Silkworm Genome Informatics Database

Gene

KWMTBOMO11397 Validated by peptides from experiments

Pre Gene Modal

BGIBMGA001870

Annotation

PREDICTED:_splicing_regulatory_glutamine/lysine-rich_protein_1_[Amyelois_transitella]

Location

Bomo_Chr19(+):4727256-4731572 View in EpiBrowser

Location in the cell

Nuclear Reliability : 4.388

CDS

ATGGTGTCTGGGAGCACGAGGGTGATACAAGTGACCAACATCGCGCCTCAAGCGACTAAAGACCAGATGCAGACGCTATTCGGCTATTTGGGTAAAATCGACGACATCCGCTTGTATCCAACGATCAGAGACGTTTCGTGTCCCGTACAGTCCCGCATCTGTTACGTAAAATATTATGACTCTGCAAACGTAAATGTGGCACAGCATATGACTAACACTGTATTCATAGACCGCGCACTGATTGTGATACCGGTGCAGTCGGGTGAGATACCAGATGAACACAAAGCGCTCGAAATGTCCAGTAATGGAACCTTGGTACCGGGGTTAAGTTCTGTAGAACCAAGACTGCCCATGCATGTCATCAATACTTTGGATGGAATCCCGCCGAACCAAGTCATTCAAACGCACGACGCTAATTTGACAGCAGCTGGTTTGCCTCCATATCCCCCTTTGCCAACCACATATGACTCTAGAAAAATAGAAGAAATCAGAAGAACAGTCCTAGTGGCTGATACGGGTTCATTAACTTCCCAACAGTTGATTGATCACTTCTGCCAGGCAGGTGAAGTGAAGTATATGCGCTTCTGCAGCAGAGATGTTGACACCCTCAAGTATGCTCTTATTGAGATGACTGAGCAGGAAGCTGTGATCAAAGCATTGCACCTAAATGGATCCACTTTGGACGGACAAACTATTCAGGTATATCATGCTACGCAATCAATATGCAAACCGCAAACAAAAAGCAATGAGGCTGCCCAACGTGAAATAGAAGAAGCTATGTGCAGAGTGAAGGAAGCACAGAATTTTATATCAGCAGCCATTGATCCTGTCATCGGATTACTGTCTAAAGACAAGAGAAGGTCTCGTTCCCGACATCGCAGTTCCCGTCGTTCCCGCTCCCGGTCTCGGCACCACAGCTCGCGTTCGAAGAAGGAACGCTCTAAAGATCGCGACCGGAAAGATAGGAAAGGCTCTACAGAAAAAGATAAAGAGAAAGAGAAAGAAAAACGAGAAAAAACCAAATCACCTCCTCCTAAGGCAATAGAAAAAGAAACGAAAGAAGAACAAAAGCCAGAAATTACTGAAACGAATGGTACTAGTCCAGAATTAAAGTCGAAGGCTTCCACTCCTCCTGATGATAAAGAACGGGAGAACGAGAAAAGTGAAAAAGAGAAGGTGAAAGAGAAAGAGAAAGAAAAGTCTCCATCTAAAAAGAAAGAACGTTCCCGTTCACGGGACAAGAAGAAGGAGCGGTCGCGGTCGCGACGCAGATCCCGATCCCGCTCCCGTCGTAAACGTTCTAGATCTCGGAAGCGATCTCGTTCCAGAGAGCGGAAAAGAACGCGCTCCAGAGAAAGAAAGAGATCGAGATCCAAAAAACGGTCCCGGTCACGAGATCGCAAGAGATCTAGGTCCAGGGACAGAAAGAAGTCTAAATCTAGAGAAAGGAAGCGGTCTAGGTCGCGTGATCGCAAGCGGTCTCGCTCCCACAGTCGCCGCTCCAAGAGTCGTTCTCACAGAGATTCCAAAACACCCCACGATAATAAGTCACGCGACAGAACTCCCACTCTTCCTCCTTTACCGGATAAAAGCGTTCCAATAATTGAGAAGGCTCCAGATATAAATGATGAAAATACATCTCCAGATAATATGGATATTTCAGATTCTCCTTAG

Protein

MVSGSTRVIQVTNIAPQATKDQMQTLFGYLGKIDDIRLYPTIRDVSCPVQSRICYVKYYDSANVNVAQHMTNTVFIDRALIVIPVQSGEIPDEHKALEMSSNGTLVPGLSSVEPRLPMHVINTLDGIPPNQVIQTHDANLTAAGLPPYPPLPTTYDSRKIEEIRRTVLVADTGSLTSQQLIDHFCQAGEVKYMRFCSRDVDTLKYALIEMTEQEAVIKALHLNGSTLDGQTIQVYHATQSICKPQTKSNEAAQREIEEAMCRVKEAQNFISAAIDPVIGLLSKDKRRSRSRHRSSRRSRSRSRHHSSRSKKERSKDRDRKDRKGSTEKDKEKEKEKREKTKSPPPKAIEKETKEEQKPEITETNGTSPELKSKASTPPDDKERENEKSEKEKVKEKEKEKSPSKKKERSRSRDKKKERSRSRRRSRSRSRRKRSRSRKRSRSRERKRTRSRERKRSRSKKRSRSRDRKRSRSRDRKKSKSRERKRSRSRDRKRSRSHSRRSKSRSHRDSKTPHDNKSRDRTPTLPPLPDKSVPIIEKAPDINDENTSPDNMDISDSP

Uniprot

NA

ProteinModelPortal

NA

KEGG

101737273 K13165 splicing factor, arginine/serine-rich 12 | (RefSeq) probable splicing factor, arginine/serine

GO

GO:0003676 GO:0000166 GO:0003777 GO:0007018 GO:0030286 GO:0046034 GO:0032559 GO:0004812 GO:0006418 GO:0003824

Length:

557

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00182

Exp number, first 60 AAs:

2e-05

Total prob of N-in:

0.00175

outside

1 - 557

Pi

243.529088

Theta

230.557709

Tajima's D

-1.027573

CLR

0.241474

CSRT

0.132743362831858

Interpretation

Uncertain

Sequence

Summary

Ontologies

Topology

Population Genetic Test Statistics