Silkworm Genome Informatics Database

Gene

KWMTBOMO11400

Annotation

PREDICTED:_uncharacterized_protein_LOC105386400_[Plutella_xylostella]

Location

Bomo_Chr19(+):4745686-4749896 View in EpiBrowser

Transcription factor

THAP

Location in the cell

Nuclear Reliability : 2.789

CDS

ATGCCGAGACGCTGTATATTAAAATGTGCACCAGAACCTGGTGTAAGGTTTCACGTATTTCCCAGCCTAGAGAGTAAACCTGAACGTTTTAAGGCATGGGTTCAAGCAATTGGAGGTAAACTGGATACCCCAGAGGACTATGAATACTACAGAAACCAACGCATATGTGATCGGCATTTTGCAAAAGAAAATAAAAACCGATACAATCGTGTGGACGCTTTGGGAGTTCCATCGCTTCATTTAATCGAAACTGATCTGGGAGAAAGAGAAAAAAATTCTTTAGGAGTAAGCTTTGCCTCCTCAGTACAAGAGACATTGAATTTGGATGTTATTGAACCTACAACTTCCAATGTCCTAGTTGAAGATATGATGACACGGAACAATCGTTTATCCTTGCGAAAATATAATATGTACCAAAGTCAAATCAAACAATTAAGGAAAAGAGTGAACACTTTTCAAAAAAGAGAAGATAACTTCAGGACAAGATTAGCAAATGCTGAAAAGATTACTGATGAATCTGCATTTAAAAGGATTGCCAAAAATATGACTCTGCCTGCAAAGATTTTTACGAATATGCAGTTTCGCACTACGTCAAAAAAACCGTCGGGCAGGAGATTTCTATTAGAAGAAAAAGTGCTATCATTAACACTCTACAAAAGAAGTCCCAAATGTTATTCAATGTTGTCCAGGTATTTTTCTTTACCAGCGCCTAAAACTTTGAAAAGACTTCTCAGTGAAATTAAATTGGGCCCTGGTATCAATACGATTGTTATGGAAAAATTAAAGAAAACTGTTAGTGAGCTCACCATGGAAGACCGCTTGTGCACTTTAATTTTTGATGAGATGTCTATAACCCCTCAGCTGCATTATGATGCAGCAAAAGACCAATTAAAAGGGTTCACAAGCCATGGACACAAATTAGCAGATCATGCCTTAGTTTTTATGGGATTACGCAATAATCTCCTCACCAAAGATATGTATTATAAAGACGATGAAGATAAAGGCAAAATCAAAAAAGTGAAGTGGGAATATTTCCAATTGCTGTATGAGGCTGACAAATCATATGGAGAGTTAAGATGCCTTCAGAAATTAACAGAGGAGCATGTTAATCCTGATAAAATTAAGAAGATGCGAGTGAAGGCAGCAACGCAACTGTTCAGTCACAGTGTGGCTGTAGCCACTGAGCATTTAACAGCCAGAGGGAATTTGCCACAGGAGTGCAGGGATATAATTCCAATTGTATTAATAATTGACAAATTATTTGACAGTTTAAATGGTAACACTTTTCATGTACCCAACGGAAAACTACATAAAGGGCCTGTTAAAAGGATGCTGGGCAAAGGACATACGTGTGTGGCTGGGTTCTTACCAAATGTTTGA

Protein

MPRRCILKCAPEPGVRFHVFPSLESKPERFKAWVQAIGGKLDTPEDYEYYRNQRICDRHFAKENKNRYNRVDALGVPSLHLIETDLGEREKNSLGVSFASSVQETLNLDVIEPTTSNVLVEDMMTRNNRLSLRKYNMYQSQIKQLRKRVNTFQKREDNFRTRLANAEKITDESAFKRIAKNMTLPAKIFTNMQFRTTSKKPSGRRFLLEEKVLSLTLYKRSPKCYSMLSRYFSLPAPKTLKRLLSEIKLGPGINTIVMEKLKKTVSELTMEDRLCTLIFDEMSITPQLHYDAAKDQLKGFTSHGHKLADHALVFMGLRNNLLTKDMYYKDDEDKGKIKKVKWEYFQLLYEADKSYGELRCLQKLTEEHVNPDKIKKMRVKAATQLFSHSVAVATEHLTARGNLPQECRDIIPIVLIIDKLFDSLNGNTFHVPNGKLHKGPVKRMLGKGHTCVAGFLPNV

Uniprot

A0A3S2LM91 A0A3S2NSI9 A0A2A4JPP6 X1XB84 A0A3S2PD30 A0A2A4JY71 + More
A0A2A4JYS8 J9L7T1 A0A2A4JZ58 A0A1Y1JZB1 A0A1Y1NI49 J9KEP3 A0A3S2LWA3 A0A1Y1KLF8 J9M9N1 A0A3S2TA47 A0A3S2LNK6 J9LCP7

Pubmed

28004739

EMBL

RSAL01003176 RVE40327.1 RSAL01000257 RVE43416.1 NWSH01000959 PCG73380.1 + More
ABLF02011758 ABLF02011759 RSAL01000093 RVE47945.1 NWSH01000363 PCG76967.1 PCG76969.1 ABLF02017696 PCG76968.1 GEZM01101736 JAV52346.1 GEZM01001796 JAV97521.1 ABLF02017444 RSAL01000161 RVE45426.1 GEZM01085096 JAV60236.1 ABLF02017692 ABLF02017693 RSAL01005638 RVE39985.1 RSAL01000885 RVE41073.1 ABLF02009194

Proteomes

UP000283053 UP000218220 UP000007819

Pfam

PF12017   Tnp_P_element        + More
PF05485   THAP
PF03564   DUF1759
PF04727   ELMO_CED12
PF05585   DUF1758

Interpro

IPR021896   Transposase_37        + More
IPR006612   THAP_Znf
IPR038441   THAP_Znf_sf
IPR006816   ELMO_dom
IPR001878   Znf_CCHC
IPR036875   Znf_CCHC_sf
IPR021109   Peptidase_aspartic_dom_sf
IPR008737   Peptidase_asp_put
IPR005312   DUF1759

SUPFAM

SSF57756 SSF57756

Gene 3D

3.30.40.180 2.40.70.10

ProteinModelPortal

A0A3S2LM91 A0A3S2NSI9 A0A2A4JPP6 X1XB84 A0A3S2PD30 A0A2A4JY71 + More
A0A2A4JYS8 J9L7T1 A0A2A4JZ58 A0A1Y1JZB1 A0A1Y1NI49 J9KEP3 A0A3S2LWA3 A0A1Y1KLF8 J9M9N1 A0A3S2TA47 A0A3S2LNK6 J9LCP7

KEGG

NA

GO

GO:0003677 GO:0004803 GO:0006313 GO:0003676 GO:0007018 GO:0030286 GO:0046034 GO:0032559 GO:0004812 GO:0006418 GO:0003824

Length:

459

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00133

Exp number, first 60 AAs:

0

Total prob of N-in:

0.00975

outside

1 - 459

Pi

174.676712

Theta

143.172958

Tajima's D

-0.584386

CLR

1.792526

CSRT

0.225838708064597

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics