Silkworm Genome Informatics Database

Gene

KWMTBOMO11425 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001884

Annotation

PREDICTED:_uncharacterized_protein_LOC106132531_[Amyelois_transitella]

Location

Bomo_Chr19(+):5377114-5388021 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.345

CDS

ATGTCGACTAGGAGAGCGAGAATAAAAGCTGTAGCGGCACTTCCGCCTCGTAGGAAAAATGCTGAAAACTCGGAGAATAAGAATCAACAAGGCCCAAGTACTAATGATCTTCAGAACGTTCCAAAAAGTCCAAATGCTACTAAACATGACAATGTGGCAAAGACATACCAGCGTGCTTCGGTTGCTAATTCACCATCGAAATCTCCACATAGTAGTGTGATAACGCAGAATACAGATAGACAACCTCATGTTAATAGAGCTGCAACACCGGTTAACAAAGGGAACATAACTCCTAAGCTATCTGATAGAGTGTCGGTAATTACTTCTACTGCAGGGGTTAAATCCGGTGTTTTTGCATCTCCTCACGCTAAAAGTAGCCCTTTAAGGAAATACATACCGTCACCAGTGCTGGCTGCAATGAATACGGCTGAAGTAACTAATAAAGCGGTTACTCCTGAAAAAAGTGATGCAAAAAAGAATAGTGATAGTACAAAGTCTATTGGGAATAACAGTACTGAGATTATACAAAAGATCAGTGATTCTGAAAGTTCTACGAGTAAAAGTGGCACAAACACACATAGAAGTGACATTCCAGATGATTATAGTGTACCAAGTGTACCTGAGAGTATCACAGAAGATCCTATGGATGGTATTGTACCTCTACAGCCAGTTAGTGCACCAAAACCAATAGCTTTGCTCAAAAATGAGATTATATCAGAAAATGTGGAGGTTCTGTTTGATCCCATTGTACCTCTGCCTTCACCCAGCAAAGTGCGACCAAAGCTACGGCCCGTGCCTCGATTGGGGCCCCTAAGAAGGAACAGTGTGCAGGGGAGTGCGAGTGAGTCTGAAGATGAAAGTCGTCGTTCGTTGCTGGGTCACAGATCAGCGACGCCGTTACCGATGCGACAGCGACACGACTCTCACACCACGCAACACTCGAATTTAAACCAAGATACAAATAGAACGAGAAATGATTCAATTTGTTCTGTCGTCAGTCAACCGACGACTGCCAATCCAGCTTTATCTCCCACCAAAGAAAAGCATTACCAAACAAAGACTCGAAGACAGGAGATGAGTCGCCGTATGGCCGCTATGCGTCGGCGCCGGGAGACTGCCCAGCGCGATACGATGACCATGTACGACCTCATATTCCACAACCCCTCCACCAACCCTATGATTCCAGATCAAGACGAAATCAAAGCTCAAGAGGCGAATAAAGCATCACAGAATCAGCCTGACGAGAGCGAAAATGACGACCCGAACGATCCGCCTTCGACGGGCGCGGCTCCCGTGCCACAGATCAAACTAGGTCCCAACGGCGAAATTATACTGGACGAACAGAGTTTGGTTATAAAGCAGTCGAACAACGGGCGTAAAGTGTCGAGCGAGGTCCGCGAGGGCGCGTGGAACGAGCGCTCGAGCGGCTACCGGCGCAGCGCGCGCACCGCCGACTGGACGCACGACGAGACCGTGCGCTTCTACCGCGCGCTCGCCGCCATCGGGACAGACTTCACGCTCATGGAGCCCCTGTTCCCGGGCAGGACCAGGCGGGACCTCAAGCTTAAGTTTAAAAAAGAAGAGAAACTGAATATAGCCCAAGTCGACAAAGCTTTAAGATCTCGCGTTGAATGGGACGCTATGGGGCTTCACGAAGAGTTTAAGGAGGAACGAGCAGAGGCCGCTAAAAGAGAAGAAGAGGCAAAACAGCGACTGGAGAAGCAGAAGAAAGAGAGGCAGGAAAGAAACAAAGAACTACGGGGATATAGACAGAGTATGAGCAAAAAACTGTTAGAGTCGTCAGTCCTGCGATGCGATTTGAGCAACGTAGATCACACGGCGGACGACATAATAGCTCGAGCGTCCGAGTTCAAGTCGCAAAAGAAACGTAAACCAAAAAAATCTATCGGTCAAAAACCAAAACCTGAGCCGGGACCTGGTTCGACATCGTCCCTGGCAACCCTGTCTGTGAGAAACAATAGAAAAACACAAGAATCAAAGAACAGCGTCAGCGACATGGCCGTCATAACTAAAATAGATCCAAAACCGGCCAATATGTTGTTGGATAATATTAGCAATCCTTCTATGCCGTCGAACATTGAGACAGGATCGTTGGTCGTGTTGACGGTCAACGACCCCAATTCGCCGACAAAGAAAATGTTGCAAACCTACATAGCGCGGGAGAAAGGGAAGCTTTTGCCTGTCGATTTACCTCCTTCACTATTGAACTCTGTAGTCGGTTACGTACGAAAAGAAACAACGGACAGTAACGCGTCTATGGTGTCTTCGCCTATGACATCGGCCTCGCCGAACAGTGTTGCCAGTATGGATAGCAGAATCAGTGTTACTCCATTACAGGTAAACCCAAGTCCAAATAAGCGACAAAGGAAAAATTCATATACAATTACGCCTCTCTAG

Protein

MSTRRARIKAVAALPPRRKNAENSENKNQQGPSTNDLQNVPKSPNATKHDNVAKTYQRASVANSPSKSPHSSVITQNTDRQPHVNRAATPVNKGNITPKLSDRVSVITSTAGVKSGVFASPHAKSSPLRKYIPSPVLAAMNTAEVTNKAVTPEKSDAKKNSDSTKSIGNNSTEIIQKISDSESSTSKSGTNTHRSDIPDDYSVPSVPESITEDPMDGIVPLQPVSAPKPIALLKNEIISENVEVLFDPIVPLPSPSKVRPKLRPVPRLGPLRRNSVQGSASESEDESRRSLLGHRSATPLPMRQRHDSHTTQHSNLNQDTNRTRNDSICSVVSQPTTANPALSPTKEKHYQTKTRRQEMSRRMAAMRRRRETAQRDTMTMYDLIFHNPSTNPMIPDQDEIKAQEANKASQNQPDESENDDPNDPPSTGAAPVPQIKLGPNGEIILDEQSLVIKQSNNGRKVSSEVREGAWNERSSGYRRSARTADWTHDETVRFYRALAAIGTDFTLMEPLFPGRTRRDLKLKFKKEEKLNIAQVDKALRSRVEWDAMGLHEEFKEERAEAAKREEEAKQRLEKQKKERQERNKELRGYRQSMSKKLLESSVLRCDLSNVDHTADDIIARASEFKSQKKRKPKKSIGQKPKPEPGPGSTSSLATLSVRNNRKTQESKNSVSDMAVITKIDPKPANMLLDNISNPSMPSNIETGSLVVLTVNDPNSPTKKMLQTYIAREKGKLLPVDLPPSLLNSVVGYVRKETTDSNASMVSSPMTSASPNSVASMDSRISVTPLQVNPSPNKRQRKNSYTITPL

Uniprot

A0A2H1V467 A0A2A4K687 A0A194RB87 A0A194QKH0 A0A212FGZ2

Pubmed

26354079 22118469

EMBL

ODYU01000592 SOQ35640.1 NWSH01000136 PCG79182.1 KQ460436 KPJ14754.1 + More
KQ459053 KPJ03956.1 AGBW02008579 OWR52999.1

Proteomes

UP000218220 UP000053240 UP000053268 UP000007151

Pfam

PF15963 Myb_DNA-bind_7

Interpro

IPR039467   TFIIIB_B''_Myb        + More
IPR009057   Homeobox-like_sf
IPR001005   SANT/Myb

SUPFAM

SSF46689 SSF46689

CDD

cd00167 SANT

ProteinModelPortal

A0A2H1V467 A0A2A4K687 A0A194RB87 A0A194QKH0 A0A212FGZ2

PDB

5N9G E-value=1.05599e-08, Score=146

KEGG

101747231 K15198 transcription factor TFIIIB component B'' | (RefSeq) transcription factor TFIIIB component B'

GO

GO:0000995 GO:0003677 GO:0000126 GO:0006813 GO:0016020 GO:0005216 GO:0006811 GO:0008152 GO:0016740 GO:0003707 GO:0006418 GO:0003824

Length:

805

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.02413

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00169

outside

1 - 805

Pi

262.854456

Theta

182.021363

Tajima's D

0.64455

CLR

0.491018

CSRT

0.556922153892305

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics