Gene

KWMTBOMO11386

Pre Gene Modal

BGIBMGA001956

Annotation

PREDICTED:_calcium_and_integrin-binding_protein_1-like_[Papilio_xuthus]

Location

Bomo_Chr19(-):4535311-4539696      View in EpiBrowser

Location in the cell

Cytoplasmic   Reliability : 2.051 Nuclear   Reliability : 1.821

CDS

ATGGGTAACGCTAAATCCTATCCAGGTCTTACACAAGACGTTTTGGAAGACTACACTAATCTAACCTATTTGAGTAAGGGCGAAATATTACATTTGATGAAGAAATTTTATTCGATAAATCCTGATAAATTGGAGGCTGACTATCAATACAGGTTCAGTAAAGAAGACATTGTGAATAAATTTGAAGTTTTAAGGAACAATCCCTTTCAAGATCGTCTTTTCCGAGTGTTCTCCTCGCACGACGATGGCCGTTTCTCATTTGAAGACTTATTGGATCTGTGCTCAGCGATGTGTCCGGAATGTCCACTTGAAGTAAAAGCTGCGTGGGCGTTTAAAGTTTTTGATCTGGACGATGACAACCAAATATCAGCGAAGGATATTTGCCAGATTATAGACCGACTCACTTGGACTGGAAATAATCGTTCGAATTTCCTCGATCGCGAATCAAAAGCAAAGATAGCCGAAATTATCTTGGAAGAAACAAAATTGGACAGCAGCGGCAGTATCGGCCTAAGCGAATTTAAAATTATGATGTCCAGGATACCGGAGTTTTCATCGTCTTTTTACTTTAAATTATGA

Protein

MGNAKSYPGLTQDVLEDYTNLTYLSKGEILHLMKKFYSINPDKLEADYQYRFSKEDIVNKFEVLRNNPFQDRLFRVFSSHDDGRFSFEDLLDLCSAMCPECPLEVKAAWAFKVFDLDDDNQISAKDICQIIDRLTWTGNNRSNFLDRESKAKIAEIILEETKLDSSGSIGLSEFKIMMSRIPEFSSSFYFKL

Uniprot

A0A212ELE4   A0A2A4K9P4   A0A194QXA8   A0A2H1WIM8   A0A437BBF5   H9IXH3   + More
S4P4M9   A0A194QEU2   A0A0C9PTF8   A0A1B0CPA9   B0WCB9   B0XBR8   A0A1W4XAQ7   A0A3L8DZB2   D6WTX7   A0A1L8DMK1   A0A182GM59   A0A1Q3FLD0   E2BDG8   J3JTF5   A0A182JRH6   Q16IF9   A0A182UUZ4   A0A182XU73   A0A453YN33   A0A2C9GQQ8   F5HLW7   A0A195E039   Q16U34   A0A158P0M0   V5GQP3   A0A182PM40   A0A182TW19   A0A084VZ89   A0A182Y0Z4   A0A182NM20   V5HUP5   A0A182M0G5   W5JU57   A0A023GI40   G3MLE8   A0A1E1X186   G3MLE7   A0A131Y4H3   A0A1E1XRN3   A0A1Y1NFR2   A0A131YFE6   A0A0T6B3S2   A0A1Y1NE65   A0A131XIU7   L7M4N1   N6TRW6   A0A026WPB5   A0A151XJJ1   A0A2R5LHE0   A0A1S3J1J5   A0A131YQK2   A0A2P8YAR2   E9GS16   A0A182SJ31   A0A1I8JSQ1   V4BCP0   A0A293MZ19   A0A1S3J206   A0A0L7QV53   A0A1Q3FGD1   A0A023EI62   A0A0P5J488   A0A1S3J360   A0A210Q6W0   Q17IW0   A0A3L8DQV1   A0A2A3EML9   A0A088ADJ0   A0A1B0GMU7   A0A1B0GKG0   A0A3S0Z8T1   C3ZD32   A0A0B7BKM3   A0A1L8DW92   A0A210PED7   B0W8S6   A0A088AJL7   A0A224YIX4   L7M3K6   A0A131YX25   R7T7Q4   A0A0P4VSZ7   T1HPB1   K4GG65   E2AUN1   A0A0K8R8E5   A0A1E1XQU4   U5EZE3   A0A0C9S1C7   A0A023GIU1   A0A158P2Z9  

Pubmed

22118469    26354079    19121390    23622113    30249741    18362917    + More
19820115    26483478    20798317    22516182    23537049    17510324    20966253    12364791    14747013    17210077    21347285    24438588    25244985    25765539    20920257    23761445    22216098    28503490    29209593    28004739    26830274    28049606    25576852    24508170    29403074    21292972    23254933    24945155    28812685    18563158    28797301    27129103    23056606    26131772   

EMBL

AGBW02014073    OWR42305.1    NWSH01000016    PCG80799.1    KQ461073    KPJ09590.1    + More
ODYU01008923    SOQ52925.1    RSAL01000096    RVE47747.1    BABH01018140    BABH01018141    BABH01018142    GAIX01005899    JAA86661.1    KQ459053    KPJ03997.1    GBYB01004653    GBYB01004654    JAG74420.1    JAG74421.1    AJWK01021639    DS231886    EDS43364.1    DS232648    EDS44417.1    QOIP01000003    RLU25279.1    KQ971352    EFA07348.1    GFDF01006479    JAV07605.1    JXUM01073887    KQ562799    KXJ75102.1    GFDL01006723    JAV28322.1    GL447620    EFN86280.1    BT126511    KB632281    AEE61475.1    ERL91344.1    CH478080    EAT34050.1    APCN01004294    AAAB01008960    EGK97278.1    KQ979955    KYN18466.1    CH477632    EAT38051.1    ADTU01005349    GALX01002017    JAB66449.1    ATLV01018617    KE525239    KFB43283.1    GANP01004566    JAB79902.1    AXCM01002827    ADMH02000483    ETN66294.1    GBBM01002720    JAC32698.1    JO842699    AEO34316.1    GFAC01006377    JAT92811.1    JO842698    AEO34315.1    GEFM01002840    JAP72956.1    GFAA01001466    JAU01969.1    GEZM01009565    JAV94517.1    GEDV01011377    JAP77180.1    LJIG01015969    KRT82008.1    GEZM01009566    JAV94516.1    GEFH01001518    JAP67063.1    GACK01006202    JAA58832.1    APGK01054091    KB741247    ENN72005.1    KK107139    EZA57860.1    KQ982074    KYQ60511.1    GGLE01004709    MBY08835.1    GEDV01007797    JAP80760.1    PYGN01000749    PSN41347.1    GL732561    EFX77623.1    KB199650    ESP05466.1    GFWV01020651    MAA45379.1    KQ414730    KOC62439.1    GFDL01008436    JAV26609.1    GAPW01004816    JAC08782.1    GDIQ01203420    JAK48305.1    NEDP02004772    OWF44461.1    CH477236    EAT46633.1    QOIP01000005    RLU22563.1    KZ288206    PBC33053.1    AJVK01004164    AJWK01028824    RQTK01001681    RUS69442.1    GG666611    EEN49543.1    HACG01047024    CEK93889.1    GFDF01003395    JAV10689.1    NEDP02076749    OWF34844.1    DS231860    EDS39305.1    GFPF01006462    MAA17608.1    GACK01006434    JAA58600.1    GEDV01005040    JAP83517.1    AMQN01014763    AMQN01014764    KB311248    ELT89640.1    GDKW01000970    JAI55625.1    ACPB03014848    JX052466    JX210749    JX210974    JX211102    JX212336    AFK10694.1    AFM89063.1    AFM90650.1    GL442829    EFN62878.1    GADI01006371    JAA67437.1    GFAA01001759    JAU01676.1    GANO01000952    JAB58919.1    GBZX01002161    JAG90579.1    GBBM01002728    JAC32690.1    ADTU01007655   

Proteomes

UP000007151    UP000218220    UP000053240    UP000283053    UP000005204    UP000053268    + More
UP000092461    UP000002320    UP000192223    UP000279307    UP000007266    UP000069940    UP000249989    UP000008237    UP000030742    UP000075881    UP000008820    UP000075903    UP000076407    UP000075882    UP000075840    UP000007062    UP000078492    UP000005205    UP000075885    UP000075902    UP000030765    UP000076408    UP000075884    UP000075883    UP000000673    UP000019118    UP000053097    UP000075809    UP000085678    UP000245037    UP000000305    UP000075901    UP000069272    UP000030746    UP000053825    UP000242188    UP000242457    UP000005203    UP000092462    UP000271974    UP000001554    UP000014760    UP000015103    UP000000311   

PRIDE

H9IXH3   

Pfam

PF13499   EF-hand_7

Interpro

IPR011992   EF-hand-dom_pair        + More
IPR002048   EF_hand_dom       
IPR018247   EF_Hand_1_Ca_BS       
IPR015943   WD40/YVTN_repeat-like_dom_sf       
IPR039328   WDR89       
IPR001680   WD40_repeat       
IPR036322   WD40_repeat_dom_sf       
IPR017986   WD40_repeat_dom       

SUPFAM

SSF47473   SSF47473        + More
SSF50978   SSF50978       

Gene 3D

2.130.10.10    

CDD

cd00051  EFh

ProteinModelPortal

A0A212ELE4   A0A2A4K9P4   A0A194QXA8   A0A2H1WIM8   A0A437BBF5   H9IXH3   + More
S4P4M9   A0A194QEU2   A0A0C9PTF8   A0A1B0CPA9   B0WCB9   B0XBR8   A0A1W4XAQ7   A0A3L8DZB2   D6WTX7   A0A1L8DMK1   A0A182GM59   A0A1Q3FLD0   E2BDG8   J3JTF5   A0A182JRH6   Q16IF9   A0A182UUZ4   A0A182XU73   A0A453YN33   A0A2C9GQQ8   F5HLW7   A0A195E039   Q16U34   A0A158P0M0   V5GQP3   A0A182PM40   A0A182TW19   A0A084VZ89   A0A182Y0Z4   A0A182NM20   V5HUP5   A0A182M0G5   W5JU57   A0A023GI40   G3MLE8   A0A1E1X186   G3MLE7   A0A131Y4H3   A0A1E1XRN3   A0A1Y1NFR2   A0A131YFE6   A0A0T6B3S2   A0A1Y1NE65   A0A131XIU7   L7M4N1   N6TRW6   A0A026WPB5   A0A151XJJ1   A0A2R5LHE0   A0A1S3J1J5   A0A131YQK2   A0A2P8YAR2   E9GS16   A0A182SJ31   A0A1I8JSQ1   V4BCP0   A0A293MZ19   A0A1S3J206   A0A0L7QV53   A0A1Q3FGD1   A0A023EI62   A0A0P5J488   A0A1S3J360   A0A210Q6W0   Q17IW0   A0A3L8DQV1   A0A2A3EML9   A0A088ADJ0   A0A1B0GMU7   A0A1B0GKG0   A0A3S0Z8T1   C3ZD32   A0A0B7BKM3   A0A1L8DW92   A0A210PED7   B0W8S6   A0A088AJL7   A0A224YIX4   L7M3K6   A0A131YX25   R7T7Q4   A0A0P4VSZ7   T1HPB1   K4GG65   E2AUN1   A0A0K8R8E5   A0A1E1XQU4   U5EZE3   A0A0C9S1C7   A0A023GIU1   A0A158P2Z9  

PDB

2LM5     E-value=3.70312e-22,     Score=255

KEGG

101746738    no KO assigned | (RefSeq) calcium and integrin-binding protein 1-like

GO

GO:0005509   GO:0007229   GO:0016301   GO:0007018   GO:0030286   GO:0016791   GO:0016620   GO:0046034   GO:0032559   GO:0004812   GO:0006418   GO:0003824  

PANTHER

PTHR22889  

Length:

192

Number of predicted TMHs:

0

Exp number of AAs in TMHs:

0.00026

Exp number, first 60 AAs:

0.00018

Total prob of N-in:

0.05229

outside

1  -  192

 

 

Pi

187.460031

Theta

183.180408

Tajima's D

0.742318

CLR

0.06208

CSRT

0.589570521473926

Interpretation

Uncertain