Silkworm Genome Informatics Database

Gene

KWMTBOMO11399

Pre Gene Modal

BGIBMGA001951

Annotation

putative_ubiquitin-conjugating_enzyme_morgue_[Danaus_plexippus]

Location

Bomo_Chr19(-):4741237-4743845 View in EpiBrowser

Location in the cell

Nuclear Reliability : 2.745

CDS

ATGACTGCTATAGGTCCGGAATTCATTGACTATATAAAGAAGTTAGAAGATAACTGTGACAAACTAGTGACTTCATATGAACAACCATTTGATTTTGAGTATGATAATTCAACATGTCATGTCTGTAATGGATATTATGGCCCTAGTTTTGGGGAACCAGTCTGCGTCACTTGCCATGCTTTTCTATTCCCTGATTTTCCATCATACCTTCCAACTTCCTACTTCTGTACTGAAAAAACAGATGATGGTGATTCTGGCAATGATGAACCTTCGGATCTCAACTACAGCTCTGAAAGGAGGTTACATAGAACATGTACATTGCCAGCTTGGTGGTATTATAGGAACTCGTTAGACAGTGAGACAAGTCCTGAAGATGAGGTAAGCAGGGCTAGCAACTCAGGCCCGGGTGCAAGCAGTAGCAGTTCAATGTCAGACCGTGCGGTGCAAGCACCCCCACCGCCTCCTCCACCAATTCCGAGTCTTGCGCGATCTTTACACGCCCTTTCAACACCACGGCCACCTGATAATTTAGCTCCAGGACTAGTTGAACATTTACCATCAGAAGGTATATTAGCCATTTCAACCCAATAG

Protein

MTAIGPEFIDYIKKLEDNCDKLVTSYEQPFDFEYDNSTCHVCNGYYGPSFGEPVCVTCHAFLFPDFPSYLPTSYFCTEKTDDGDSGNDEPSDLNYSSERRLHRTCTLPAWWYYRNSLDSETSPEDEVSRASNSGPGASSSSSMSDRAVQAPPPPPPPIPSLARSLHALSTPRPPDNLAPGLVEHLPSEGILAISTQ

Uniprot

H9IXG8 A0A212EM61 A0A0N0PBY1 A0A194QG97 A0A3S2NRI9 A0A1B6EQ53 + More
A0A1B6EM13 A0A1B6CVT3 A0A1B6C8V9 E0VAU1 A0A131XDZ0

Pubmed

19121390 22118469 26354079 20566863 28049606

EMBL

BABH01018127 AGBW02013910 OWR42567.1 KQ460772 KPJ12461.1 KQ459053 + More
KPJ03980.1 RSAL01000004 RVE54539.1 GECZ01029715 GECZ01010228 JAS40054.1 JAS59541.1 GECZ01030808 GECZ01029610 JAS38961.1 JAS40159.1 GEDC01019863 JAS17435.1 GEDC01027539 JAS09759.1 DS235015 EEB10497.1 GEFH01003362 JAP65219.1

Proteomes

UP000005204 UP000007151 UP000053240 UP000053268 UP000283053 UP000009046 + More

PRIDE

H9IXG8

Pfam

PF00179 UQ_con + More
PF12937 F-box-like

Interpro

IPR036047   F-box-like_dom_sf        + More
IPR000608   UBQ-conjugat_E2
IPR016135   UBQ-conjugating_enzyme/RWD
IPR001810   F-box_dom

SUPFAM

SSF81383 SSF81383 + More
SSF54495 SSF54495

Gene 3D

3.10.110.10

CDD

cd00195 UBCc

ProteinModelPortal

H9IXG8 A0A212EM61 A0A0N0PBY1 A0A194QG97 A0A3S2NRI9 A0A1B6EQ53 + More
A0A1B6EM13 A0A1B6CVT3 A0A1B6C8V9 E0VAU1 A0A131XDZ0

KEGG

101737130 no KO assigned | (RefSeq) uncharacterized LOC101737130

GO

GO:0016874

Length:

196

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00918

Exp number, first 60 AAs:

0.00735

Total prob of N-in:

0.02883

outside

1 - 196

Pi

228.757804

Theta

171.691187

Tajima's D

1.15671

CLR

0.015646

CSRT

0.700314984250787

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics