPR037255   NRDP1_C       
IPR003613   Ubox_domain       
IPR017907   Znf_RING_CS       
IPR008974   TRAF-like       

SUPFAM

SSF49599   SSF49599        + More
SSF160088   SSF160088       

Gene 3D

3.30.40.10    

ProteinModelPortal

H9IXA2   A0A1E1W6Y1   S4NY13   A0A2A4K5Z5   A0A0L7L412   A0A194QEV7   + More
A0A212FGX6   A0A2H1V5H7   A0A2Z5U7Z0   A0A1Y1MR98   A0A1W4XMI9   T1DKK8   Q171B9   A0A1S4FHA2   A0A182F561   A0A2M4BG54   A0A2M4AQ32   A0A182GEL0   A0A1B0CX89   D2A3T5   W5J4L5   A0A2M4BG61   A0A182J501   T1H9J0   A0A336M6W7   A0A084VPH1   A0A2M3ZAY4   A0A2M3Z2H6   A0A2M3Z3D3   A0A2M3Z2N2   A0A0A9XTN0   A0A023F380   A0A0V0G9Q6   A0A069DTQ5   A0A2M3Z281   A0A2M3ZA16   A0A2M3Z320   A0A224XPZ5   A0A1L8DLK4   A0A1L8DLT3   A0A1B6DVF7   A0A182Q5P5   A0A182NEF9   A0A182VUY1   A0A182MHQ7   A0A182S4R8   U5EQQ5   A0A182Y5V3   Q7PSB2   A0A182T6N0   A0A182K0N6   V5GKM8   A0A3Q0JIW9   A0A182PD82   A0A0C9PZR3   A0A182UNF5   A0A0J7KRI2   A0A2A3EC25   A0A182IE52   A0A088ARC6   A0A182L5M0   A0A293LXZ7   A0A195CCW0   A0A182X7L5   A0A0M9A193   E0VNM2   A0A131Y0K9   A0A1B6LA22   A0A1B6HLK0   A0A154PIT7   A0A195DP55   A0A1A9XW04   N6U3C0   A0A131XHM1   A0A147BVL2   A0A0L7REP7   A0A1B0AP46   E2AP54   F4W4G5   A0A151WZG6   A0A195EZ42   A0A158P364   A0A224Z213   A0A131YYB4   B0W5S3   A0A195BIH7   E2C3I3   A0A026WV63   T1JE70   A0A1A9UXH7   A0A1E1XBJ0   A0A1B0FII6   A0A1A9Z7Q3   A0A1Q3F6A1   A0A1Q3F6F5   A0A1E1XM69  

PDB

2DLO     E-value=1.8815e-20,     Score=244

KEGG

101747095    K16676 lipoma-prefererred partner | (RefSeq) lipoma-preferred partner homolog

PATHWAY

04391    Hippo signaling pathway - fly - Bombyx mori (domestic silkworm)

GO

GO:0046872   GO:0001725   GO:0098609   GO:0005925   GO:0061630   GO:0008270   GO:0000166   GO:0016020   GO:0005216   GO:0006811   GO:0008152   GO:0016740   GO:0003707   GO:0006418   GO:0003824  

Length:

345

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00106

outside

1  -  345

 

 

Pi

218.946427

Theta

185.829057

Tajima's D

0.630716

CLR

0

CSRT

0.552222388880556

Interpretation

Uncertain